Lcy03g005540 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g005540
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUlp1-like peptidase
LocationChr03: 30130517 .. 30130831 (+)
RNA-Seq ExpressionLcy03g005540
SyntenyLcy03g005540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCATGTTAGGAGGGATGTTGTAATCAGTAGACTTAGAGCCTTATATTTAGGAGATAATGAGGCAATGAAAGGTGATGAATTGGATAAACTGTTCCCGACAATTGAGTTCCAGAGTGACGAAGATGCAGTTAAAATTGCCATTTTCTATTTTATTGAGTTGGTTATGATGGGGAGGGAGCGAAAACAACAGATGGATACGTCCATGCTTGACATAATCGATGACGAGGAGAGTTTTTGCAATGAGGATTGGAGTACATTGATATTCCAGAAAACTATTAGAAGCCTTAAAAAAGCATTGAAGGGAAGTTGA

mRNA sequence

ATGAGGCATGTTAGGAGGGATGTTGTAATCAGTAGACTTAGAGCCTTATATTTAGGAGATAATGAGGCAATGAAAGGTGATGAATTGGATAAACTGTTCCCGACAATTGAGTTCCAGAGTGACGAAGATGCAGTTAAAATTGCCATTTTCTATTTTATTGAGTTGGTTATGATGGGGAGGGAGCGAAAACAACAGATGGATACGTCCATGCTTGACATAATCGATGACGAGGAGAGTTTTTGCAATGAGGATTGGAGTACATTGATATTCCAGAAAACTATTAGAAGCCTTAAAAAAGCATTGAAGGGAAGTTGA

Coding sequence (CDS)

ATGAGGCATGTTAGGAGGGATGTTGTAATCAGTAGACTTAGAGCCTTATATTTAGGAGATAATGAGGCAATGAAAGGTGATGAATTGGATAAACTGTTCCCGACAATTGAGTTCCAGAGTGACGAAGATGCAGTTAAAATTGCCATTTTCTATTTTATTGAGTTGGTTATGATGGGGAGGGAGCGAAAACAACAGATGGATACGTCCATGCTTGACATAATCGATGACGAGGAGAGTTTTTGCAATGAGGATTGGAGTACATTGATATTCCAGAAAACTATTAGAAGCCTTAAAAAAGCATTGAAGGGAAGTTGA

Protein sequence

MRHVRRDVVISRLRALYLGDNEAMKGDELDKLFPTIEFQSDEDAVKIAIFYFIELVMMGRERKQQMDTSMLDIIDDEESFCNEDWSTLIFQKTIRSLKKALKGS
Homology
BLAST of Lcy03g005540 vs. ExPASy TrEMBL
Match: A0A6J1DRZ7 (uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023847 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.9e-22
Identity = 59/102 (57.84%), Postives = 74/102 (72.55%), Query Frame = 0

Query: 1   MRHVRRDVVISRLRALYLGDNEAMKGDELDKLFPTIEFQSDEDAVKIAIFYFIELVMMGR 60
           M  V  DV   RLR LY  D  ++K  EL+K+F    F++DEDAVKIAI YFIEL MMG+
Sbjct: 104 MNRVDEDVRNRRLRILYFQDKASVKCSELEKIFLEHTFENDEDAVKIAIVYFIELAMMGK 163

Query: 61  ERKQQMDTSMLDIIDDEESFCNEDWSTLIFQKTIRSLKKALK 103
           ERK +MDTS+L I+D  E FCN DWS++IF++T+ SLK ALK
Sbjct: 164 ERKLKMDTSLLGIVDRWEVFCNYDWSSMIFERTLWSLKNALK 205

BLAST of Lcy03g005540 vs. ExPASy TrEMBL
Match: A0A6J1DM82 (uncharacterized protein LOC111022300 OS=Momordica charantia OX=3673 GN=LOC111022300 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 6.6e-19
Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 0

Query: 1   MRHVRRDVVISRLRALYLGDNEAMKGDELDKLFPTIEFQSDEDAVKIAIFYFIELVMMGR 60
           M  V  D+   RLRA Y  D+  +K  EL+K+F    F  DEDAVK+ I YF+EL MMG+
Sbjct: 104 MIRVDNDIPGRRLRARYFKDSVRVKCSELEKIFMETVFYDDEDAVKVGIVYFVELAMMGK 163

Query: 61  ERKQQMDTSMLDIIDDEESFCNEDWSTLIFQKTIRSLKKAL 102
           ERKQ +D ++L ++D  E FCN DWS+LIF++T+ SLK A+
Sbjct: 164 ERKQFIDATLLGVVDRWELFCNHDWSSLIFERTLWSLKNAV 204

BLAST of Lcy03g005540 vs. ExPASy TrEMBL
Match: A0A6J1DL69 (uncharacterized protein LOC111022139 OS=Momordica charantia OX=3673 GN=LOC111022139 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 8.7e-19
Identity = 53/94 (56.38%), Postives = 67/94 (71.28%), Query Frame = 0

Query: 1   MRHVRRDVVISRLRALYLGDNEAMKGDELDKLFPTIEFQSDEDAVKIAIFYFIELVMMGR 60
           M  V  DV   RLR LY  D  ++K  EL+K+F    F++DEDAVKIAI YFIEL MMG+
Sbjct: 141 MNRVYDDVHNRRLRILYFQDKASVKCSELEKIFLEHTFKNDEDAVKIAIVYFIELAMMGK 200

Query: 61  ERKQQMDTSMLDIIDDEESFCNEDWSTLIFQKTI 95
           ERKQ+MDTS+L I+D  E FCN DWS++I + T+
Sbjct: 201 ERKQKMDTSLLGIVDRWEVFCNYDWSSMISEMTL 234

BLAST of Lcy03g005540 vs. ExPASy TrEMBL
Match: A0A6J1DJX9 (uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020757 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.5e-18
Identity = 53/102 (51.96%), Postives = 67/102 (65.69%), Query Frame = 0

Query: 1   MRHVRRDVVISRLRALYLGDNEAMKGDELDKLFPTIEFQSDEDAVKIAIFYFIELVMMGR 60
           M  V   +   RLRA Y  D   +K  EL+K+F    F  DED VK+ I YFIEL MMG+
Sbjct: 104 MNRVDNHIPGRRLRARYFKDGVRVKCSELEKIFLEDVFYDDEDVVKVRIVYFIELAMMGK 163

Query: 61  ERKQQMDTSMLDIIDDEESFCNEDWSTLIFQKTIRSLKKALK 103
           ERKQ +DT++L ++D  E FCN DWS++IF +TI SLK ALK
Sbjct: 164 ERKQFIDTALLGVVDRWEVFCNYDWSSMIFDRTIWSLKNALK 205

BLAST of Lcy03g005540 vs. ExPASy TrEMBL
Match: A0A0A0L7D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G379230 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.8e-17
Identity = 47/78 (60.26%), Postives = 58/78 (74.36%), Query Frame = 0

Query: 12 RLRALYLGDNEAMKGDELDKLFPTIEFQSDEDAVKIAIFYFIELVMMGRERKQQMDTSML 71
          RLR LYLGD   M G ELDK + T+ F+SDED VKI++FYF+EL M+GRER+Q MD +ML
Sbjct: 15 RLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAMIGRERRQHMDWTML 74

Query: 72 DIIDDEESFCNEDWSTLI 90
           +IDD E F + DW  LI
Sbjct: 75 GVIDDLEDFVSYDWGELI 92

BLAST of Lcy03g005540 vs. NCBI nr
Match: XP_022157020.1 (uncharacterized protein LOC111023847 [Momordica charantia])

HSP 1 Score: 114.4 bits (285), Expect = 5.9e-22
Identity = 59/102 (57.84%), Postives = 74/102 (72.55%), Query Frame = 0

Query: 1   MRHVRRDVVISRLRALYLGDNEAMKGDELDKLFPTIEFQSDEDAVKIAIFYFIELVMMGR 60
           M  V  DV   RLR LY  D  ++K  EL+K+F    F++DEDAVKIAI YFIEL MMG+
Sbjct: 104 MNRVDEDVRNRRLRILYFQDKASVKCSELEKIFLEHTFENDEDAVKIAIVYFIELAMMGK 163

Query: 61  ERKQQMDTSMLDIIDDEESFCNEDWSTLIFQKTIRSLKKALK 103
           ERK +MDTS+L I+D  E FCN DWS++IF++T+ SLK ALK
Sbjct: 164 ERKLKMDTSLLGIVDRWEVFCNYDWSSMIFERTLWSLKNALK 205

BLAST of Lcy03g005540 vs. NCBI nr
Match: XP_022155158.1 (uncharacterized protein LOC111022300 [Momordica charantia])

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-18
Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 0

Query: 1   MRHVRRDVVISRLRALYLGDNEAMKGDELDKLFPTIEFQSDEDAVKIAIFYFIELVMMGR 60
           M  V  D+   RLRA Y  D+  +K  EL+K+F    F  DEDAVK+ I YF+EL MMG+
Sbjct: 104 MIRVDNDIPGRRLRARYFKDSVRVKCSELEKIFMETVFYDDEDAVKVGIVYFVELAMMGK 163

Query: 61  ERKQQMDTSMLDIIDDEESFCNEDWSTLIFQKTIRSLKKAL 102
           ERKQ +D ++L ++D  E FCN DWS+LIF++T+ SLK A+
Sbjct: 164 ERKQFIDATLLGVVDRWELFCNHDWSSLIFERTLWSLKNAV 204

BLAST of Lcy03g005540 vs. NCBI nr
Match: XP_022154995.1 (uncharacterized protein LOC111022139 [Momordica charantia])

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18
Identity = 53/94 (56.38%), Postives = 67/94 (71.28%), Query Frame = 0

Query: 1   MRHVRRDVVISRLRALYLGDNEAMKGDELDKLFPTIEFQSDEDAVKIAIFYFIELVMMGR 60
           M  V  DV   RLR LY  D  ++K  EL+K+F    F++DEDAVKIAI YFIEL MMG+
Sbjct: 141 MNRVYDDVHNRRLRILYFQDKASVKCSELEKIFLEHTFKNDEDAVKIAIVYFIELAMMGK 200

Query: 61  ERKQQMDTSMLDIIDDEESFCNEDWSTLIFQKTI 95
           ERKQ+MDTS+L I+D  E FCN DWS++I + T+
Sbjct: 201 ERKQKMDTSLLGIVDRWEVFCNYDWSSMISEMTL 234

BLAST of Lcy03g005540 vs. NCBI nr
Match: XP_022153201.1 (uncharacterized protein LOC111020757 [Momordica charantia])

HSP 1 Score: 102.1 bits (253), Expect = 3.1e-18
Identity = 53/102 (51.96%), Postives = 67/102 (65.69%), Query Frame = 0

Query: 1   MRHVRRDVVISRLRALYLGDNEAMKGDELDKLFPTIEFQSDEDAVKIAIFYFIELVMMGR 60
           M  V   +   RLRA Y  D   +K  EL+K+F    F  DED VK+ I YFIEL MMG+
Sbjct: 104 MNRVDNHIPGRRLRARYFKDGVRVKCSELEKIFLEDVFYDDEDVVKVRIVYFIELAMMGK 163

Query: 61  ERKQQMDTSMLDIIDDEESFCNEDWSTLIFQKTIRSLKKALK 103
           ERKQ +DT++L ++D  E FCN DWS++IF +TI SLK ALK
Sbjct: 164 ERKQFIDTALLGVVDRWEVFCNYDWSSMIFDRTIWSLKNALK 205

BLAST of Lcy03g005540 vs. NCBI nr
Match: KGN57895.1 (hypothetical protein Csa_010434 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 5.8e-17
Identity = 47/78 (60.26%), Postives = 58/78 (74.36%), Query Frame = 0

Query: 12 RLRALYLGDNEAMKGDELDKLFPTIEFQSDEDAVKIAIFYFIELVMMGRERKQQMDTSML 71
          RLR LYLGD   M G ELDK + T+ F+SDED VKI++FYF+EL M+GRER+Q MD +ML
Sbjct: 15 RLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAMIGRERRQHMDWTML 74

Query: 72 DIIDDEESFCNEDWSTLI 90
           +IDD E F + DW  LI
Sbjct: 75 GVIDDLEDFVSYDWGELI 92

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DRZ72.9e-2257.84uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DM826.6e-1950.50uncharacterized protein LOC111022300 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DL698.7e-1956.38uncharacterized protein LOC111022139 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DJX91.5e-1851.96uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A0A0L7D52.8e-1760.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G379230 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022157020.15.9e-2257.84uncharacterized protein LOC111023847 [Momordica charantia][more]
XP_022155158.11.4e-1850.50uncharacterized protein LOC111022300 [Momordica charantia][more]
XP_022154995.11.8e-1856.38uncharacterized protein LOC111022139 [Momordica charantia][more]
XP_022153201.13.1e-1851.96uncharacterized protein LOC111020757 [Momordica charantia][more]
KGN57895.15.8e-1760.26hypothetical protein Csa_010434 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015410Domain of unknown function DUF1985PFAMPF09331DUF1985coord: 17..96
e-value: 3.6E-9
score: 36.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g005540.1Lcy03g005540.1mRNA