Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTGTTGGCTGACAATCTCTCGGTGAAGCACCTAAGCTTCATGAGTTCTGATCACAGACCTATTGTGATTAATTGGACTTTTAAGGGGGATAAGGGAGGAAGCCAGAAAAGGAGTTCTCTGTTGAGGTTTGAAGAGGGATGGCTGAAGTTCAAAGAGACTGAAGAGGTGGTTATGAAGAGTTGGGAGGAGCATGGGAGGTTTGATGCCAATCAGTTGTGCCATAGCCTAAGGAGATGCATCCAAAATTTACATCAATGGAGTAAAAACAGGCTCAAAGGTAACCTGAAGAATGCTATAGCTCGGAAGGAAAGGGAAATTCAACAAATGACGGATGATGATTTTGAAGAAAAGATGGAAGATATATTACAAGCTGAAACTGAACTTGAAATACTGCTGGGGGAAGAAGAAGATTATTGGAGGTGTCGGTCTAAAGAAACGTGGCTCCAAAGCGGGGATAGAAATACCAAATGGTTCCATTCTAAAGCCTCTCTGAGGAAATCGAGAAATCATATTGATGGAATCTTATCCAAGGAAGGAATTTGGGAAGAGGATGAGGATATGATTGGTTCGATTGCAACTGAGTATTTCAAGGACCTCTTTCAGTCTTCGAGGCCTGTCAATAGATCGATTGTAGAGTTTTTAGAGGGGATCTCGCGGAAGATTACGGACCAGCAAAGAATTGATTTAGACAAGTCGTACACTAGAGAAGAGATCGAGGCCACTATTAAAAGTTTGAATCTTAGCAAAGCTCCGGGATATGATGGGATTCACGCCTCCTTTATCCAATCTTACTAG
mRNA sequence
ATGGAGTTGTTGGCTGACAATCTCTCGGTGAAGCACCTAAGCTTCATGAGTTCTGATCACAGACCTATTGTGATTAATTGGACTTTTAAGGGGGATAAGGGAGGAAGCCAGAAAAGGAGTTCTCTGTTGAGGTTTGAAGAGGGATGGCTGAAGTTCAAAGAGACTGAAGAGGTGGTTATGAAGAGTTGGGAGGAGCATGGGAGGTTTGATGCCAATCAGTTGTGCCATAGCCTAAGGAGATGCATCCAAAATTTACATCAATGGAGTAAAAACAGGCTCAAAGGTAACCTGAAGAATGCTATAGCTCGGAAGGAAAGGGAAATTCAACAAATGACGGATGATGATTTTGAAGAAAAGATGGAAGATATATTACAAGCTGAAACTGAACTTGAAATACTGCTGGGGGAAGAAGAAGATTATTGGAGGTGTCGGTCTAAAGAAACGTGGCTCCAAAGCGGGGATAGAAATACCAAATGGTTCCATTCTAAAGCCTCTCTGAGGAAATCGAGAAATCATATTGATGGAATCTTATCCAAGGAAGGAATTTGGGAAGAGGATGAGGATATGATTGGTTCGATTGCAACTGAGTATTTCAAGGACCTCTTTCAGTCTTCGAGGCCTGTCAATAGATCGATTGTAGAGTTTTTAGAGGGGATCTCGCGGAAGATTACGGACCAGCAAAGAATTGATTTAGACAAGTCGTACACTAGAGAAGAGATCGAGGCCACTATTAAAAGTTTGAATCTTAGCAAAGCTCCGGGATATGATGGGATTCACGCCTCCTTTATCCAATCTTACTAG
Coding sequence (CDS)
ATGGAGTTGTTGGCTGACAATCTCTCGGTGAAGCACCTAAGCTTCATGAGTTCTGATCACAGACCTATTGTGATTAATTGGACTTTTAAGGGGGATAAGGGAGGAAGCCAGAAAAGGAGTTCTCTGTTGAGGTTTGAAGAGGGATGGCTGAAGTTCAAAGAGACTGAAGAGGTGGTTATGAAGAGTTGGGAGGAGCATGGGAGGTTTGATGCCAATCAGTTGTGCCATAGCCTAAGGAGATGCATCCAAAATTTACATCAATGGAGTAAAAACAGGCTCAAAGGTAACCTGAAGAATGCTATAGCTCGGAAGGAAAGGGAAATTCAACAAATGACGGATGATGATTTTGAAGAAAAGATGGAAGATATATTACAAGCTGAAACTGAACTTGAAATACTGCTGGGGGAAGAAGAAGATTATTGGAGGTGTCGGTCTAAAGAAACGTGGCTCCAAAGCGGGGATAGAAATACCAAATGGTTCCATTCTAAAGCCTCTCTGAGGAAATCGAGAAATCATATTGATGGAATCTTATCCAAGGAAGGAATTTGGGAAGAGGATGAGGATATGATTGGTTCGATTGCAACTGAGTATTTCAAGGACCTCTTTCAGTCTTCGAGGCCTGTCAATAGATCGATTGTAGAGTTTTTAGAGGGGATCTCGCGGAAGATTACGGACCAGCAAAGAATTGATTTAGACAAGTCGTACACTAGAGAAGAGATCGAGGCCACTATTAAAAGTTTGAATCTTAGCAAAGCTCCGGGATATGATGGGATTCACGCCTCCTTTATCCAATCTTACTAG
Protein sequence
MELLADNLSVKHLSFMSSDHRPIVINWTFKGDKGGSQKRSSLLRFEEGWLKFKETEEVVMKSWEEHGRFDANQLCHSLRRCIQNLHQWSKNRLKGNLKNAIARKEREIQQMTDDDFEEKMEDILQAETELEILLGEEEDYWRCRSKETWLQSGDRNTKWFHSKASLRKSRNHIDGILSKEGIWEEDEDMIGSIATEYFKDLFQSSRPVNRSIVEFLEGISRKITDQQRIDLDKSYTREEIEATIKSLNLSKAPGYDGIHASFIQSY
Homology
BLAST of Lcy03g004700 vs. ExPASy TrEMBL
Match:
A0A803PWX1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35
Identity = 92/264 (34.85%), Postives = 144/264 (54.55%), Query Frame = 0
Query: 6 DNLSVKHLSFMSSDHRPIVINWTFK--GDKGGSQKRSSLLRFEEGWLKFKETEEVVMKSW 65
+ V+ L + SDHR +VIN + GDK G KR + FEE W + +E E++ W
Sbjct: 745 EGADVQLLDWWESDHRALVINIPVRVDGDKCGKAKRKNRFHFEEAWCQEEECTEIIDNMW 804
Query: 66 EE-HGRFDANQLCHSLRRCIQNLHQWSKNRLKGNLKNAIARKEREIQQMTDDDFEEKMED 125
+E GR + +C + L W+K + K L N IA+ ++ + ++T E
Sbjct: 805 KERQGRGRPVSFRCKINKCGKALQDWNKKK-KARLNNEIAKTKKILHELTMQQQPGVWEA 864
Query: 126 ILQAETELEILLGEEEDYWRCRSKETWLQSGDRNTKWFHSKASLRKSRNHIDGILSKEGI 185
I E +L LL ++E YWR RS+ WLQ GDRNTK+FH KAS R+ +N I G+ + G+
Sbjct: 865 IQHMEDKLNGLLEKDEQYWRQRSRALWLQWGDRNTKYFHHKASSRRKKNEIKGLQDQMGV 924
Query: 186 WEEDEDMIGSIATEYFKDLFQSSRPVNRSIVEFLEGISRKITDQQRIDLDKSYTREEIEA 245
W++D+ ++ I +Y+K LF S + E LE + K++ +L ++ EE+
Sbjct: 925 WQDDKLLVCQIVEDYYKGLFMGSDIDQGVMQEVLEVVQPKVSMSMNEELMVDFSVEEVVQ 984
Query: 246 TIKSLNLSKAPGYDGIHASFIQSY 267
+K +N +KAPG DG+ A F Q +
Sbjct: 985 AVKGMNPTKAPGADGLPALFYQKF 1007
BLAST of Lcy03g004700 vs. ExPASy TrEMBL
Match:
A0A803NG99 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 159.1 bits (401), Expect = 2.6e-35
Identity = 99/265 (37.36%), Postives = 143/265 (53.96%), Query Frame = 0
Query: 9 SVKHLSFMSSDHRPIVINWTFKG--DKGGS-QKRSSLLRFEEGWLKFKETEEVVMKSWEE 68
+V HL + SDHR ++I F D+ S QKR S RFEE WLK E ++++ SW+
Sbjct: 122 TVTHLDYYGSDHRALLIEVVFSSQHDQPSSLQKRRSRFRFEEIWLKEAECSDIILSSWQL 181
Query: 69 HGRFD-ANQLCHSLRRCIQNLHQWSKNRLKGNLKNAIARKEREIQQM-----TDDDFEEK 128
D A L L C +NL QW + G +KN I + ++ + + T DF ++
Sbjct: 182 DSACDPAEMLVQCLNSCAENLQQWHTRKF-GRMKNDIKQAQKHVTMLNNSAATGTDFTQQ 241
Query: 129 MEDILQAETELEILLGEEEDYWRCRSKETWLQSGDRNTKWFHSKASLRKSRNHIDGILSK 188
IL AET L+ LL EE YW+ RS+ WL+SGDRNTK+FH+KAS RKS N I +L
Sbjct: 242 ---ILSAETILDDLLSTEEQYWKQRSRIDWLKSGDRNTKFFHAKASARKSNNQIKFLLDH 301
Query: 189 EGIWEEDEDMIGSIATEYFKDLFQSSRPVNRSIVEFLEGISRKITDQQRIDLDKSYTREE 248
+G + I I + YF+DLF + ++ L I IT L K +T++E
Sbjct: 302 QGNKVSSKQGITDIVSSYFQDLFTAGEEDYWALSHVLSTIPTTITAVHNETLLKEFTKDE 361
Query: 249 IEATIKSLNLSKAPGYDGIHASFIQ 265
+ +K++ ++PG DG+ A F Q
Sbjct: 362 VFQALKNMGSDRSPGLDGMSAMFYQ 382
BLAST of Lcy03g004700 vs. ExPASy TrEMBL
Match:
A0A803Q0R6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 157.1 bits (396), Expect = 9.9e-35
Identity = 97/257 (37.74%), Postives = 137/257 (53.31%), Query Frame = 0
Query: 12 HLSFMSSDHRPIVINWTFKGDKGGSQKRSSLLRFEEGWLKFKETEEVVMKSWEEHGRFD- 71
HL + SDHR ++ N F + R + RFE+ WLK KE E++ SW + D
Sbjct: 60 HLDYYGSDHRVLLANIDFNPTQPVQAPRKT--RFEQFWLKDKECAEIISSSWCHNSDTDS 119
Query: 72 ANQLCHSLRRCIQNLHQWSKNRLKGNLKNAIARKEREIQQM-----TDDDFEEKMEDILQ 131
A QL SL C NL QW + G +K I ++ + + +D DF K I
Sbjct: 120 ATQLVSSLSDCANNLQQWHSRKF-GKMKQDIKHAQQVVHGLNTAVNSDPDFHSK---IHS 179
Query: 132 AETELEILLGEEEDYWRCRSKETWLQSGDRNTKWFHSKASLRKSRNHIDGILSKEGIWEE 191
AET L+ LL EE YW+ RS+ WLQSGDRNTK+FHSKAS R S N I ++ G
Sbjct: 180 AETILDELLVNEEQYWQQRSRVDWLQSGDRNTKFFHSKASARHSNNRIKALMDDHGHTVT 239
Query: 192 DEDMIGSIATEYFKDLFQSSRPVNRSIVEFLEGISRKITDQQRIDLDKSYTREEIEATIK 251
+D I + T+YF+ LF +S + ++ L I I+D+Q L K +T ++ A +K
Sbjct: 240 TKDGISQLVTDYFQQLFTASNEDHWALTHVLSTIPTTISDEQNEFLSKEFTVSDVTAALK 299
Query: 252 SLNLSKAPGYDGIHASF 263
++ K+PG DG+ A F
Sbjct: 300 TIGSDKSPGLDGMSAMF 310
BLAST of Lcy03g004700 vs. ExPASy TrEMBL
Match:
A0A2N9GPZ7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29430 PE=4 SV=1)
HSP 1 Score: 156.8 bits (395), Expect = 1.3e-34
Identity = 85/264 (32.20%), Postives = 150/264 (56.82%), Query Frame = 0
Query: 6 DNLSVKHLSFMSSDHRPIVINWTFKGDKGGSQKRSSLLRFEEGWLKFKETEEVVMKSWEE 65
D V HL+ +SDH PI+++ D +++ L RFE W+K ++ EV+ +W +
Sbjct: 76 DGSVVSHLAVQNSDHCPILLDIP---DGPLVKRKKKLFRFEAMWIKDEQCREVIDHAWGD 135
Query: 66 HGRFDAN---QLCHSLRRCIQNLHQWSKNRLKGNLKNAIARKEREIQQMTDDDFEEKMED 125
G + + + ++ C +L WS+ R G+L ++I RK ++Q + ++
Sbjct: 136 -GVTEGSPMFMVVEKMKLCRTSLIGWSRERF-GSLASSIKRKREQLQHLINETPSGFSTG 195
Query: 126 ILQAETELEILLGEEEDYWRCRSKETWLQSGDRNTKWFHSKASLRKSRNHIDGILSKEGI 185
IL+ + +L LL +EE +WR RS+ W+ GD+NTK+FH++ + R+ NHI G+ ++G+
Sbjct: 196 ILELQDDLNGLLEKEEIFWRQRSRVAWMSEGDKNTKFFHAQCNERRRTNHISGLRDRDGV 255
Query: 186 WEEDEDMIGSIATEYFKDLFQSSRPVNRSIVEFLEGISRKITDQQRIDLDKSYTREEIEA 245
W+ ++ I IA +YF+ +F SS P SI L+G+ +T+ L +T++E+
Sbjct: 256 WQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQLQAEFTKDEVSL 315
Query: 246 TIKSLNLSKAPGYDGIHASFIQSY 267
+K + +KAPG DG+ A F Q+Y
Sbjct: 316 ALKQMYPTKAPGPDGMSAIFYQTY 334
BLAST of Lcy03g004700 vs. ExPASy TrEMBL
Match:
A0A2N9IPS8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55418 PE=4 SV=1)
HSP 1 Score: 156.8 bits (395), Expect = 1.3e-34
Identity = 85/264 (32.20%), Postives = 150/264 (56.82%), Query Frame = 0
Query: 6 DNLSVKHLSFMSSDHRPIVINWTFKGDKGGSQKRSSLLRFEEGWLKFKETEEVVMKSWEE 65
D V HL+ +SDH PI+++ D +++ L RFE W+K ++ EV+ +W +
Sbjct: 651 DGSVVSHLAVQNSDHCPILLDIP---DGPLVKRKKKLFRFEAMWIKDEQCREVIDHAWGD 710
Query: 66 HGRFDAN---QLCHSLRRCIQNLHQWSKNRLKGNLKNAIARKEREIQQMTDDDFEEKMED 125
G + + + ++ C +L WS+ R G+L ++I RK ++Q + ++
Sbjct: 711 -GVTEGSPMFMVVEKMKLCRTSLIGWSRERF-GSLASSIKRKREQLQHLINETPSGFSTG 770
Query: 126 ILQAETELEILLGEEEDYWRCRSKETWLQSGDRNTKWFHSKASLRKSRNHIDGILSKEGI 185
IL+ + +L LL +EE +WR RS+ W+ GD+NTK+FH++ + R+ NHI G+ ++G+
Sbjct: 771 ILELQDDLNGLLEKEEIFWRQRSRVAWMSEGDKNTKFFHAQCNERRRTNHISGLRDRDGV 830
Query: 186 WEEDEDMIGSIATEYFKDLFQSSRPVNRSIVEFLEGISRKITDQQRIDLDKSYTREEIEA 245
W+ ++ I IA +YF+ +F SS P SI L+G+ +T+ L +T++E+
Sbjct: 831 WQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQLQAEFTKDEVSL 890
Query: 246 TIKSLNLSKAPGYDGIHASFIQSY 267
+K + +KAPG DG+ A F Q+Y
Sbjct: 891 ALKQMYPTKAPGPDGMSAIFYQTY 909
BLAST of Lcy03g004700 vs. NCBI nr
Match:
XP_030502555.1 (uncharacterized protein LOC115717715 [Cannabis sativa])
HSP 1 Score: 163.7 bits (413), Expect = 2.2e-36
Identity = 97/257 (37.74%), Postives = 139/257 (54.09%), Query Frame = 0
Query: 12 HLSFMSSDHRPIVINWTFKGDKGGSQKRSSLLRFEEGWLKFKETEEVVMKSWEEHGRFD- 71
HL + SDHR ++ N F + R + RFE+ WLK KE E++ SW + D
Sbjct: 217 HLDYYGSDHRVLLANIDFNPTQPVQAPRKTRFRFEQLWLKDKECAEIISSSWCHNSDSDS 276
Query: 72 ANQLCHSLRRCIQNLHQWSKNRLKGNLKNAIARKEREIQQM-----TDDDFEEKMEDILQ 131
A QL SL C NL QW + G +K I ++ + + +D DF+ K I
Sbjct: 277 ATQLVSSLSDCANNLQQWHSRKF-GKMKQDIKHAQQAVHGLNTAVNSDPDFQSK---IHS 336
Query: 132 AETELEILLGEEEDYWRCRSKETWLQSGDRNTKWFHSKASLRKSRNHIDGILSKEGIWEE 191
AET L+ LL EE YW+ RS+ WLQSGDRNTK+FHSKAS R S N I ++ G
Sbjct: 337 AETILDDLLANEEQYWQQRSRVDWLQSGDRNTKFFHSKASARHSNNRIKVLMDDHGHTVT 396
Query: 192 DEDMIGSIATEYFKDLFQSSRPVNRSIVEFLEGISRKITDQQRIDLDKSYTREEIEATIK 251
++ I + T+YF+ LF +S + ++ L I I+D+Q L K +T ++ AT+K
Sbjct: 397 TKEGISQLVTDYFQQLFTASNEDHWALTHVLSTIPTTISDEQNEFLSKEFTASDVTATLK 456
Query: 252 SLNLSKAPGYDGIHASF 263
++ K+PG DG+ A F
Sbjct: 457 TIGSDKSPGLDGMSAMF 469
BLAST of Lcy03g004700 vs. NCBI nr
Match:
XP_030497600.1 (uncharacterized protein LOC115713257 [Cannabis sativa])
HSP 1 Score: 151.4 bits (381), Expect = 1.1e-32
Identity = 91/259 (35.14%), Postives = 135/259 (52.12%), Query Frame = 0
Query: 10 VKHLSFMSSDHRPIVINWTFKGDKGGSQKRSSLLRFEEGWLKFKETEEVVMKSWEEHGRF 69
+ HL + SDHR ++ F R + RFE+ WLK KE E++ SW
Sbjct: 215 LSHLDYYGSDHRVLLAEIDFNLTPPAQAPRKTRFRFEQFWLKDKECYEIISNSWLHSSET 274
Query: 70 D-ANQLCHSLRRCIQNLHQWSKNRLKGNLKNAIARKEREIQQM-----TDDDFEEKMEDI 129
D A++L SLR C NLH W + G +K I ++ + + +D DF K+
Sbjct: 275 DPASRLVSSLRVCANNLHDWHYRKF-GKMKQDIKLAQKTVHGLNTSASSDPDFSAKVH-- 334
Query: 130 LQAETELEILLGEEEDYWRCRSKETWLQSGDRNTKWFHSKASLRKSRNHIDGILSKEGIW 189
AE+ L+ LL EE YW+ RS+ WLQSGDRNTK+FHSKAS R S N I + G
Sbjct: 335 -SAESILDELLANEEQYWQQRSRVDWLQSGDRNTKFFHSKASARHSNNRIKALTDDHGNT 394
Query: 190 EEDEDMIGSIATEYFKDLFQSSRPVNRSIVEFLEGISRKITDQQRIDLDKSYTREEIEAT 249
++ I + +YF++LF +S + ++ L I I+D+Q L + +T E+
Sbjct: 395 VTTKEGISRVVADYFQELFTASNEDHWALSHVLSTIPTTISDEQNDFLCQDFTASEVFTA 454
Query: 250 IKSLNLSKAPGYDGIHASF 263
+K++ K+PG DG+ A F
Sbjct: 455 LKTIGSDKSPGLDGMSAMF 469
BLAST of Lcy03g004700 vs. NCBI nr
Match:
POO04030.1 (Endonuclease/exonuclease/phosphatase [Trema orientale])
HSP 1 Score: 149.4 bits (376), Expect = 4.3e-32
Identity = 88/263 (33.46%), Postives = 150/263 (57.03%), Query Frame = 0
Query: 7 NLSVKHLSFMSSDHRPIVINWTFKGDKGGS--QKRSSLLRFEEGWLKFKETEEVVMKSWE 66
++ ++HL F +SDHR ++++ D S ++R S RF+ WL+ KE+ E++ +W+
Sbjct: 213 SIELEHLDFYNSDHRALLVSIYDNMDAQVSYVKRRCSRFRFKALWLEEKESYEIIKNAWK 272
Query: 67 EHGRFDA-NQLCHSLRRCIQNLHQWSKNRLKGNLKNAIARKEREIQQMT--DDDFEEKME 126
+ G A + ++ C ++L +WS+N+ G LK + + ++ +Q++ DD E
Sbjct: 273 DIGSESAMTMVLKNISACSESLTKWSQNKF-GCLKTEVYKAQKRVQKLNKEDDTSTEHYS 332
Query: 127 DILQAETELEILLGEEEDYWRCRSKETWLQSGDRNTKWFHSKASLRKSRNHIDGILSKEG 186
+LQ ET L+ LL EE YW+ RS+ +W+QSGD NTK+FHSKA+ R+ N I I K G
Sbjct: 333 ILLQQETILDELLHREEIYWKQRSRVSWIQSGDANTKFFHSKANKRRKANKIKKIQDKYG 392
Query: 187 IWEEDEDMIGSIATEYFKDLFQSSRPVNRSIVEFLEGISRKITDQQRIDLDKSYTREEIE 246
I ++ I ++ +YF+++F S N ++ + L I ITD L + + ++
Sbjct: 393 ILVNKDEDIENVIVDYFQNIFTSVGENNEALEQVLHTIDPSITDVMNSKLIRPFIANDVW 452
Query: 247 ATIKSLNLSKAPGYDGIHASFIQ 265
I+S+ ++PG DGI A F Q
Sbjct: 453 DAIQSMGPDRSPGQDGISAMFYQ 474
BLAST of Lcy03g004700 vs. NCBI nr
Match:
XP_023906330.1 (uncharacterized protein LOC112018052 [Quercus suber])
HSP 1 Score: 146.4 bits (368), Expect = 3.6e-31
Identity = 80/232 (34.48%), Postives = 130/232 (56.03%), Query Frame = 0
Query: 37 QKRSSLLRFEEGWLKFKETEEVVMKSWEEHGRFDANQLC--HSLRRCIQNLHQWSKNRLK 96
+K+++ RFEE W+ +E ++ ++W + + C ++ L +W K
Sbjct: 344 RKKNTPRRFEEKWVSNQECGRIIEEAWRQTVEVGSPMFCLFQKIKNTRLALLKWEKVAF- 403
Query: 97 GNLKNAIARKEREIQQMTDDDFEEKMEDILQAETELEILLGEEEDYWRCRSKETWLQSGD 156
GN K ++ K RE++++ + +E I + + E+ +L +EE WR RS+ WL +GD
Sbjct: 404 GNTKASLKDKHRELEELNSKNDPALLERIRETKVEINNILHQEEVAWRQRSRAIWLPAGD 463
Query: 157 RNTKWFHSKASLRKSRNHIDGILSKEGIWEEDEDMIGSIATEYFKDLFQSSRPVNRSIVE 216
+NTK+FH +A+ RK RN I G+ + G W DED I IA EYF+ LF SS+P + +
Sbjct: 464 KNTKFFHQRATQRKRRNQIVGVFNTVGEWCTDEDQIADIAVEYFQSLFTSSQPEDDDVSR 523
Query: 217 FLEGISRKITDQQRIDLDKSYTREEIEATIKSLNLSKAPGYDGIHASFIQSY 267
LE + R++TD+ L + YT EEI + ++ SKAPG DG+ F Q +
Sbjct: 524 VLEAVDRRVTDEMNGTLLEPYTGEEIRQALFQMHPSKAPGPDGMSPFFFQKF 574
BLAST of Lcy03g004700 vs. NCBI nr
Match:
XP_030936391.1 (uncharacterized protein LOC115961572 [Quercus lobata])
HSP 1 Score: 144.8 bits (364), Expect = 1.0e-30
Identity = 89/261 (34.10%), Postives = 133/261 (50.96%), Query Frame = 0
Query: 12 HLSFMSSDHRPIVINWTFKGDKGGSQKRSSLLRFEEGWLKFKETEEVVMKSWEEHGRFDA 71
HLS +SDH P+ ++ K K +K RFE WLK EE+V +WE A
Sbjct: 217 HLSSSASDHSPLSLHLVPKRKK---KKIRKSFRFESMWLKDSRCEEIVKAAWEIGEHSGA 276
Query: 72 NQLCHS-LRRCIQNLHQWSKNRLKGNLKNAIARKEREIQQMTD-----DDFEEKMEDILQ 131
+ S L C +L +W+K + RK E+QQ + + ++
Sbjct: 277 EGILKSCLEHCRHDLEKWNKEEF-----GHVGRKISELQQKLEWLELQPSSSGILGELRT 336
Query: 132 AETELEILLGEEEDYWRCRSKETWLQSGDRNTKWFHSKASLRKSRNHIDGILSKEGIWEE 191
L L +E++ WR RS+ W Q GDRNT +FH+KAS R +N+IDGI+ ++G W+E
Sbjct: 337 TRVNLNKWLEKEDEMWRQRSRLNWFQGGDRNTSFFHAKASARHQKNYIDGIVDEQGRWQE 396
Query: 192 DEDMIGSIATEYFKDLFQSSRPVNRSIVEFLEGISRKITDQQRIDLDKSYTREEIEATIK 251
DE I +A YF+ LF SS+P S + L + K+T ++L + YT +E+ +K
Sbjct: 397 DELKIEEVAVAYFEKLFTSSKPEEFS--DILHAVQPKVTTDMNVELTREYTAQEVRLALK 456
Query: 252 SLNLSKAPGYDGIHASFIQSY 267
+ KAPG DG+ F Q +
Sbjct: 457 QMYPLKAPGPDGMPPLFFQHF 467
BLAST of Lcy03g004700 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 43.1 bits (100), Expect = 4.0e-04
Identity = 43/208 (20.67%), Postives = 85/208 (40.87%), Query Frame = 0
Query: 62 SWEEH-----GRFDANQLCHSLRRCIQNLHQWSKNRLKGNLKNAIARKEREIQQMTDDDF 121
+WEE F + + ++C + L++ ++ K A+ E Q+ +
Sbjct: 351 AWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPS 410
Query: 122 EEKMEDILQAETELEILLGEEEDYWRCRSKETWLQSGDRNTKWFHSKASLRKSRNHIDGI 181
+ A + E ++R +S+ WLQ GD NT++FH +++N I +
Sbjct: 411 DSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFL 470
Query: 182 LSKEGIWEEDEDMIGSIATEYFKDLFQSSRPV-NRSIVEFLEGISR-KITDQQRIDLDKS 241
+ + E+ + + Y+ L S + V+ ++ I + D L
Sbjct: 471 RMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSAL 530
Query: 242 YTREEIEATIKSLNLSKAPGYDGIHASF 263
+ +EI A + ++ +KAPG D A F
Sbjct: 531 PSDKEITAAVFAMPRNKAPGPDSFTAEF 558
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A803PWX1 | 2.0e-35 | 34.85 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803NG99 | 2.6e-35 | 37.36 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803Q0R6 | 9.9e-35 | 37.74 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A2N9GPZ7 | 1.3e-34 | 32.20 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2N9IPS8 | 1.3e-34 | 32.20 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
Match Name | E-value | Identity | Description | |
AT1G43760.1 | 4.0e-04 | 20.67 | DNAse I-like superfamily protein | [more] |