Lcy03g000340 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g000340
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr03: 1136811 .. 1137648 (-)
RNA-Seq ExpressionLcy03g000340
SyntenyLcy03g000340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAGATGCAAATAAATCAGTGAGAAGCAAGAAATCTGGAAAAAATGAATTAATTGAAATGCAGAGGTGAGTGAATGTTGCACTAGTGCTTGTAAATGTTAGGTGAAATCGCCATAAATCCAACACCCAAGTTCCTGATGGATCAATTAATCCCTTCAAACCTACCCCAAAATTTAAAATCACGAAACCAACAGTAATTTTGATAAACTTCTGCTCCTATAAATCCCTGTGTGGTACATGGGTTTCCCGAGATCCACAGAGAGAGAGAGAGCTTGTTGAACGAAATGGGGAGAAAGGGAATGGTGGGTTTTGGTGCTGTGGCTGTGGCGATGGTGGCCCTGATGTTGGTTGGTGAAGGGGCAAGGACAAGGATGATGAAAGATGAGCAGGAGAGTTATCGGCCTCAAAACTTCATAGCGGCAGGTGGCTTCATACCCACAACGCCAGGGACGCCGGGCTTTGCCACGGGCTTTGGATTTGGGCCTTCTGGCTTCTGTACGTTTCCGGGGAGCTGTGCTAACAACGTTCCTGCTGCGGTGCTTCCTACTCTTCCTGGCGGTGGCGGTGGCGGTGGCGGCGGCGGCGGCGGCGGCTCCTCTTCCTCCCCCGGTGCCGGTAGTGCTGGTGGTGGAGTGGGATCGCATTCACGACCTTGATGTTGGCTATGGATGATTGTTGAATGTAATGTGGCTAATGTATTAGGTAGGGTTGTTTAGTTATGCTTGGTCATATTAAGTATTAACTATATTAAGTTGACGTTTTCAGTTTCTGTTGCTGGTGTGACGATGTACCTTTTATAACTTTATGTTAATAAAATTAATCTTTGTTTACCTTTTGA

mRNA sequence

ATTAGATGCAAATAAATCAGTGAGAAGCAAGAAATCTGGAAAAAATGAATTAATTGAAATGCAGAGGTGAGTGAATGTTGCACTAGTGCTTGTAAATGTTAGGTGAAATCGCCATAAATCCAACACCCAAGTTCCTGATGGATCAATTAATCCCTTCAAACCTACCCCAAAATTTAAAATCACGAAACCAACAGTAATTTTGATAAACTTCTGCTCCTATAAATCCCTGTGTGGTACATGGGTTTCCCGAGATCCACAGAGAGAGAGAGAGCTTGTTGAACGAAATGGGGAGAAAGGGAATGGTGGGTTTTGGTGCTGTGGCTGTGGCGATGGTGGCCCTGATGTTGGTTGGTGAAGGGGCAAGGACAAGGATGATGAAAGATGAGCAGGAGAGTTATCGGCCTCAAAACTTCATAGCGGCAGGTGGCTTCATACCCACAACGCCAGGGACGCCGGGCTTTGCCACGGGCTTTGGATTTGGGCCTTCTGGCTTCTGTACGTTTCCGGGGAGCTGTGCTAACAACGTTCCTGCTGCGGTGCTTCCTACTCTTCCTGGCGGTGGCGGTGGCGGTGGCGGCGGCGGCGGCGGCGGCTCCTCTTCCTCCCCCGGTGCCGGTAGTGCTGGTGGTGGAGTGGGATCGCATTCACGACCTTGATGTTGGCTATGGATGATTGTTGAATGTAATGTGGCTAATGTATTAGGTAGGGTTGTTTAGTTATGCTTGGTCATATTAAGTATTAACTATATTAAGTTGACGTTTTCAGTTTCTGTTGCTGGTGTGACGATGTACCTTTTATAACTTTATGTTAATAAAATTAATCTTTGTTTACCTTTTGA

Coding sequence (CDS)

ATGGGGAGAAAGGGAATGGTGGGTTTTGGTGCTGTGGCTGTGGCGATGGTGGCCCTGATGTTGGTTGGTGAAGGGGCAAGGACAAGGATGATGAAAGATGAGCAGGAGAGTTATCGGCCTCAAAACTTCATAGCGGCAGGTGGCTTCATACCCACAACGCCAGGGACGCCGGGCTTTGCCACGGGCTTTGGATTTGGGCCTTCTGGCTTCTGTACGTTTCCGGGGAGCTGTGCTAACAACGTTCCTGCTGCGGTGCTTCCTACTCTTCCTGGCGGTGGCGGTGGCGGTGGCGGCGGCGGCGGCGGCGGCTCCTCTTCCTCCCCCGGTGCCGGTAGTGCTGGTGGTGGAGTGGGATCGCATTCACGACCTTGA

Protein sequence

MGRKGMVGFGAVAVAMVALMLVGEGARTRMMKDEQESYRPQNFIAAGGFIPTTPGTPGFATGFGFGPSGFCTFPGSCANNVPAAVLPTLPGGGGGGGGGGGGGSSSSPGAGSAGGGVGSHSRP
Homology
BLAST of Lcy03g000340 vs. ExPASy TrEMBL
Match: V7BJ36 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G204200g PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07
Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 0

Query: 12 VAVAMVALMLVGEGARTRMMKDEQESY-RPQNFIAAGGFIPTTPG-TPGFA-TGFGFGPS 71
          V +AMV L+        R++K+E+E   +PQNF  +GG     P  +PGF+ TG GFGP+
Sbjct: 9  VMLAMVVLVCASNVEGGRLLKEEEEDVEQPQNFPGSGGLGGIFPSPSPGFSFTGVGFGPN 68

Query: 72 GFCTFPGSCANNVPAAVLPTLPGGGGG 96
          GFCTFPG C         PTLPGGGGG
Sbjct: 69 GFCTFPGGC-----TPTFPTLPGGGGG 90

BLAST of Lcy03g000340 vs. ExPASy TrEMBL
Match: A0A4D6N0D3 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g2250 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.1e-07
Identity = 41/88 (46.59%), Postives = 53/88 (60.23%), Query Frame = 0

Query: 12 VAVAMVALMLVGEGARTRMMKDEQESYRPQNFI---AAGGFIPTTPGTPGFA-TGFGFGP 71
          V +A+V L+        R++K+E+   +PQNF    A GG  P+   +PGF+ TG GFGP
Sbjct: 9  VMLAVVVLVSASNVEGGRLLKEEENVEQPQNFPGSGALGGIFPSP--SPGFSFTGVGFGP 68

Query: 72 SGFCTFPGSCANNVPAAVLPTLPGGGGG 96
          +GFCTFPG C        LPT PGGGGG
Sbjct: 69 NGFCTFPGGC-----TPTLPTFPGGGGG 89

BLAST of Lcy03g000340 vs. ExPASy TrEMBL
Match: A0A151U4K1 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_006923 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 4.0e-07
Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = 0

Query: 12 VAVAMVALMLVGEGARTRMMKDEQESYRPQNFIAAGGFIPTTPG-TPGFA-TGFGFGPSG 71
          V + MV +++       R++K+E    +PQNF+ +GG     P  +PGF+ TG GFGPSG
Sbjct: 9  VMLVMVVMVVASNVEGGRLLKEENVD-KPQNFLGSGGLGGIFPSPSPGFSFTGIGFGPSG 68

Query: 72 FCTFPGSCANNVPAAVLPTLPGGGG 95
          FCTFPG C  N     LPT+PG GG
Sbjct: 69 FCTFPGGCTPN-----LPTIPGAGG 87

BLAST of Lcy03g000340 vs. ExPASy TrEMBL
Match: A0A371IAQ1 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_03122 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 6.9e-07
Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 0

Query: 12 VAVAMVALMLVGEGARTRMMKDEQESYRPQNFIAAGGFIPTTPG-TPGFA-TGFGFGPSG 71
          V +AMV ++   +    R++K+E     PQNFI +GG     P  +PGF+ TG GFGPSG
Sbjct: 9  VMLAMVLVVFAWDVEGRRLLKEENVD-EPQNFIGSGGLGGIFPSPSPGFSFTGVGFGPSG 68

Query: 72 FCTFPGSCANNVPAAVLPTLPGGGG 95
          FCTFPG C      + LPT+PG GG
Sbjct: 69 FCTFPGGCT----PSTLPTIPGAGG 88

BLAST of Lcy03g000340 vs. ExPASy TrEMBL
Match: A0A2P6R7W2 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0458221 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-06
Identity = 40/89 (44.94%), Postives = 50/89 (56.18%), Query Frame = 0

Query: 14  VAMVALMLVGEGARTRMMKDEQESYRPQNFI--AAGGFIPTTPGTPGFATGFGFGPSGFC 73
           +  V  +++  G   R+MK +++   PQNF   A G F P +   PGFATG GF PSGFC
Sbjct: 11  ILTVVAVILALGVEARVMKTKEQVEHPQNFYGGAGGAFFPGS--GPGFATGIGFSPSGFC 70

Query: 74  TFPGSCANNVPAAVLPTLPGGGGGGGGGG 101
           T PG C         PT+PGG  G GGGG
Sbjct: 71  TLPGGCVPTTGG--FPTIPGGSIGTGGGG 95

BLAST of Lcy03g000340 vs. NCBI nr
Match: XP_007145034.1 (hypothetical protein PHAVU_007G204200g [Phaseolus vulgaris] >ESW17028.1 hypothetical protein PHAVU_007G204200g [Phaseolus vulgaris])

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-07
Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 0

Query: 12 VAVAMVALMLVGEGARTRMMKDEQESY-RPQNFIAAGGFIPTTPG-TPGFA-TGFGFGPS 71
          V +AMV L+        R++K+E+E   +PQNF  +GG     P  +PGF+ TG GFGP+
Sbjct: 9  VMLAMVVLVCASNVEGGRLLKEEEEDVEQPQNFPGSGGLGGIFPSPSPGFSFTGVGFGPN 68

Query: 72 GFCTFPGSCANNVPAAVLPTLPGGGGG 96
          GFCTFPG C         PTLPGGGGG
Sbjct: 69 GFCTFPGGC-----TPTFPTLPGGGGG 90

BLAST of Lcy03g000340 vs. NCBI nr
Match: QCE07233.1 (hypothetical protein DEO72_LG9g2250 [Vigna unguiculata])

HSP 1 Score: 64.7 bits (156), Expect = 6.4e-07
Identity = 41/88 (46.59%), Postives = 53/88 (60.23%), Query Frame = 0

Query: 12 VAVAMVALMLVGEGARTRMMKDEQESYRPQNFI---AAGGFIPTTPGTPGFA-TGFGFGP 71
          V +A+V L+        R++K+E+   +PQNF    A GG  P+   +PGF+ TG GFGP
Sbjct: 9  VMLAVVVLVSASNVEGGRLLKEEENVEQPQNFPGSGALGGIFPSP--SPGFSFTGVGFGP 68

Query: 72 SGFCTFPGSCANNVPAAVLPTLPGGGGG 96
          +GFCTFPG C        LPT PGGGGG
Sbjct: 69 NGFCTFPGGC-----TPTLPTFPGGGGG 89

BLAST of Lcy03g000340 vs. NCBI nr
Match: KYP74252.1 (hypothetical protein KK1_006923 [Cajanus cajan])

HSP 1 Score: 64.3 bits (155), Expect = 8.3e-07
Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = 0

Query: 12 VAVAMVALMLVGEGARTRMMKDEQESYRPQNFIAAGGFIPTTPG-TPGFA-TGFGFGPSG 71
          V + MV +++       R++K+E    +PQNF+ +GG     P  +PGF+ TG GFGPSG
Sbjct: 9  VMLVMVVMVVASNVEGGRLLKEENVD-KPQNFLGSGGLGGIFPSPSPGFSFTGIGFGPSG 68

Query: 72 FCTFPGSCANNVPAAVLPTLPGGGG 95
          FCTFPG C  N     LPT+PG GG
Sbjct: 69 FCTFPGGCTPN-----LPTIPGAGG 87

BLAST of Lcy03g000340 vs. NCBI nr
Match: RDY12123.1 (hypothetical protein CR513_03122, partial [Mucuna pruriens])

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-06
Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 0

Query: 12 VAVAMVALMLVGEGARTRMMKDEQESYRPQNFIAAGGFIPTTPG-TPGFA-TGFGFGPSG 71
          V +AMV ++   +    R++K+E     PQNFI +GG     P  +PGF+ TG GFGPSG
Sbjct: 9  VMLAMVLVVFAWDVEGRRLLKEENVD-EPQNFIGSGGLGGIFPSPSPGFSFTGVGFGPSG 68

Query: 72 FCTFPGSCANNVPAAVLPTLPGGGG 95
          FCTFPG C      + LPT+PG GG
Sbjct: 69 FCTFPGGCT----PSTLPTIPGAGG 88

BLAST of Lcy03g000340 vs. NCBI nr
Match: PRQ42492.1 (hypothetical protein RchiOBHm_Chr3g0458221 [Rosa chinensis])

HSP 1 Score: 62.4 bits (150), Expect = 3.2e-06
Identity = 40/89 (44.94%), Postives = 50/89 (56.18%), Query Frame = 0

Query: 14  VAMVALMLVGEGARTRMMKDEQESYRPQNFI--AAGGFIPTTPGTPGFATGFGFGPSGFC 73
           +  V  +++  G   R+MK +++   PQNF   A G F P +   PGFATG GF PSGFC
Sbjct: 11  ILTVVAVILALGVEARVMKTKEQVEHPQNFYGGAGGAFFPGS--GPGFATGIGFSPSGFC 70

Query: 74  TFPGSCANNVPAAVLPTLPGGGGGGGGGG 101
           T PG C         PT+PGG  G GGGG
Sbjct: 71  TLPGGCVPTTGG--FPTIPGGSIGTGGGG 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
V7BJ361.1e-0748.28Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G204200g PE=4 ... [more]
A0A4D6N0D33.1e-0746.59Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g2250 PE=4 SV=1[more]
A0A151U4K14.0e-0745.88Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_006923 PE=4 SV=1[more]
A0A371IAQ16.9e-0747.06Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_03122 P... [more]
A0A2P6R7W21.5e-0644.94Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0458221 PE=4... [more]
Match NameE-valueIdentityDescription
XP_007145034.12.2e-0748.28hypothetical protein PHAVU_007G204200g [Phaseolus vulgaris] >ESW17028.1 hypothet... [more]
QCE07233.16.4e-0746.59hypothetical protein DEO72_LG9g2250 [Vigna unguiculata][more]
KYP74252.18.3e-0745.88hypothetical protein KK1_006923 [Cajanus cajan][more]
RDY12123.11.4e-0647.06hypothetical protein CR513_03122, partial [Mucuna pruriens][more]
PRQ42492.13.2e-0644.94hypothetical protein RchiOBHm_Chr3g0458221 [Rosa chinensis][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g000340.1Lcy03g000340.1mRNA