Lcy02g010390 (gene) Sponge gourd (P93075) v1

Overview
NameLcy02g010390
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr02: 28485025 .. 28486487 (+)
RNA-Seq ExpressionLcy02g010390
SyntenyLcy02g010390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAATGTTTTACAGGACATTCAGGAAAAGGTTACTTCAAATATGAATGATCAACTTCTAGCACCGTTTACTCGTGGAAATATTGAAAGAGCAATCAAACAGATGCACCCGTCAAAGGTACCTGACCCAGATGGTTTTCTAGCACTTTTCTATCAGCAGTTCTGGACTGAGATTGGTGATACTACTATTTTGAATTGTCTAGAAATTTTAAACCAATCCCGCTCTGTTGGTGACTAGAACTCTACATATCTTGCGCTCATTCCTAAACTAAATAATCCCAAAAAGATGTCAGATTTTAGACCAATTAGTTTGTGTAATGTGGCCTACAAGATAATTGCAAAAGTGTTAGTCAACAGAATGAAAGGAGTCTTGCAACATATTATCTCAGAAAACCAATCTGCTTTTGTATCGGAGAGGTCGATTTTTGATAATATAATTATGGGGCAAGAATGCCTGCATATAATCAAATCTCGAAGGGAGGGTCGCAAGGGGTGGTTAGCTTTAAAGCTCGACATGAGTAAAGCTTATGATCGGGTCGAATGTAGTTTCCTGAAGCGTTTGATGGTGAAGATGGGCTTCCACACAAAATGGGTGGCTTTAATTATGGATTGTGTCAAGACTGCCAAATTCTCTGTGCTATTAAATGGGGTGCCGACTGGAAACATAGTACCTCAAAGGGGACTACGACAAGGTGATCCTCTTTCACCTTATCTATTTTTGCTATGTTCAGAAGCTTTTTCCTCAATGATAATTGGAGCTATGACTCGAAAGACAATGACTGTTATCAAGGTAAATAAACATTGCCATGAGACTTCTCATCTCTTCTTTGCTGACGATAGCCTAATTTTTTGCCAAGCATCTATTGAGCAGGTTTGGATTTTTTGGTCAATTCTAGAAAGGTATGAGTTGGCGTCGGGACAAATTGTTAATACTAACAAATCTGCTTTATTTTTTTCCACAAATGTAGCCATGGACTTTCGGTCTACTCTCTCTAGTTTACTGGCAATGCCTATGGTTGACAATTTGGAGAAATATTTGGGGTCCCATCTACTTTTTCTAGAAATAGACAAGATGATTTTAAAAGCATCAAACAAAGAGTCTGGCAAACACTTCAGGCGTGGAAGGGGAACTTATTTTCTATTGGTGGTAAGGAGACACTTATCAAAAGTGTGGCCCAAGCCATACCAACTTATATTATGAGTTGCTTTCAGATCCCACAAACTTTGTGTGATGATCTTCAGCAAATGATGGCTCGGTTTTGGTGGGGTTCCACAAATTCCAAAAGGAAGATCCACTGGAAAAAATGGGATACTTTGTGTCGCCCAAAGGAGATAGGAGGTTTAAACTTTAGAAATTTGGTGAATTTTAATAAAGCACTGTTAGCAAAGCAAGTTTGGCGATTGTACAACAATCCCAATTTGTTAGCTTCTAGAGTGATTCAGGCTACATATGCATATTAG

mRNA sequence

ATGGATAATGTTTTACAGGACATTCAGGAAAAGGTTACTTCAAATATGAATGATCAACTTCTAGCACCGTTTACTCGTGGAAATATTGAAAGAGCAATCAAACAGATGCACCCGTCAAAGAACTCTACATATCTTGCGCTCATTCCTAAACTAAATAATCCCAAAAAGATGTCAGATTTTAGACCAATTAGTTTGTGTAATGTGGCCTACAAGATAATTGCAAAAGTGTTAGTCAACAGAATGAAAGGAGTCTTGCAACATATTATCTCAGAAAACCAATCTGCTTTTGTATCGGAGAGGTCGATTTTTGATAATATAATTATGGGGCAAGAATGCCTGCATATAATCAAATCTCGAAGGGAGGGTCGCAAGGGGTGGTTAGCTTTAAAGCTCGACATGAGTAAAGCTTATGATCGGGTCGAATGTAGTTTCCTGAAGCGTTTGATGGTGAAGATGGGCTTCCACACAAAATGGGTGGCTTTAATTATGGATTGTGTCAAGACTGCCAAATTCTCTGTGCTATTAAATGGGGTGCCGACTGGAAACATAGTACCTCAAAGGGGACTACGACAAGGTGATCCTCTTTCACCTTATCTATTTTTGCTATGTTCAGAAGCTTTTTCCTCAATGATAATTGGAGCTATGACTCGAAAGACAATGACTGTTATCAAGGCGTGGAAGGGGAACTTATTTTCTATTGGTGGTAAGGAGACACTTATCAAAAGTGTGGCCCAAGCCATACCAACTTATATTATGAGTTGCTTTCAGATCCCACAAACTTTGTGTGATGATCTTCAGCAAATGATGGCTCGGTTTTGGTGGGGTTCCACAAATTCCAAAAGGAAGATCCACTGGAAAAAATGGGATACTTTGTGTCGCCCAAAGGAGATAGGAGGTTTAAACTTTAGAAATTTGGTGAATTTTAATAAAGCACTGTTAGCAAAGCAAGTTTGGCGATTGTACAACAATCCCAATTTGTTAGCTTCTAGAGTGATTCAGGCTACATATGCATATTAG

Coding sequence (CDS)

ATGGATAATGTTTTACAGGACATTCAGGAAAAGGTTACTTCAAATATGAATGATCAACTTCTAGCACCGTTTACTCGTGGAAATATTGAAAGAGCAATCAAACAGATGCACCCGTCAAAGAACTCTACATATCTTGCGCTCATTCCTAAACTAAATAATCCCAAAAAGATGTCAGATTTTAGACCAATTAGTTTGTGTAATGTGGCCTACAAGATAATTGCAAAAGTGTTAGTCAACAGAATGAAAGGAGTCTTGCAACATATTATCTCAGAAAACCAATCTGCTTTTGTATCGGAGAGGTCGATTTTTGATAATATAATTATGGGGCAAGAATGCCTGCATATAATCAAATCTCGAAGGGAGGGTCGCAAGGGGTGGTTAGCTTTAAAGCTCGACATGAGTAAAGCTTATGATCGGGTCGAATGTAGTTTCCTGAAGCGTTTGATGGTGAAGATGGGCTTCCACACAAAATGGGTGGCTTTAATTATGGATTGTGTCAAGACTGCCAAATTCTCTGTGCTATTAAATGGGGTGCCGACTGGAAACATAGTACCTCAAAGGGGACTACGACAAGGTGATCCTCTTTCACCTTATCTATTTTTGCTATGTTCAGAAGCTTTTTCCTCAATGATAATTGGAGCTATGACTCGAAAGACAATGACTGTTATCAAGGCGTGGAAGGGGAACTTATTTTCTATTGGTGGTAAGGAGACACTTATCAAAAGTGTGGCCCAAGCCATACCAACTTATATTATGAGTTGCTTTCAGATCCCACAAACTTTGTGTGATGATCTTCAGCAAATGATGGCTCGGTTTTGGTGGGGTTCCACAAATTCCAAAAGGAAGATCCACTGGAAAAAATGGGATACTTTGTGTCGCCCAAAGGAGATAGGAGGTTTAAACTTTAGAAATTTGGTGAATTTTAATAAAGCACTGTTAGCAAAGCAAGTTTGGCGATTGTACAACAATCCCAATTTGTTAGCTTCTAGAGTGATTCAGGCTACATATGCATATTAG

Protein sequence

MDNVLQDIQEKVTSNMNDQLLAPFTRGNIERAIKQMHPSKNSTYLALIPKLNNPKKMSDFRPISLCNVAYKIIAKVLVNRMKGVLQHIISENQSAFVSERSIFDNIIMGQECLHIIKSRREGRKGWLALKLDMSKAYDRVECSFLKRLMVKMGFHTKWVALIMDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLFLLCSEAFSSMIIGAMTRKTMTVIKAWKGNLFSIGGKETLIKSVAQAIPTYIMSCFQIPQTLCDDLQQMMARFWWGSTNSKRKIHWKKWDTLCRPKEIGGLNFRNLVNFNKALLAKQVWRLYNNPNLLASRVIQATYAY
Homology
BLAST of Lcy02g010390 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.5e-18
Identity = 59/172 (34.30%), Postives = 95/172 (55.23%), Query Frame = 0

Query: 45  LALIPKLNNPKKMSDFRPISLCNVAYKIIAKVLVNRMKGVLQHIISENQSAFVSERSIFD 104
           L+L+PK  + + + ++RP+SL +  YKI+AK +  R+K VL  +I  +QS  V  R+IFD
Sbjct: 510 LSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFD 569

Query: 105 NIIMGQECLHIIKSRREGRKGWLALKLDMSKAYDRVECSFLKRLMVKMGFHTKWVALIMD 164
           N+ + ++ LH   +RR G      L LD  KA+DRV+  +L   +    F  ++V  +  
Sbjct: 570 NVFLIRDLLHF--ARRTG-LSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKT 629

Query: 165 CVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLFLLCSEAFSSMIIGAMT 217
              +A+  V +N   T  +   RG+RQG PLS  L+ L  E F  ++   +T
Sbjct: 630 MYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPFLCLLRKRLT 678

BLAST of Lcy02g010390 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.9e-18
Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 0

Query: 213 GAMTRKTMTVIKAWKGNLFSIGGKETLIKSVAQAIPTYIMSCFQIPQTLCDDLQQMMARF 272
           G +  +  + +  W+    S  G+ TL K+V  ++P + MS   +PQ++ + L Q+   F
Sbjct: 14  GEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTF 73

Query: 273 WWGSTNSKRKIHWKKWDTLCRPKEIGGLNFRNLVNFNKALLAKQVWRLYNNPNLLASRVI 332
            WGST  K+K H  KW  +C PK+ GGL  R   + N+AL++K  WRL    N L + V+
Sbjct: 74  LWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVL 133

Query: 333 QATY 337
           Q  Y
Sbjct: 134 QKKY 137

BLAST of Lcy02g010390 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 5.7e-16
Identity = 55/175 (31.43%), Postives = 92/175 (52.57%), Query Frame = 0

Query: 41  NSTY---LALIPK-LNNPKKMSDFRPISLCNVAYKIIAKVLVNRMKGVLQHIISENQSAF 100
           NS Y   + LIPK   +P K+ +FRPISL N+  KI+ K+L NR++  ++ II  +Q  F
Sbjct: 514 NSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGF 573

Query: 101 VSERSIFDNIIMGQECLHIIKSRREGRKGWLALKLDMSKAYDRVECSFLKRLMVKMGFHT 160
           +     + NI      +H I   ++  K  + + LD  KA+D+++  F+ +++ + G   
Sbjct: 574 IPGMQGWFNIRKSINVIHYINKLKD--KNHMIISLDAEKAFDKIQHPFMIKVLERSGIQG 633

Query: 161 KWVALIMDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLFLLCSEAFSSMI 212
            ++ +I         ++ +NG     I  + G RQG PLSPYLF +  E  +  I
Sbjct: 634 PYLNMIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVLARAI 686

BLAST of Lcy02g010390 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.1e-14
Identity = 52/169 (30.77%), Postives = 91/169 (53.85%), Query Frame = 0

Query: 45  LALIPKL-NNPKKMSDFRPISLCNVAYKIIAKVLVNRMKGVLQHIISENQSAFVSERSIF 104
           + LIPK   +P +  ++RPISL N+  KI+ K+L NR++  ++ II  +Q  F+     +
Sbjct: 513 ITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGW 572

Query: 105 DNIIMGQECLHIIKS-RREGRKGWLALKLDMSKAYDRVECSFLKRLMVKMGFHTKWVALI 164
            NI   ++ +++I+   +   K  + L +D  KA+D ++  F+ R + K+G    ++ LI
Sbjct: 573 FNI---RKSINVIQHINKLKNKDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLI 632

Query: 165 MDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLFLLCSEAFSSMI 212
                    +++LNGV   +   + G RQG PLSP LF +  E  +  I
Sbjct: 633 EAIYSKPTANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVMEVLAIAI 678

BLAST of Lcy02g010390 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.5e-13
Identity = 52/176 (29.55%), Postives = 92/176 (52.27%), Query Frame = 0

Query: 41  NSTY---LALIPKL-NNPKKMSDFRPISLCNVAYKIIAKVLVNRMKGVLQHIISENQSAF 100
           NS Y   + LIPK   +  K  +FRPISL N+  KI+ K+L NR++  ++ +I  +Q  F
Sbjct: 507 NSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGF 566

Query: 101 VSERSIFDNIIMGQECLHIIKS-RREGRKGWLALKLDMSKAYDRVECSFLKRLMVKMGFH 160
           +     + NI   ++ +++I+   R   K  + + +D  KA+D+++  F+ + + K+G  
Sbjct: 567 IPGMQGWFNI---RKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGID 626

Query: 161 TKWVALIMDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLFLLCSEAFSSMI 212
             ++ +I         +++LNG        + G RQG PLSP LF +  E  +  I
Sbjct: 627 GMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAI 679

BLAST of Lcy02g010390 vs. ExPASy TrEMBL
Match: M5XH01 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa017155mg PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 2.7e-93
Identity = 186/412 (45.15%), Postives = 242/412 (58.74%), Query Frame = 0

Query: 4   VLQDIQEKVTSNMNDQLLAPFTRGNIERAIKQMHPSK----------------------- 63
           V+  ++ +VT  MN  LLA FT   I+ A+ QMHPSK                       
Sbjct: 291 VVDGVRGRVTEEMNQALLAEFTPEEIKIALFQMHPSKAPGPDDFSPFFYQKYWQIVGEDM 350

Query: 64  -----------------NSTYLALIPKLNNPKKMSDFRPISLCNVAYKIIAKVLVNRMKG 123
                            N T++ALIPK++ PK M+  RPISLCNV  KI AKVL   +K 
Sbjct: 351 VAAVLHFFKTGKLLKKINFTHVALIPKVHEPKNMTQLRPISLCNVFNKIGAKVLATHLKA 410

Query: 124 VLQHIISENQSAFVSERSIFDNIIMGQECLHIIKSRREGRKGWLALKLDMSKAYDRVECS 183
           +L  +IS+ QSAF  +R+I DN I+  E LH++  +  GR+G+LALK+DMSKAYDRVE S
Sbjct: 411 ILPTLISDTQSAFAPDRAISDNSIVAFELLHMMHKKNHGRQGYLALKIDMSKAYDRVEWS 470

Query: 184 FLKRLMVKMGFHTKWVALIMDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLFLLC 243
           FL+ LM  MGF  +W+ LIM+ V T  +S +LNG P G ++PQRGLRQGDPLSPYLFLLC
Sbjct: 471 FLEALMKGMGFAPRWIQLIMEYVTTVSYSFMLNGNPVGYVIPQRGLRQGDPLSPYLFLLC 530

Query: 244 SEAFSSMIIGAMTRKTM---------------------------------------TVIK 303
           +EA SS+I+ A  R  +                                         I+
Sbjct: 531 AEALSSLILQAERRNLLHGVNLCRGAPSVSHLFFADDSFLFLSRRQCFNSLKERIWKKIQ 590

Query: 304 AWKGNLFSIGGKETLIKSVAQAIPTYIMSCFQIPQTLCDDLQQMMARFWWGSTNSKRKIH 337
            WK  L S+ GKE L+K VAQA+P Y+M+CF IP+ LCD++QQ+MAR+WWG  + +RKIH
Sbjct: 591 GWKAKLLSVAGKEILLKVVAQAVPIYMMNCFLIPKCLCDEIQQVMARYWWGEQDGQRKIH 650

BLAST of Lcy02g010390 vs. ExPASy TrEMBL
Match: A0A2N9HW04 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43776 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.6e-90
Identity = 191/452 (42.26%), Postives = 248/452 (54.87%), Query Frame = 0

Query: 2    DNVLQDIQEKVTSNMNDQLLAPFTRGNIERAIKQMHPSK--------------------- 61
            ++VL+ I   VT +MN +L  PF R  ++ AIKQM P K                     
Sbjct: 827  NSVLEGISPVVTVDMNTRLSQPFQRQEVDHAIKQMGPLKAPGPDGMSPIFYQTFWDSVGN 886

Query: 62   -------------------NSTYLALIPKLNNPKKMSDFRPISLCNVAYKIIAKVLVNRM 121
                               N TY+ LIPK  NP K+SDFRPISLCNV YKI++KVL NR+
Sbjct: 887  DVSSAILSCLNSGNILKSINHTYITLIPKKQNPTKVSDFRPISLCNVIYKILSKVLTNRL 946

Query: 122  KGVLQHIISENQSAFVSERSIFDNIIMGQECLHIIKSRREGRKGWLALKLDMSKAYDRVE 181
            K +L HIISE QSAFV  R I DNI++  E LH +K+R  G+ G++ALKLDMSKAYDRVE
Sbjct: 947  KSILPHIISETQSAFVPGRLITDNILVAFETLHHMKTRSTGKDGFMALKLDMSKAYDRVE 1006

Query: 182  CSFLKRLMVKMGFHTKWVALIMDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLFL 241
              FLK +M+KMGF+TKWV+L+M+C+ +  +S+L+NG P G + P RGLRQGDPLSPYLFL
Sbjct: 1007 WVFLKHVMLKMGFNTKWVSLMMECISSVSYSILINGSPQGLLKPTRGLRQGDPLSPYLFL 1066

Query: 242  LCSE--------------------AFSS-------------------------------- 301
            LC+E                    +FS                                 
Sbjct: 1067 LCAEGLHACYFAVQEEKNVRPSCISFSKYEVVSGQQINRDKTTLFFSKSTPGPKQSEILQ 1126

Query: 302  -----------------MIIGAMTRKTMTVIK--------AWKGNLFSIGGKETLIKSVA 337
                               +G   R++ T IK         WK  + S  G+E LIK+V 
Sbjct: 1127 ILGVPVVQEYEKYLGLPSFVGRSRRESFTQIKEKIWQRLQGWKQKILSQAGREILIKAVV 1186

BLAST of Lcy02g010390 vs. ExPASy TrEMBL
Match: A0A2N9I5I3 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47172 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 8.0e-90
Identity = 181/404 (44.80%), Postives = 243/404 (60.15%), Query Frame = 0

Query: 1    MDNVLQDIQEKVTSNMNDQLLAPFTRGNIERAIKQMHPSK-------------------- 60
            ++  L  +   V+ + N +LL PF+   +  A+ QMHPSK                    
Sbjct: 621  INETLMAVDSTVSQDANRKLLLPFSVDEVRVALFQMHPSKAPGTDGMTSFFFQKFWHVIG 680

Query: 61   --------------------NSTYLALIPKLNNPKKMSDFRPISLCNVAYKIIAKVLVNR 120
                                N T+++ IPK  NP+ MSD+RPISLCNV YKII+KVL NR
Sbjct: 681  PSVSTAVLSVLNSARILRKINLTHISPIPKKKNPEHMSDYRPISLCNVIYKIISKVLANR 740

Query: 121  MKGVLQHIISENQSAFVSERSIFDNIIMGQECLHIIKSRREGRKGWLALKLDMSKAYDRV 180
            +K VL  IIS +QSAFV  R I DN+ +  E +H +K +R+G+KG +ALKLDMSKAYDRV
Sbjct: 741  LKTVLPLIISYSQSAFVPGRLITDNVSVAFEIVHKLKGKRKGKKGEMALKLDMSKAYDRV 800

Query: 181  ECSFLKRLMVKMGFHTKWVALIMDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLF 240
            E  FL+ +M K+GF  +WV++IM CV+T ++SVLL+GVP G I+P RG+RQGDPLSPYLF
Sbjct: 801  EWDFLEAIMRKLGFDDQWVSVIMSCVRTVQYSVLLDGVPKGYIIPSRGIRQGDPLSPYLF 860

Query: 241  LLCSEAFSSMIIGAMTRKTMTVIKA-----WKGNLF-----------------------S 300
            LLC+E  S+++  A     +  I+      W  +LF                       +
Sbjct: 861  LLCAEGLSALLRQASISGRLRGIQTSHGGPWVSHLFFADDSLFFSHATIADSERFMDILN 920

Query: 301  IGGKETLIKSVAQAIPTYIMSCFQIPQTLCDDLQQMMARFWWGSTNSKRKIHWKKWDTLC 337
            + G+E LIK+VAQAIPTY M+CF++P+T C+++  ++AR+WWG  N +RK+HW +WD LC
Sbjct: 921  LAGREILIKAVAQAIPTYAMNCFKLPKTWCEEINSLIARYWWGQKNEERKLHWIRWDKLC 980

BLAST of Lcy02g010390 vs. ExPASy TrEMBL
Match: A0A2N9J7E4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61034 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 2.3e-89
Identity = 183/448 (40.85%), Postives = 241/448 (53.79%), Query Frame = 0

Query: 4    VLQDIQEKVTSNMNDQLLAPFTRGNIERAIKQMHPSK----------------------- 63
            VL  IQ  VT  MN  L++ FT   +  A+KQM P K                       
Sbjct: 808  VLDGIQPCVTQEMNQNLISQFTEAEVITAMKQMAPLKAPGPDGMPPIFYQSYWHVVGKDI 867

Query: 64   -----------------NSTYLALIPKLNNPKKMSDFRPISLCNVAYKIIAKVLVNRMKG 123
                             N TY+ LIPK   P++++++RPISLCNV YK+I+KVL NR+K 
Sbjct: 868  SSAVLYCLHSGTLLPSLNHTYVTLIPKTKCPERVTEYRPISLCNVIYKLISKVLANRLKK 927

Query: 124  VLQHIISENQSAFVSERSIFDNIIMGQECLHIIKSRREGRKGWLALKLDMSKAYDRVECS 183
            +L H+ISE+QSAFV  R I DNI++  E LH + +RR G+ G +ALKLDMSKAYDRVE  
Sbjct: 928  ILPHVISESQSAFVPGRLITDNILIAFETLHHMHNRRVGKVGSMALKLDMSKAYDRVEWG 987

Query: 184  FLKRLMVKMGFHTKWVALIMDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLFLLC 243
            FLK++MV+MGFH +W++LIM+C+ T  +S+L+NG PTG+I P RGLRQGDP+SPYLFLLC
Sbjct: 988  FLKQVMVRMGFHDRWISLIMECISTVTYSILINGNPTGHITPTRGLRQGDPISPYLFLLC 1047

Query: 244  SEAFSSMI---------------------------------------------------- 303
            +E  + +I                                                    
Sbjct: 1048 AEGLNGLIRKASFQGDIHGDSHNFMKKHLVNNSIEQRLPCSLARTPPKPSKKRIKEILGV 1107

Query: 304  -----------------------IGAMTRKTMTVIKAWKGNLFSIGGKETLIKSVAQAIP 337
                                      +  +  + +K WK  L S  G+E LIK+V QAIP
Sbjct: 1108 PSIQQYEKYLGLPSLIGKEKITCFSQIKERVWSKVKGWKEKLLSQAGREILIKAVVQAIP 1167

BLAST of Lcy02g010390 vs. ExPASy TrEMBL
Match: A0A2N9HYS7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44751 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.2e-88
Identity = 183/454 (40.31%), Postives = 241/454 (53.08%), Query Frame = 0

Query: 4    VLQDIQEKVTSNMNDQLLAPFTRGNIERAIKQMHPSK----------------------- 63
            VL  IQ  VT  MN  L++ FT   +  A+KQM P K                       
Sbjct: 814  VLDGIQPCVTQEMNQNLISQFTEAEVITAMKQMAPLKAPGPDGMPPIFYQSYWHVVGKDI 873

Query: 64   -----------------NSTYLALIPKLNNPKKMSDFRPISLCNVAYKIIAKVLVNRMKG 123
                             N TY+ LIPK   P++++++RPISLCNV YK+I+KVL NR+K 
Sbjct: 874  SSAVLYCLHSGTLLPSLNHTYVTLIPKTKCPERVTEYRPISLCNVIYKLISKVLANRLKK 933

Query: 124  VLQHIISENQSAFVSERSIFDNIIMGQECLHIIKSRREGRKGWLALKLDMSKAYDRVECS 183
            +L H+ISE+QSAFV  R I DNI++  E LH + +RR G+ G +ALKLDMSKAYDRVE  
Sbjct: 934  ILPHVISESQSAFVPGRLITDNILIAFETLHHMHNRRVGKVGSMALKLDMSKAYDRVEWG 993

Query: 184  FLKRLMVKMGFHTKWVALIMDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLFLLC 243
            FLK++MV+MGFH +W++LIM+C+ T  +S+L+NG PTG+I P RGLRQGDP+SPYLFLLC
Sbjct: 994  FLKQVMVRMGFHDRWISLIMECISTVTYSILINGNPTGHITPTRGLRQGDPISPYLFLLC 1053

Query: 244  SEAFSSMI---------------------------------------------------- 303
            +E  + +I                                                    
Sbjct: 1054 AEGLNGLIRKASFQGPLSLNAKRSRRFSQLYEKASGQQLNRAKTTLFFSKNTTQAKQEEI 1113

Query: 304  -----------------------------IGAMTRKTMTVIKAWKGNLFSIGGKETLIKS 337
                                            +  +  + +K WK  L S  G+E LIK+
Sbjct: 1114 KEILGVPSIQQYEKYLGLPSLIGKEKITCFSQIKERVWSKVKGWKEKLLSQAGREILIKA 1173

BLAST of Lcy02g010390 vs. NCBI nr
Match: XP_030934661.1 (uncharacterized protein LOC115960098 [Quercus lobata])

HSP 1 Score: 350.5 bits (898), Expect = 1.6e-92
Identity = 172/359 (47.91%), Postives = 239/359 (66.57%), Query Frame = 0

Query: 2   DNVLQDIQEKVTSNMNDQLLAPFTRGNIERAIKQMH----------------------PS 61
           DN+L+ +Q  VT  MNDQLL PF+R  IE A+ QM+                      P+
Sbjct: 389 DNILEAVQPSVTQEMNDQLLRPFSRDEIEAAMNQMNLPLPLALTVCSTVLECLNNCKIPA 448

Query: 62  K-NSTYLALIPKLNNPKKMSDFRPISLCNVAYKIIAKVLVNRMKGVLQHIISENQSAFVS 121
             N T + LIPK+ +P+ +++FRPISLCNV YK+ +KVL NR+K +L  ++SENQSAF +
Sbjct: 449 VINHTNITLIPKVKSPENITEFRPISLCNVVYKLASKVLANRLKVILPAVVSENQSAFQA 508

Query: 122 ERSIFDNIIMGQECLHIIKSRREGRKGWLALKLDMSKAYDRVECSFLKRLMVKMGFHTKW 181
            R I DN++M  E LH +K+ +  + G++ALKLDMSKAYDRVE  +L+++M KMGF   W
Sbjct: 509 GRVITDNVLMAFETLHYMKNHQSDKTGFMALKLDMSKAYDRVEWLYLEKIMRKMGFAENW 568

Query: 182 VALIMDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLFLLCSEAFSSMI-IGAMTR 241
           VAL+M+CV T  +S+L+NG P+  I P RG+RQGDPLSPYLFLLC+E  +       +  
Sbjct: 569 VALMMECVTTVSYSILINGEPSSVIRPLRGIRQGDPLSPYLFLLCTEGKNKKASFRYIKE 628

Query: 242 KTMTVIKAWKGNLFSIGGKETLIKSVAQAIPTYIMSCFQIPQTLCDDLQQMMARFWWGST 301
           +    ++ WK  L S  G E L+K+V QAIPTY MSCF++P TLC++++ ++ +FWWG  
Sbjct: 629 RVWAKLQGWKEQLLSQAGWEVLLKAVIQAIPTYAMSCFKLPITLCNEIESLIKKFWWGQR 688

Query: 302 NSKRKIHWKKWDTLCRPKEIGGLNFRNLVNFNKALLAKQVWRLYNNPNLLASRVIQATY 337
             +RKIHW KW +LC+PK +GG+ FR+L  FN A+LAKQVWRL    + L  R  +A +
Sbjct: 689 GEQRKIHWAKWSSLCKPKSLGGMGFRDLQKFNDAMLAKQVWRLLACEDSLFYRFFKAKF 747

BLAST of Lcy02g010390 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])

HSP 1 Score: 337.8 bits (865), Expect = 1.1e-88
Identity = 187/485 (38.56%), Postives = 247/485 (50.93%), Query Frame = 0

Query: 1   MDNVLQDIQEKVTSNMNDQLLAPFTRGNIERAIKQMHPSK-------------------- 60
           +  VL  I   VT  MN  L+  FTR  IE A+ QMHP+K                    
Sbjct: 245 ISEVLDAIPTTVTEEMNHSLIQEFTREEIETALNQMHPTKAPGPDGMSAIFFQKYWNIVG 304

Query: 61  --------------------NSTYLALIPKLNNPKKMSDFRPISLCNVAYKIIAKVLVNR 120
                               N T + L+PK+ NP KMSDFRPISLCNV YK+I+KVL NR
Sbjct: 305 NDIVCMVLDVLNSNMSMVEINKTNITLVPKIKNPTKMSDFRPISLCNVVYKLISKVLANR 364

Query: 121 MKGVLQHIISENQSAFVSERSIFDNIIMGQECLHIIKSRREGRKGWLALKLDMSKAYDRV 180
           +K +L  IISENQSAF+S R I DN+++  E +H ++ ++EG++G+ A+KLDMSKAYDRV
Sbjct: 365 LKNILPQIISENQSAFLSGRLITDNVLVAFELMHYLEHKKEGKEGFAAIKLDMSKAYDRV 424

Query: 181 ECSFLKRLMVKMGFHTKWVALIMDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLF 240
           E  F+K++M KMGFH KW+ L+M C+ +  +S+L+NG   G+I P RGLRQGDP+SPY+F
Sbjct: 425 EWGFIKQVMEKMGFHEKWIKLVMHCITSVSYSILVNGGAYGSITPTRGLRQGDPISPYIF 484

Query: 241 LLCSEAFSSM-------------------------------------------------- 300
           LLC++ FSS+                                                  
Sbjct: 485 LLCADGFSSLLNDVARKLRISGVSICRGCPKITHLFFADDSLLFCKANSQECQTLIDILQ 544

Query: 301 ---------------------------------------------------IIGAMTRKT 337
                                                              IIG    + 
Sbjct: 545 LYEDASGQKINVDKSSVFFSNNTPDEKRCEVLRMLGHMQDTRHKKYLGLPSIIGKSKVEI 604

BLAST of Lcy02g010390 vs. NCBI nr
Match: XP_023874626.1 (uncharacterized protein LOC111987155 [Quercus suber])

HSP 1 Score: 332.4 bits (851), Expect = 4.5e-87
Identity = 189/484 (39.05%), Postives = 245/484 (50.62%), Query Frame = 0

Query: 2   DNVLQDIQEKVTSNMNDQLLAPFTRGNIERAIKQMHPSK--------------------- 61
           D  L  I  +V+  MN  LLA F    +  A++QMHP+K                     
Sbjct: 214 DKSLSAISSRVSEEMNGDLLAVFKAEEVRVALQQMHPTKAPGPDGMSPIFYQKYWEIVDP 273

Query: 62  -------------------NSTYLALIPKLNNPKKMSDFRPISLCNVAYKIIAKVLVNRM 121
                              N TY+ LIPK+++P+K+++FRPISLCNV YKII+KVL NR+
Sbjct: 274 DVIECVLAVLNSGVLPCGINETYICLIPKVHSPQKITEFRPISLCNVVYKIISKVLANRL 333

Query: 122 KGVLQHIISENQSAFVSERSIFDNIIMGQECLHIIKSRREGRKGWLALKLDMSKAYDRVE 181
           KGVL+ +I E+QSAFV  RSI DN+++  E +H I  R++G++  +A+KLDMSKAYDRVE
Sbjct: 334 KGVLKEVIDESQSAFVPGRSIIDNVLVAFETMHYIGQRKKGKEALMAVKLDMSKAYDRVE 393

Query: 182 CSFLKRLMVKMGFHTKWVALIMDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLFL 241
            S+L+ ++ K+GFH KW+AL+M CV T  +SVL+NG P G IVP RGLRQGDP+SPYLFL
Sbjct: 394 WSYLEAILRKLGFHEKWIALMMMCVSTVTYSVLVNGEPKGKIVPSRGLRQGDPISPYLFL 453

Query: 242 LCSEAFSSMI-------------------------------------------------- 301
           LC+E  S+M+                                                  
Sbjct: 454 LCAEGLSAMLKKEECLGNLKGVAVSRGAPRVSHLLFADDSIIFCRASVEDCDRVIQILED 513

Query: 302 ---------------------------------------------------IGAMTRKTM 337
                                                              +G   RK  
Sbjct: 514 YETDSGQKLNKEKTSLFFSKNTKEEVQRHVKLKFGAEIIKHHEKYLGLPPMVGKGKRKAF 573

BLAST of Lcy02g010390 vs. NCBI nr
Match: XP_023878301.1 (uncharacterized protein LOC111990748 [Quercus suber])

HSP 1 Score: 331.3 bits (848), Expect = 1.0e-86
Identity = 184/485 (37.94%), Postives = 244/485 (50.31%), Query Frame = 0

Query: 1   MDNVLQDIQEKVTSNMNDQLLAPFTRGNIERAIKQMHPSK-------------------- 60
           ++ V + I  KVT  MN+ L+  FT+  +  A+KQ+HP+K                    
Sbjct: 369 IEEVTEAIPFKVTEEMNESLIREFTKEEVAVALKQIHPNKAPGPDGMSAVFFQKYWSIVG 428

Query: 61  --------------------NSTYLALIPKLNNPKKMSDFRPISLCNVAYKIIAKVLVNR 120
                               N T ++LIPK NNPK+M+DFRPISLCNV YK+I+K+L NR
Sbjct: 429 NNVTDMVLNVLNHNLPIPELNKTNISLIPKTNNPKRMTDFRPISLCNVVYKLISKILANR 488

Query: 121 MKGVLQHIISENQSAFVSERSIFDNIIMGQECLHIIKSRREGRKGWLALKLDMSKAYDRV 180
           +K +L HIISENQSAF S+R I DN+++  E +H +  +  G++G++A+KLDMSKA+DRV
Sbjct: 489 LKPLLPHIISENQSAFTSDRLITDNVLVAFELMHYLDHKTAGKEGFMAIKLDMSKAFDRV 548

Query: 181 ECSFLKRLMVKMGFHTKWVALIMDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLF 240
           E  F+ ++M +MGF  +W  L+M C+ +  +S+L+NGV  GNI P RGLRQGDPLSP LF
Sbjct: 549 EWGFIAKVMEQMGFCNRWRDLVMQCITSVSYSILINGVAHGNIYPSRGLRQGDPLSPSLF 608

Query: 241 LLCSEAFSSMIIGAMTRKTMTVIK------------------------------------ 300
           LLC+E  S++I  A   K +T I                                     
Sbjct: 609 LLCAEGLSALINQAARNKLITGISINRGCPKVTHLFFADDSILFCKAAYEECHLLRSILG 668

Query: 301 ------------------------------------------------------------ 337
                                                                       
Sbjct: 669 QYEEASGQKINTDKSSIFFSPNTAQETRDEIFNILGPMQNSRHTKYLGLPSLIGRSKSQV 728

BLAST of Lcy02g010390 vs. NCBI nr
Match: XP_042962672.1 (uncharacterized protein LOC122296942 [Carya illinoinensis])

HSP 1 Score: 328.2 bits (840), Expect = 8.5e-86
Identity = 187/485 (38.56%), Postives = 250/485 (51.55%), Query Frame = 0

Query: 1   MDNVLQDIQEKVTSNMNDQLLAPFTRGNIERAIKQMHPSK-------------------- 60
           M++VL  ++ +VT+ MN+ LL P+    +E A+KQMHPSK                    
Sbjct: 411 MEDVLSGVEARVTAEMNEDLLKPYVAEEVEVALKQMHPSKAPGPDGMPPLFFQKYWGMLG 470

Query: 61  --------------------NSTYLALIPKLNNPKKMSDFRPISLCNVAYKIIAKVLVNR 120
                               N T++ LIPK  +P K++DFRPISLCNV YKI++KV+ NR
Sbjct: 471 NSITTALLSALNSGMFPSGLNHTFITLIPKKASPSKVADFRPISLCNVLYKILSKVIANR 530

Query: 121 MKGVLQHIISENQSAFVSERSIFDNIIMGQECLHIIKSRREGRKGWLALKLDMSKAYDRV 180
           +K VL  IIS +QSAFV  R I DN+++  E LH ++++R+GRKG+++LKLDMSKAYDRV
Sbjct: 531 LKSVLPDIISASQSAFVPGRQISDNVLIAYELLHFLRNKRKGRKGFMSLKLDMSKAYDRV 590

Query: 181 ECSFLKRLMVKMGFHTKWVALIMDCVKTAKFSVLLNGVPTGNIVPQRGLRQGDPLSPYLF 240
           +  FL+++M  +GF  K ++LIM CV+T  FSVL+NG P G I+P RGLRQGDPLSPYLF
Sbjct: 591 DWLFLEKIMGSLGFDKKLISLIMQCVRTVSFSVLVNGSPKGPIIPSRGLRQGDPLSPYLF 650

Query: 241 LLCSEAFSSMI------------------------------------------------- 300
           LLC+E   S++                                                 
Sbjct: 651 LLCTEGLISLLKRNASREGVDGIRICRGAPRINHLLFADDSVIFCKADVITNVKIQSLLN 710

Query: 301 ----------------------------------------------------IGAMTRKT 337
                                                               +G   ++ 
Sbjct: 711 KYERASGQCINKEKTSMVFSKNVNDDLKRDIMQLWGGSYTQQYEKYLGPPPMVGRSKKQA 770

BLAST of Lcy02g010390 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 97.4 bits (241), Expect = 2.3e-20
Identity = 45/92 (48.91%), Postives = 61/92 (66.30%), Query Frame = 0

Query: 246 AIPTYIMSCFQIPQTLCDDLQQMMARFWWGSTNSKRKIHWKKWDTLCRPKE-IGGLNFRN 305
           A+P Y MSCF++ + LC  L   M  FWW S  +KRKI W  W  LC+ KE  GGL FR+
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 306 LVNFNKALLAKQVWRLYNNPNLLASRVIQATY 337
           L  FN+ALLAKQ +R+ + P+ L SR++++ Y
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRY 93

BLAST of Lcy02g010390 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 5.6e-19
Identity = 37/91 (40.66%), Postives = 59/91 (64.84%), Query Frame = 0

Query: 246 AIPTYIMSCFQIPQTLCDDLQQMMARFWWGSTNSKRKIHWKKWDTLCRPKEIGGLNFRNL 305
           A+PTY M+CF +P+T+C  +  ++A FWW +    + +HWK WD L   K  GG+ F+++
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 306 VNFNKALLAKQVWRLYNNPNLLASRVIQATY 337
             FN ALL KQ+WR+ + P  L ++V ++ Y
Sbjct: 62  EAFNLALLGKQMWRMLSRPESLMAKVFKSRY 92

BLAST of Lcy02g010390 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 69.7 bits (169), Expect = 5.1e-12
Identity = 31/83 (37.35%), Postives = 54/83 (65.06%), Query Frame = 0

Query: 77  LVNRMKGVLQHIISENQSAFVSERSIFDNIIMGQECLHIIKSRREGRKGWLALKLDMSKA 136
           +V R+K ++ ++I   Q++F+  R   DNI+  QE +H ++ R++G KGW+ LKLD+ KA
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMR-RKKGVKGWMLLKLDLEKA 60

Query: 137 YDRVECSFLKRLMVKMGFHTKWV 160
           YDR+   +L+  ++  GF   W+
Sbjct: 61  YDRIRWDYLEDTLISAGFPEVWL 82

BLAST of Lcy02g010390 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 58.9 bits (141), Expect = 9.0e-09
Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0

Query: 174 LLNGVPTGNIVPQRGLRQGDPLSPYLFLLCSEAFSSM 211
           ++NG P G + P RGLRQGDPLSPYLF+LC+E  S +
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGL 49

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P143813.5e-1834.30Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
P0C2F67.9e-1835.48Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
P113695.7e-1631.43LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... [more]
P085481.1e-1430.77LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1[more]
O003704.5e-1329.55LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
M5XH012.7e-9345.15Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa017155m... [more]
A0A2N9HW041.6e-9042.26Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9I5I38.0e-9044.80Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9J7E42.3e-8940.85Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61034 PE=4 SV=1[more]
A0A2N9HYS71.2e-8840.31Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44751 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_030934661.11.6e-9247.91uncharacterized protein LOC115960098 [Quercus lobata][more]
XP_023881891.11.1e-8838.56uncharacterized protein LOC111994244 [Quercus suber][more]
XP_023874626.14.5e-8739.05uncharacterized protein LOC111987155 [Quercus suber][more]
XP_023878301.11.0e-8637.94uncharacterized protein LOC111990748 [Quercus suber][more]
XP_042962672.18.5e-8638.56uncharacterized protein LOC122296942 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
ATMG00310.12.3e-2048.91RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT4G29090.15.6e-1940.66Ribonuclease H-like superfamily protein [more]
AT4G20520.15.1e-1237.35RNA binding;RNA-directed DNA polymerases [more]
ATMG01250.19.0e-0962.16RNA-directed DNA polymerase (reverse transcriptase) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 54..215
e-value: 1.3E-32
score: 113.2
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 41..334
NoneNo IPR availablePANTHERPTHR19446:SF440SUBFAMILY NOT NAMEDcoord: 41..334
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 43..220
e-value: 5.26861E-40
score: 138.578
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 44..211

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy02g010390.1Lcy02g010390.1mRNA