Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTTCTTCTTCTTCAAACAAACAAATCACAAAATGAAATCCATCAAAACAAAAACTTCCAAATCCAAATCCAAATCCACTGCTCCGCCGGCCGACCTTCTCGTCTGTTTTCCGGCACGTGCCCATCTCACTCTCTTGCCCAAGCCCGTCTGCAGTCCGGCCAGAGCTCCGGCCGAACCCCACCGCCGCCACCAGAAGAAACCGCCGCCGCCCCAAGCAAGTCCTCTGCTCTGGGCTAAGGAGATGGCGTCCGAGCCCACGTCCCCCAAGGTCACCTGCGCCGGCCAGATCAAAATCAGACCCCACGCCCATCGCTCCACCAAGAACTGGCAATCCGTCATGGAGGAAATCGAGCGAATTCACAGCAAGAAGAAAATGCCCACTTGGGGGAATCGAATTCAGACCCGAAATCAGACTCACAATCAAAACCCACTTGGATTCAAGAGAGAAATCGTCAATTTCCTCTCCTGTTTGCGAGGGTTTCGTTTCGATTTCCGTTGCTTCAGAGGCTTCCCTCAATCGGAAACCACGACCGACGAAGAAGACGAAGAATTCGAACCCGAATCCGAATCCGAATCCGACGAAGAACCCACCGAACCTTCGAGAAGAACCGTGTTCTCCAAATGGTTCATGGTTCTAGAGGAAGAAGAAACCAAACCCAGAAACGACGCCGTCTCTTCACTCGAGCTCCAGCCCTCCTCTGTTCCGCCGCCAAATGCTCTGTTACTGATGCGCTGCAGATCGGCCCCATCAATCGGCTGGATCGAACGGAAACCAAAACAAGACGAAGAAGATGAAGAAGAAGAAGAAAAGCAGTCGAAGATTAGCTTGAAGTTGTTAATGGAGGAAGAGAAGGAAGTGACTGCGAAGAAGGAAAGCTTGGTGGTGATGGATTATGATGCTGATTTTTACAGACTTTCATCGGACATTGCGAAGGAGACGTGGGTTGTGAGTGGATCGAGTAAATGTAGTGATGATCCATTGATCAGAAGTCGGAGTTGGAAGAGATGATGATTCAAGATTGAAGAAATTAATAACAAACCTTTCTGTTTATTATTTTTTTTTTTTTTGTTGGGTTTTGAATTTTGATGTTGTTCTTGAGTTACAGAGAAGGTTTAAGAGATGAAATTTCTG
mRNA sequence
CTTCTTCTTCTTCTTCAAACAAACAAATCACAAAATGAAATCCATCAAAACAAAAACTTCCAAATCCAAATCCAAATCCACTGCTCCGCCGGCCGACCTTCTCGTCTGTTTTCCGGCACGTGCCCATCTCACTCTCTTGCCCAAGCCCGTCTGCAGTCCGGCCAGAGCTCCGGCCGAACCCCACCGCCGCCACCAGAAGAAACCGCCGCCGCCCCAAGCAAGTCCTCTGCTCTGGGCTAAGGAGATGGCGTCCGAGCCCACGTCCCCCAAGGTCACCTGCGCCGGCCAGATCAAAATCAGACCCCACGCCCATCGCTCCACCAAGAACTGGCAATCCGTCATGGAGGAAATCGAGCGAATTCACAGCAAGAAGAAAATGCCCACTTGGGGGAATCGAATTCAGACCCGAAATCAGACTCACAATCAAAACCCACTTGGATTCAAGAGAGAAATCGTCAATTTCCTCTCCTGTTTGCGAGGGTTTCGTTTCGATTTCCGTTGCTTCAGAGGCTTCCCTCAATCGGAAACCACGACCGACGAAGAAGACGAAGAATTCGAACCCGAATCCGAATCCGAATCCGACGAAGAACCCACCGAACCTTCGAGAAGAACCGTGTTCTCCAAATGGTTCATGGTTCTAGAGGAAGAAGAAACCAAACCCAGAAACGACGCCGTCTCTTCACTCGAGCTCCAGCCCTCCTCTGTTCCGCCGCCAAATGCTCTGTTACTGATGCGCTGCAGATCGGCCCCATCAATCGGCTGGATCGAACGGAAACCAAAACAAGACGAAGAAGATGAAGAAGAAGAAGAAAAGCAGTCGAAGATTAGCTTGAAGTTGTTAATGGAGGAAGAGAAGGAAGTGACTGCGAAGAAGGAAAGCTTGGTGGTGATGGATTATGATGCTGATTTTTACAGACTTTCATCGGACATTGCGAAGGAGACGTGGGTTGTGAGTGGATCGAGTAAATGTAGTGATGATCCATTGATCAGAAGTCGGAGTTGGAAGAGATGATGATTCAAGATTGAAGAAATTAATAACAAACCTTTCTGTTTATTATTTTTTTTTTTTTTGTTGGGTTTTGAATTTTGATGTTGTTCTTGAGTTACAGAGAAGGTTTAAGAGATGAAATTTCTG
Coding sequence (CDS)
ATGAAATCCATCAAAACAAAAACTTCCAAATCCAAATCCAAATCCACTGCTCCGCCGGCCGACCTTCTCGTCTGTTTTCCGGCACGTGCCCATCTCACTCTCTTGCCCAAGCCCGTCTGCAGTCCGGCCAGAGCTCCGGCCGAACCCCACCGCCGCCACCAGAAGAAACCGCCGCCGCCCCAAGCAAGTCCTCTGCTCTGGGCTAAGGAGATGGCGTCCGAGCCCACGTCCCCCAAGGTCACCTGCGCCGGCCAGATCAAAATCAGACCCCACGCCCATCGCTCCACCAAGAACTGGCAATCCGTCATGGAGGAAATCGAGCGAATTCACAGCAAGAAGAAAATGCCCACTTGGGGGAATCGAATTCAGACCCGAAATCAGACTCACAATCAAAACCCACTTGGATTCAAGAGAGAAATCGTCAATTTCCTCTCCTGTTTGCGAGGGTTTCGTTTCGATTTCCGTTGCTTCAGAGGCTTCCCTCAATCGGAAACCACGACCGACGAAGAAGACGAAGAATTCGAACCCGAATCCGAATCCGAATCCGACGAAGAACCCACCGAACCTTCGAGAAGAACCGTGTTCTCCAAATGGTTCATGGTTCTAGAGGAAGAAGAAACCAAACCCAGAAACGACGCCGTCTCTTCACTCGAGCTCCAGCCCTCCTCTGTTCCGCCGCCAAATGCTCTGTTACTGATGCGCTGCAGATCGGCCCCATCAATCGGCTGGATCGAACGGAAACCAAAACAAGACGAAGAAGATGAAGAAGAAGAAGAAAAGCAGTCGAAGATTAGCTTGAAGTTGTTAATGGAGGAAGAGAAGGAAGTGACTGCGAAGAAGGAAAGCTTGGTGGTGATGGATTATGATGCTGATTTTTACAGACTTTCATCGGACATTGCGAAGGAGACGTGGGTTGTGAGTGGATCGAGTAAATGTAGTGATGATCCATTGATCAGAAGTCGGAGTTGGAAGAGATGA
Protein sequence
MKSIKTKTSKSKSKSTAPPADLLVCFPARAHLTLLPKPVCSPARAPAEPHRRHQKKPPPPQASPLLWAKEMASEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHSKKKMPTWGNRIQTRNQTHNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSETTTDEEDEEFEPESESESDEEPTEPSRRTVFSKWFMVLEEEETKPRNDAVSSLELQPSSVPPPNALLLMRCRSAPSIGWIERKPKQDEEDEEEEEKQSKISLKLLMEEEKEVTAKKESLVVMDYDADFYRLSSDIAKETWVVSGSSKCSDDPLIRSRSWKR
Homology
BLAST of Lcy01g013050 vs. ExPASy TrEMBL
Match:
A0A6J1HD24 (uncharacterized protein LOC111462985 OS=Cucurbita moschata OX=3662 GN=LOC111462985 PE=4 SV=1)
HSP 1 Score: 471.9 bits (1213), Expect = 2.2e-129
Identity = 254/322 (78.88%), Postives = 278/322 (86.34%), Query Frame = 0
Query: 17 APPADLLVCFPARAHLTLLPKPVCSPARAPAEPHRRHQKKPPPP---QASPLLWAKEMAS 76
APPADLLVCFPARA LTLLPKP CSPARA AEPHRRHQKK PPP QASPLLWAKEMAS
Sbjct: 2 APPADLLVCFPARARLTLLPKPTCSPARASAEPHRRHQKKAPPPSQSQASPLLWAKEMAS 61
Query: 77 EPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHSKKKMPTWGNRIQTRNQTHNQNP 136
EPTSPKVTCAGQIKI+PHA RSTKNWQSVMEEIERIH KKK+P WGN+I+ +QNP
Sbjct: 62 EPTSPKVTCAGQIKIKPHARRSTKNWQSVMEEIERIHKKKKIPNWGNQIR------DQNP 121
Query: 137 LGFKREIVNFLSCLRGFRFDFRCFRGFPQSETTTDEEDEEFEPESESESDEEPTEPS--R 196
GFKREIVNFLSCLRGFRFDFRCFRGFP+S+ T EE++E E ESE+E +EEPTE + R
Sbjct: 122 FGFKREIVNFLSCLRGFRFDFRCFRGFPESDDITTEEEDEEEYESEAEYEEEPTEATSKR 181
Query: 197 RTVFSKWFMVL------EEEETKPRNDAVSSLELQPSSVPPPNALLLMRCRSAPSIGWIE 256
RT+FSKWFMVL EEEETKPRND + ELQP SVPPPNALLLMRCRSAPS GWIE
Sbjct: 182 RTMFSKWFMVLQDEEEDEEEETKPRND---TGELQPCSVPPPNALLLMRCRSAPSTGWIE 241
Query: 257 RKPKQDEEDEEEEEKQSKISLKLLMEEEKEVTAKKESLVVMDYDADFYRLSSDIAKETWV 316
RKPKQ+++++E+EEKQSKISLKLLMEEEK AKKESLVVMDYDADFY+LSSDIAKETWV
Sbjct: 242 RKPKQEQQEQEQEEKQSKISLKLLMEEEKVAVAKKESLVVMDYDADFYKLSSDIAKETWV 301
Query: 317 VSG--SSKCSDDPLIRSRSWKR 326
VSG SS+C+DDP +RSRSWKR
Sbjct: 302 VSGSSSSRCNDDPFLRSRSWKR 314
BLAST of Lcy01g013050 vs. ExPASy TrEMBL
Match:
A0A5A7V8Z9 (Myotubularin-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001440 PE=4 SV=1)
HSP 1 Score: 433.3 bits (1113), Expect = 8.7e-118
Identity = 254/343 (74.05%), Postives = 280/343 (81.63%), Query Frame = 0
Query: 1 MKSIKTKTSKSKSKSTAPPADLLVCFPARAHLTLLPKPVCSPARAPAEPHRRHQKKPPPP 60
M+S+K + + SKSK TAPPADLLVCFPARAHLTLLP SPARAPAEPHRRH +K P
Sbjct: 1 MRSMK-RRNHSKSKPTAPPADLLVCFPARAHLTLLP----SPARAPAEPHRRHYRKAQP- 60
Query: 61 QASPLLWAKEMASEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHSKKKMPTWGN 120
SPL WAKEM+SEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIH+KKK
Sbjct: 61 --SPLPWAKEMSSEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHNKKK------ 120
Query: 121 RIQTRNQTHNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSETTTDEED------EEF 180
N NQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQS+ TTD+ED E+
Sbjct: 121 -----NPIRNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDDEDDEEEEFEQH 180
Query: 181 EPESESESDEEPTEPSRRTVFSKWFMVL--EEEETKP-RNDAVSSLELQPS--SVPPPNA 240
EPESESES+ E RT+FS+WFMVL EEEETKP NDAVSSLE QPS SVPPPNA
Sbjct: 181 EPESESESESEEEPTRGRTMFSEWFMVLQEEEEETKPINNDAVSSLEFQPSSVSVPPPNA 240
Query: 241 LLLMRCRSAPSIGWIERKPKQDEEDEEEEEKQSKISLKLLMEEEKE-VTAKKESLVVMDY 300
LLLMRCRSAP+ + RKPKQ++E E+EEE++SKISLKLLMEEEKE VTAKK+SL+VMDY
Sbjct: 241 LLLMRCRSAPNS--LLRKPKQEQEQEQEEEEKSKISLKLLMEEEKEMVTAKKKSLMVMDY 300
Query: 301 DADFYRLSSDIAKETWVVSG------SSKCSDDPLIRSRSWKR 326
DADFY+LSSDIAKETWVVSG SS+C+DDPL+RSRSWKR
Sbjct: 301 DADFYKLSSDIAKETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 322
BLAST of Lcy01g013050 vs. ExPASy TrEMBL
Match:
A0A1S3BDB9 (uncharacterized protein LOC103488403 OS=Cucumis melo OX=3656 GN=LOC103488403 PE=4 SV=1)
HSP 1 Score: 427.6 bits (1098), Expect = 4.8e-116
Identity = 251/338 (74.26%), Postives = 275/338 (81.36%), Query Frame = 0
Query: 7 KTSKSKSKSTAPPADLLVCFPARAHLTLLPKPVCSPARAPAEPHRRHQKKPPPPQASPLL 66
+ + SKSK TAPPADLLVCFPARAHLTLLP SPARAPAEPHRRH +K P SPL
Sbjct: 3 RRNHSKSKPTAPPADLLVCFPARAHLTLLP----SPARAPAEPHRRHYRKAQP---SPLP 62
Query: 67 WAKEMASEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHSKKKMPTWGNRIQTRN 126
WAKEM+SEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIH+KKK N
Sbjct: 63 WAKEMSSEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHNKKK-----------N 122
Query: 127 QTHNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSETTTDEED------EEFEPESES 186
NQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQS+ TTD+ED E+ EPESES
Sbjct: 123 PIRNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDDEDDEEEEFEQHEPESES 182
Query: 187 ESDEEPTEPSRRTVFSKWFMVL--EEEETKP-RNDAVSSLELQPS--SVPPPNALLLMRC 246
ES+ E RT+FS+WFMVL EEEETKP NDAVSSLE QPS SVPPPNALLLMRC
Sbjct: 183 ESESEEEPTRGRTMFSEWFMVLQEEEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRC 242
Query: 247 RSAPSIGWIERKPKQDEEDE-EEEEKQSKISLKLLMEEEKE-VTAKKESLVVMDYDADFY 306
RSAP+ + RKPKQ++E E E+EE++SKISLKLLMEEEKE VTAKK+SL+VMDYDADFY
Sbjct: 243 RSAPNS--LLRKPKQEQEQEQEQEEEKSKISLKLLMEEEKEMVTAKKKSLMVMDYDADFY 302
Query: 307 RLSSDIAKETWVVSG------SSKCSDDPLIRSRSWKR 326
+LSSDIAKETWVVSG SS+C+DDPL+RSRSWKR
Sbjct: 303 KLSSDIAKETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 320
BLAST of Lcy01g013050 vs. ExPASy TrEMBL
Match:
A0A0A0LMI6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345900 PE=4 SV=1)
HSP 1 Score: 422.2 bits (1084), Expect = 2.0e-114
Identity = 251/351 (71.51%), Postives = 279/351 (79.49%), Query Frame = 0
Query: 1 MKSIKTKTSKSKSKSTAPPADLLVCFPARAHLTLLPKPVCSPARAPAEPHRRHQKKPPPP 60
M+S+K + + SKSK TAPPADLLVCFPARAHLTLLP SPAR PAEPHRRH +K P
Sbjct: 1 MRSMK-RRNHSKSKPTAPPADLLVCFPARAHLTLLP----SPARPPAEPHRRHYRKAQP- 60
Query: 61 QASPLLWAKEMASEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHSKKKMPTWGN 120
SPL WAKEM+SEPTSPKVTCAGQIKIRPH+HRSTKNWQSVMEEIERIH+KKK
Sbjct: 61 --SPLPWAKEMSSEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKK------ 120
Query: 121 RIQTRNQTHNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSETTTDEED------EEF 180
N NQNP GFKREIVNFLSCLRGFRFDFRCFRGFPQS+ TTD+ED E+
Sbjct: 121 -----NPIRNQNPFGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDDEDDEEEVFEQH 180
Query: 181 EPESESESDEEPTEPSRRTVFSKWFMVLE--EEETKP-RNDAVSSLELQPS--SVPPPNA 240
EPESES+S+ E RT+FS+WFMVL+ EEETKP NDAVSSLE QPS SVPPPNA
Sbjct: 181 EPESESQSESEEEPTRGRTMFSEWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPPPNA 240
Query: 241 LLLMRCRSAPSIGWIERKPKQ--------DEEDEEEEEKQSKISLKLLMEEEKE-VTAKK 300
LLLMRCRSAP+ + RKPKQ +EE+EEEEE++SKISLKLLMEEEKE VTAKK
Sbjct: 241 LLLMRCRSAPNS--LLRKPKQQEEKEEEEEEEEEEEEEEKSKISLKLLMEEEKEMVTAKK 300
Query: 301 ESLVVMDYDADFYRLSSDIAKETWVVSG------SSKCSDDPLIRSRSWKR 326
+SL+VMDYDADFY+LSSDIAKETWVVSG SS+C+DDPL+RSRSWKR
Sbjct: 301 KSLMVMDYDADFYKLSSDIAKETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 330
BLAST of Lcy01g013050 vs. ExPASy TrEMBL
Match:
A0A6J1KE65 (uncharacterized protein LOC111492421 OS=Cucurbita maxima OX=3661 GN=LOC111492421 PE=4 SV=1)
HSP 1 Score: 415.6 bits (1067), Expect = 1.9e-112
Identity = 241/348 (69.25%), Postives = 260/348 (74.71%), Query Frame = 0
Query: 1 MKSIKTKTSKSKSKSTAPPADLLVCFPARAHLTLLPKPVCSPARAPAEPHRRHQKKPPP- 60
MKS+KT+ + K KS APPADLLVCFPARA LTLLPKP CSPARA AEPHRRHQKK PP
Sbjct: 1 MKSMKTR-NNPKPKSIAPPADLLVCFPARARLTLLPKPTCSPARASAEPHRRHQKKAPPL 60
Query: 61 --PQASPLLWAKEMASEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHSKKKMPT 120
QASPLLWAKE+ASEPTSPKVTCAGQIKI+PHA RSTKNWQSVMEEIERIH KKK+P
Sbjct: 61 SQSQASPLLWAKELASEPTSPKVTCAGQIKIKPHARRSTKNWQSVMEEIERIHKKKKIPN 120
Query: 121 WGNRIQTRNQTHNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSETTTDEEDEEFEPE 180
WGN+IQ +QNP GFKREIVNFLSCLRGFRFDFRCF+GFP+S+ T EE+EE E E
Sbjct: 121 WGNQIQ------DQNPFGFKREIVNFLSCLRGFRFDFRCFKGFPESDDITTEEEEEEEEE 180
Query: 181 SESESD--------EEPTEPS--RRTVFSKWFMVL--------EEEETKPRNDAVSSLEL 240
E ESD EEPTE + RRT+FSKWFMVL EEEETKPRND + EL
Sbjct: 181 EEYESDAESEAEYEEEPTEATSKRRTMFSKWFMVLQNEEEEEEEEEETKPRND---TGEL 240
Query: 241 QPSSVPPPNALLLMRCRSAPSIGWIERKPKQDEEDEEEEEKQSKISLKLLMEEEKEVTAK 300
QP SVPPPNALLLMRC SLKLLMEEEKE AK
Sbjct: 241 QPCSVPPPNALLLMRC-----------------------------SLKLLMEEEKEAVAK 300
Query: 301 KESLVVMDYDADFYRLSSDIAKETWVVSGS--SKCSDDPLIRSRSWKR 326
KESLVVMDYDADFY+LSSDIAKETWVVSGS S+C+DDP +RSRSWKR
Sbjct: 301 KESLVVMDYDADFYKLSSDIAKETWVVSGSSTSRCNDDPFLRSRSWKR 309
BLAST of Lcy01g013050 vs. NCBI nr
Match:
KAG6598680.1 (hypothetical protein SDJN03_08458, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 479.9 bits (1234), Expect = 1.7e-131
Identity = 259/327 (79.20%), Postives = 282/327 (86.24%), Query Frame = 0
Query: 12 KSKSTAPPADLLVCFPARAHLTLLPKPVCSPARAPAEPHRRHQKKPPPP---QASPLLWA 71
K KS APPADLLVCFPARA LTLLPKP CSPARA AEPHRRHQKK PPP QASPLLWA
Sbjct: 8 KPKSMAPPADLLVCFPARARLTLLPKPTCSPARASAEPHRRHQKKAPPPSQSQASPLLWA 67
Query: 72 KEMASEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHSKKKMPTWGNRIQTRNQT 131
KEMASEPTSPKVTCAGQIKI+PHA RSTKNWQSVMEEIERIH KKK+P WGN+IQ
Sbjct: 68 KEMASEPTSPKVTCAGQIKIKPHARRSTKNWQSVMEEIERIHKKKKIPNWGNQIQ----- 127
Query: 132 HNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSETTTDEEDEEFEPESESESDEEPTE 191
+QNP GFKREIVNFLSCLRGFRFDFRCFRGFP+S+ T EE++E E ESE+E +EEPTE
Sbjct: 128 -DQNPFGFKREIVNFLSCLRGFRFDFRCFRGFPESDDITTEEEDEEEYESEAEYEEEPTE 187
Query: 192 PS--RRTVFSKWFMVL------EEEETKPRNDAVSSLELQPSSVPPPNALLLMRCRSAPS 251
+ RRT+FSKWFMVL EEEETKPRND + ELQP SVPPPNALLLMRCRSAPS
Sbjct: 188 ATSKRRTMFSKWFMVLQDEEEDEEEETKPRND---TGELQPCSVPPPNALLLMRCRSAPS 247
Query: 252 IGWIERKPKQDEEDEEEEEKQSKISLKLLMEEEKEVTAKKESLVVMDYDADFYRLSSDIA 311
GWIERKPKQ+++++E+EEKQSKISLKLLMEEEKE AKKESLVVMDYDADFY+LSSDIA
Sbjct: 248 TGWIERKPKQEQQEQEQEEKQSKISLKLLMEEEKEAVAKKESLVVMDYDADFYKLSSDIA 307
Query: 312 KETWVVSG--SSKCSDDPLIRSRSWKR 326
KETWVVSG SS+C+DDP +RSRSWKR
Sbjct: 308 KETWVVSGSSSSRCNDDPFLRSRSWKR 325
BLAST of Lcy01g013050 vs. NCBI nr
Match:
XP_023546364.1 (uncharacterized protein LOC111805493 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 474.9 bits (1221), Expect = 5.4e-130
Identity = 261/333 (78.38%), Postives = 285/333 (85.59%), Query Frame = 0
Query: 9 SKSKSKSTAPPADLLVCFPARAHLTLLPKPVCSPARAPAEPHRRHQKKPPPP---QASPL 68
+ +K KS APPADLLVCFPARA LTLLPKP CSPARA AEPHRRHQKK PPP QASPL
Sbjct: 5 NNTKPKSIAPPADLLVCFPARARLTLLPKPTCSPARASAEPHRRHQKKAPPPSQSQASPL 64
Query: 69 LWAKEMASEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHSKKKMPTWGNRIQTR 128
LWAKEMASEPTSPKVTCAGQIKI+PHA RSTKNWQSVMEEIERIH KKK+P WGN+IQ
Sbjct: 65 LWAKEMASEPTSPKVTCAGQIKIKPHARRSTKNWQSVMEEIERIHKKKKIPNWGNQIQ-- 124
Query: 129 NQTHNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQS-ETTTDEEDE---EFEPESESE 188
+QNP GFKREIVNFLSCLRGFRFDFRCFRGFP+S + TT+EEDE E EPESE+E
Sbjct: 125 ----DQNPFGFKREIVNFLSCLRGFRFDFRCFRGFPESDDITTEEEDEEEYESEPESEAE 184
Query: 189 SDEEPTEPS--RRTVFSKWFMVL-----EEEETKPRNDAVSSLELQPSSVPPPNALLLMR 248
+E TE + RRT+FSKWFMVL EEEETKPRND + ELQP SVPPPNALLLMR
Sbjct: 185 YEEAHTEATSKRRTMFSKWFMVLQDEEEEEEETKPRND---TGELQPCSVPPPNALLLMR 244
Query: 249 CRSAPSIGWIERKPKQDEEDEEEEEKQSKISLKLLMEEEKEVTAKKESLVVMDYDADFYR 308
CRSAPS GWIERKPKQ+++++E+EEKQSKISLKLLMEEEKE AKKESLVVMDYDADFY+
Sbjct: 245 CRSAPSTGWIERKPKQEQQEQEQEEKQSKISLKLLMEEEKEAVAKKESLVVMDYDADFYK 304
Query: 309 LSSDIAKETWVVSGS--SKCSDDPLIRSRSWKR 326
LSSDIAKETWVVSGS S+C+DDP +RSRSWKR
Sbjct: 305 LSSDIAKETWVVSGSSTSRCNDDPFLRSRSWKR 328
BLAST of Lcy01g013050 vs. NCBI nr
Match:
XP_022962582.1 (uncharacterized protein LOC111462985 [Cucurbita moschata])
HSP 1 Score: 471.9 bits (1213), Expect = 4.6e-129
Identity = 254/322 (78.88%), Postives = 278/322 (86.34%), Query Frame = 0
Query: 17 APPADLLVCFPARAHLTLLPKPVCSPARAPAEPHRRHQKKPPPP---QASPLLWAKEMAS 76
APPADLLVCFPARA LTLLPKP CSPARA AEPHRRHQKK PPP QASPLLWAKEMAS
Sbjct: 2 APPADLLVCFPARARLTLLPKPTCSPARASAEPHRRHQKKAPPPSQSQASPLLWAKEMAS 61
Query: 77 EPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHSKKKMPTWGNRIQTRNQTHNQNP 136
EPTSPKVTCAGQIKI+PHA RSTKNWQSVMEEIERIH KKK+P WGN+I+ +QNP
Sbjct: 62 EPTSPKVTCAGQIKIKPHARRSTKNWQSVMEEIERIHKKKKIPNWGNQIR------DQNP 121
Query: 137 LGFKREIVNFLSCLRGFRFDFRCFRGFPQSETTTDEEDEEFEPESESESDEEPTEPS--R 196
GFKREIVNFLSCLRGFRFDFRCFRGFP+S+ T EE++E E ESE+E +EEPTE + R
Sbjct: 122 FGFKREIVNFLSCLRGFRFDFRCFRGFPESDDITTEEEDEEEYESEAEYEEEPTEATSKR 181
Query: 197 RTVFSKWFMVL------EEEETKPRNDAVSSLELQPSSVPPPNALLLMRCRSAPSIGWIE 256
RT+FSKWFMVL EEEETKPRND + ELQP SVPPPNALLLMRCRSAPS GWIE
Sbjct: 182 RTMFSKWFMVLQDEEEDEEEETKPRND---TGELQPCSVPPPNALLLMRCRSAPSTGWIE 241
Query: 257 RKPKQDEEDEEEEEKQSKISLKLLMEEEKEVTAKKESLVVMDYDADFYRLSSDIAKETWV 316
RKPKQ+++++E+EEKQSKISLKLLMEEEK AKKESLVVMDYDADFY+LSSDIAKETWV
Sbjct: 242 RKPKQEQQEQEQEEKQSKISLKLLMEEEKVAVAKKESLVVMDYDADFYKLSSDIAKETWV 301
Query: 317 VSG--SSKCSDDPLIRSRSWKR 326
VSG SS+C+DDP +RSRSWKR
Sbjct: 302 VSGSSSSRCNDDPFLRSRSWKR 314
BLAST of Lcy01g013050 vs. NCBI nr
Match:
KAA0064832.1 (myotubularin-related protein [Cucumis melo var. makuwa])
HSP 1 Score: 433.3 bits (1113), Expect = 1.8e-117
Identity = 254/343 (74.05%), Postives = 280/343 (81.63%), Query Frame = 0
Query: 1 MKSIKTKTSKSKSKSTAPPADLLVCFPARAHLTLLPKPVCSPARAPAEPHRRHQKKPPPP 60
M+S+K + + SKSK TAPPADLLVCFPARAHLTLLP SPARAPAEPHRRH +K P
Sbjct: 1 MRSMK-RRNHSKSKPTAPPADLLVCFPARAHLTLLP----SPARAPAEPHRRHYRKAQP- 60
Query: 61 QASPLLWAKEMASEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHSKKKMPTWGN 120
SPL WAKEM+SEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIH+KKK
Sbjct: 61 --SPLPWAKEMSSEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHNKKK------ 120
Query: 121 RIQTRNQTHNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSETTTDEED------EEF 180
N NQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQS+ TTD+ED E+
Sbjct: 121 -----NPIRNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDDEDDEEEEFEQH 180
Query: 181 EPESESESDEEPTEPSRRTVFSKWFMVL--EEEETKP-RNDAVSSLELQPS--SVPPPNA 240
EPESESES+ E RT+FS+WFMVL EEEETKP NDAVSSLE QPS SVPPPNA
Sbjct: 181 EPESESESESEEEPTRGRTMFSEWFMVLQEEEEETKPINNDAVSSLEFQPSSVSVPPPNA 240
Query: 241 LLLMRCRSAPSIGWIERKPKQDEEDEEEEEKQSKISLKLLMEEEKE-VTAKKESLVVMDY 300
LLLMRCRSAP+ + RKPKQ++E E+EEE++SKISLKLLMEEEKE VTAKK+SL+VMDY
Sbjct: 241 LLLMRCRSAPNS--LLRKPKQEQEQEQEEEEKSKISLKLLMEEEKEMVTAKKKSLMVMDY 300
Query: 301 DADFYRLSSDIAKETWVVSG------SSKCSDDPLIRSRSWKR 326
DADFY+LSSDIAKETWVVSG SS+C+DDPL+RSRSWKR
Sbjct: 301 DADFYKLSSDIAKETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 322
BLAST of Lcy01g013050 vs. NCBI nr
Match:
XP_008445342.2 (PREDICTED: uncharacterized protein LOC103488403 [Cucumis melo])
HSP 1 Score: 427.6 bits (1098), Expect = 9.9e-116
Identity = 251/338 (74.26%), Postives = 275/338 (81.36%), Query Frame = 0
Query: 7 KTSKSKSKSTAPPADLLVCFPARAHLTLLPKPVCSPARAPAEPHRRHQKKPPPPQASPLL 66
+ + SKSK TAPPADLLVCFPARAHLTLLP SPARAPAEPHRRH +K P SPL
Sbjct: 3 RRNHSKSKPTAPPADLLVCFPARAHLTLLP----SPARAPAEPHRRHYRKAQP---SPLP 62
Query: 67 WAKEMASEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHSKKKMPTWGNRIQTRN 126
WAKEM+SEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIH+KKK N
Sbjct: 63 WAKEMSSEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHNKKK-----------N 122
Query: 127 QTHNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSETTTDEED------EEFEPESES 186
NQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQS+ TTD+ED E+ EPESES
Sbjct: 123 PIRNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDDEDDEEEEFEQHEPESES 182
Query: 187 ESDEEPTEPSRRTVFSKWFMVL--EEEETKP-RNDAVSSLELQPS--SVPPPNALLLMRC 246
ES+ E RT+FS+WFMVL EEEETKP NDAVSSLE QPS SVPPPNALLLMRC
Sbjct: 183 ESESEEEPTRGRTMFSEWFMVLQEEEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRC 242
Query: 247 RSAPSIGWIERKPKQDEEDE-EEEEKQSKISLKLLMEEEKE-VTAKKESLVVMDYDADFY 306
RSAP+ + RKPKQ++E E E+EE++SKISLKLLMEEEKE VTAKK+SL+VMDYDADFY
Sbjct: 243 RSAPNS--LLRKPKQEQEQEQEQEEEKSKISLKLLMEEEKEMVTAKKKSLMVMDYDADFY 302
Query: 307 RLSSDIAKETWVVSG------SSKCSDDPLIRSRSWKR 326
+LSSDIAKETWVVSG SS+C+DDPL+RSRSWKR
Sbjct: 303 KLSSDIAKETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 320
BLAST of Lcy01g013050 vs. TAIR 10
Match:
AT1G78110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1); Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4; Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205; Viruses - 141; Other Eukaryotes - 2649 (source: NCBI BLink). )
HSP 1 Score: 238.4 bits (607), Expect = 7.9e-63
Identity = 166/366 (45.36%), Postives = 211/366 (57.65%), Query Frame = 0
Query: 4 IKTKTSKSKSKSTAPPADLLVCFPARAHLTLLPKPVCSPAR-----APAEPHRRHQKKP- 63
IK S S+ ADLLVCFP+R HL L PKP+CSP+R PH R Q
Sbjct: 2 IKGNNGNRGSSSSGYSADLLVCFPSRTHLALTPKPICSPSRPSDSSTNRRPHHRRQLSKL 61
Query: 64 ----PPPQASPLLWAKEMAS---------EPTSPKVTCAGQIKIRP-HAHRSTKNWQSVM 123
SP+LWAK+ +S EPTSPKVTCAGQIK+RP KNWQSVM
Sbjct: 62 SGGGGGGHGSPVLWAKQASSKNMGGDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVM 121
Query: 124 EEIERIHSKKKMPTWGNRIQTRNQTHNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQS 183
EEIERIH NR Q++ G K++++ FL+CLR +FDFRCF F +
Sbjct: 122 EEIERIHD--------NRSQSKF-------FGLKKDVMGFLTCLRNIKFDFRCFGDFRHA 181
Query: 184 ETTTDEEDEEFEPESESES-DEEPTEPSRRTVFSKWFMVLEEEETKPRNDA--------- 243
+ T+D+++EE + + E E E E + +TVFSKWFMVL+EE+ +D
Sbjct: 182 DVTSDDDEEEDDDDDEEEEVVEGEEEENSKTVFSKWFMVLQEEQNNKDDDKNNNKCDEKR 241
Query: 244 -VSSLELQPSSVPPPNALLLMRCRSAPSIGWIER----KPKQDEEDEEEEEKQS------ 303
+ E +P +VPPPNALLLMRCRSAP+ W+E K +Q++ +E++EEK++
Sbjct: 242 DLEDTETEP-AVPPPNALLLMRCRSAPAKSWLEERMKVKTEQEKREEQKEEKETEDQETS 301
Query: 304 ----KISLKLLMEEEKEVTAKKESLVVMDYDADFYRLSSDIAKETWVVSGSSKCSDDPLI 325
K L+ LMEEE K LV+M YD +FYRLSSDIAKETWVV G DPL
Sbjct: 302 MKTKKKDLRSLMEEE------KMELVLMRYDTEFYRLSSDIAKETWVVGG----IQDPLS 341
BLAST of Lcy01g013050 vs. TAIR 10
Match:
AT1G22230.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78110.1); Has 2358 Blast hits to 1759 proteins in 159 species: Archae - 2; Bacteria - 36; Metazoa - 1046; Fungi - 203; Plants - 157; Viruses - 72; Other Eukaryotes - 842 (source: NCBI BLink). )
HSP 1 Score: 211.5 bits (537), Expect = 1.0e-54
Identity = 152/338 (44.97%), Postives = 195/338 (57.69%), Query Frame = 0
Query: 14 KSTAPPADLLVCFPARAHLTLLPKPVCSPA-----RAPAEPHRRHQKKPPPPQASPLL-- 73
KS+ ADL+VCFP+RAHL+L K + SP+ R A HRR K
Sbjct: 8 KSSGYSADLMVCFPSRAHLSLPSKSISSPSSSFNRRQNAPHHRRSISKLSSSGGGVRQNR 67
Query: 74 -WAKEMASEPTSPKVTCAGQIKIRPHAH-RSTKNWQSVMEEIERIHSKKKMPTWGNRIQT 133
+E+ EPTSPKVTCAGQIK+R KNWQS+M EIE+IH K +
Sbjct: 68 GGGREVVEEPTSPKVTCAGQIKVRSSKRDGGGKNWQSLMAEIEKIHRSKSESKF------ 127
Query: 134 RNQTHNQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSETTTDEEDEEFEPESESESDE 193
G KR+++ FL+CLR FDFRCF FP + +D+E+E+ E E E E ++
Sbjct: 128 ---------FGIKRDVMGFLTCLRD--FDFRCFGAFPPVDIISDDEEEDEEEEEEDEEED 187
Query: 194 EPTEPSRRTVFSKWFMVLEEEETKP-----RNDAVSSLELQPSSVPPPNALLLMRCRSAP 253
E + S TVFSKW MVL E++ + + S +E ++VPPPNALLLMRCRSAP
Sbjct: 188 E--DESSGTVFSKWLMVLHEKQNNEECVDGKENVFSDVE---TAVPPPNALLLMRCRSAP 247
Query: 254 SIGWIERKPKQDEE---------DEEEEEKQ---SKISLKLLMEEEKEVTAKKESLVVMD 313
W E K ++ EE +EEEEEK +K L+ LMEEE KK +LVVM+
Sbjct: 248 VKNWSEEKKEETEEGDNRVKQSGEEEEEEKDRVGNKKDLRSLMEEE-----KKMNLVVMN 307
Query: 314 YDADFYRLSSDIAKETWVVSGSSKCSDDPLIRSRSWKR 326
YD ++Y+LS+DIAKETWVV G DPL RSRSWK+
Sbjct: 308 YDTNYYKLSNDIAKETWVVGG----IQDPLFRSRSWKK 314
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1HD24 | 2.2e-129 | 78.88 | uncharacterized protein LOC111462985 OS=Cucurbita moschata OX=3662 GN=LOC1114629... | [more] |
A0A5A7V8Z9 | 8.7e-118 | 74.05 | Myotubularin-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... | [more] |
A0A1S3BDB9 | 4.8e-116 | 74.26 | uncharacterized protein LOC103488403 OS=Cucumis melo OX=3656 GN=LOC103488403 PE=... | [more] |
A0A0A0LMI6 | 2.0e-114 | 71.51 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345900 PE=4 SV=1 | [more] |
A0A6J1KE65 | 1.9e-112 | 69.25 | uncharacterized protein LOC111492421 OS=Cucurbita maxima OX=3661 GN=LOC111492421... | [more] |
Match Name | E-value | Identity | Description | |
KAG6598680.1 | 1.7e-131 | 79.20 | hypothetical protein SDJN03_08458, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023546364.1 | 5.4e-130 | 78.38 | uncharacterized protein LOC111805493 [Cucurbita pepo subsp. pepo] | [more] |
XP_022962582.1 | 4.6e-129 | 78.88 | uncharacterized protein LOC111462985 [Cucurbita moschata] | [more] |
KAA0064832.1 | 1.8e-117 | 74.05 | myotubularin-related protein [Cucumis melo var. makuwa] | [more] |
XP_008445342.2 | 9.9e-116 | 74.26 | PREDICTED: uncharacterized protein LOC103488403 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
AT1G78110.1 | 7.9e-63 | 45.36 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT1G22230.1 | 1.0e-54 | 44.97 | unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... | [more] |