Lcy01g009560 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g009560
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Lon protease homolog, mitochondrial
Location	Chr01: 28100503 .. 28102836 (+)
RNA-Seq Expression	Lcy01g009560
Synteny	Lcy01g009560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGGTTGCGAACTCTTCATGCTTCCGGAGCCGTCTCCACAATCTGGCTCCGAATCTCCGCCCGGCGACGGAGCCGGAATCGCCTTTGGTTAGGGTTCTTGGGTCTCTTGGAGGGTTGGGCGGGAGAAGCACTAGGTTGAGTAGAAGGGTCGTTTTTTGCTCCGATGCCAGTGATGGGTCGCAACCGGTGGTTGAACTCGAGGCTAAGGCGGAGGAGGCCGGGGCGGAGGATGCTGAGTCAAAATCTTCATCTGCTATTATTCCGACGAACCCACGACCGGAGGATTATTTGACGGTTGGTATTGAGTTTTGATTTTTACTTGACGTGTGGATGAGGAAATGAAGGGAAATGGAGAAATAGTGTTCTTTCTTCCCTTCATTGTATTGAATTTTCTGTCTAACTGGAGTGGGAAAATTGGGGAGTTGGAAATTTTGCAATGTCAGGGATGTTGAATACTGTGAGGATTGAATTTGGTGTTCTATTTGGTTGTTAGATTGGCTGAAGGGTTATAGATAAAAACGGAAGAATACAAAAAGGATAAAACGCCATCATTATGACATATTTGAGCTCGGGAGGTTCAACTAGACTTAGATTAAATGTTATAGTAGTATTTTGGTGAAACCTGCCACTTCGCATAGTTTGCTAAAAAAGTTATATTCTCGAGTTAGCTCGGTTTGATTGTTAATTTTTATTTTCTCTTTGGAAAGGTTTTGGCGTTGTCATTGCCACATAGGCCATTGTTTCCTGGATTCTACATGCCGATCTATGTGAAGGTATGATAAGTACTTGGCATGATTGGAGTCATTGGGGACTATATTGCCTTGTCATTTAAGTTGAAGAGCTGTCATGTACTTTGATCTTTTAGTTCTGTTTGGTGGTGTTGGAATCATGCTGTTTATATTTGAATATTACCTCAATTATTATGCTGTAGTAGAAACCAACTTCTTAGAGGCATTGACTTGTTTATGGGAAGGGACTTGAGATGTGTGATATGTAGGATCCTAAACTAATGGCAGCTCTACAAGAAACCAGAAGAAGGCAAGCTCCATATGCTGATACCTTCCTTCTTAAGGATGAACCAGGAACCGGTCCTAGTTTAGTATTTGGAACCGAGTCAAAAAAAATATAAGTGATTTGAAAGGAAAAGAATTATATGATAGGCTTCATCAAGTTGGCACAGTTGCTCAGGCACTTGTGTTAATTTTTGCCCCTTTTTCTTTAGCAGCATGAAGCCCTTAGATTGTAGTTCATAATGAGTTGATTCTATGTGTTCTGTATTGTTATTTCAGATTTCAAGTATCCAAGGAGACCAGGTGGTGCTTATTGGTCACAGAAGACTCCGAATTACAGAGATGGTAATAGGAATAATTTAAGACAGCCATTCTGCCTTTTCTCTTCCCTGGCCATATGTTTTCTGACCCCTAAACAATACTTAGATTGTGCTGTAATATATATTTTCATAATGTTATTTCACGATTTTGAAGGATTTTTTAAACCATTTCTCCGATGTTTTGTTTAAAAAGAAAAAAAAAAAAGAGAATTAAAATCTAATATGATTTGAAATCTTTTTTTTTTTTTTTTTGACAATATGTGGAGGTGGAGAATTCGAACCACAAACCTTGTGGTTATCAGTACGATTTGAAATCCTTTTATCTCAAAAACTTTTTCGACTTCATTTCAATTTTACCCAATTTTGAGAATGATCGAATCAAGGAAGAAACGTGGAAAAAAAGGATTTAGTGTTTTTTTTTTAATTTAATTTTTTTATATATATTTTTCTGTTTTAGACTTTTAGTTCATTATTGTTGTTTTTATTAATAATATATAATAAAATATATAGGAAAACAAAGAGGACAGAAGGTAGTTTTTTTAAAAAATATTATTGTTGTTATTATTATTATACAAGAGATTTTGTTTTCACTTATTTGAAATTCATTAAAATCGTGTAACAATGAATTTTTTTAATAGTCTATTCTTCAAAAAATGAAATAATGAAATGGAAAATCAATTTCTTTGAGGAATAGATCTTTTTACTTAATTGTAATATAATGTAATTTGTTTCAGTATCTCTTTACTTAAGGAAAGTTTAATTTTTTTTTTTTCCCTTTTCTATTTTCTTTTGCTTCTCTATATATATATATATATATTTTTTTTTTCTAGACATAAATATTCTTATTTTCCTTATTTTTCTTTTCAATTTCAGCTCACCTTACAACTTACATCCAACAACTTTCAAATATCGCTTTACGAGTCATCTCCCTAGCACTTGTTGTAAGTAAGAACTCTACAATTAACACTTTAAGAAAATCGACACATCTGTCAACCTGA

mRNA sequence

ATGTTGAAGGTTGCGAACTCTTCATGCTTCCGGAGCCGTCTCCACAATCTGGCTCCGAATCTCCGCCCGGCGACGGAGCCGGAATCGCCTTTGGTTAGGGTTCTTGGGTCTCTTGGAGGGTTGGGCGGGAGAAGCACTAGGTTGAGTAGAAGGGTCGTTTTTTGCTCCGATGCCAGTGATGGGTCGCAACCGGTGGTTGAACTCGAGGCTAAGGCGGAGGAGGCCGGGGCGGAGGATGCTGAGTCAAAATCTTCATCTGCTATTATTCCGACGAACCCACGACCGGAGGATTATTTGACGGTTTTGGCGTTGTCATTGCCACATAGGCCATTGTTTCCTGGATTCTACATGCCGATCTATGTGAAGGATCCTAAACTAATGGCAGCTCTACAAGAAACCAGAAGAAGGCAAGCTCCATATGCTGATACCTTCCTTCTTAAGGATGAACCAGGAACCGATTTCAAGTATCCAAGGAGACCAGGTGGTGCTTATTGGTCACAGAAGACTCCGAATTACAGAGATGCTCACCTTACAACTTACATCCAACAACTTTCAAATATCGCTTTACGAGTCATCTCCCTAGCACTTGTTGTAAGTAAGAACTCTACAATTAACACTTTAAGAAAATCGACACATCTGTCAACCTGA

Coding sequence (CDS)

ATGTTGAAGGTTGCGAACTCTTCATGCTTCCGGAGCCGTCTCCACAATCTGGCTCCGAATCTCCGCCCGGCGACGGAGCCGGAATCGCCTTTGGTTAGGGTTCTTGGGTCTCTTGGAGGGTTGGGCGGGAGAAGCACTAGGTTGAGTAGAAGGGTCGTTTTTTGCTCCGATGCCAGTGATGGGTCGCAACCGGTGGTTGAACTCGAGGCTAAGGCGGAGGAGGCCGGGGCGGAGGATGCTGAGTCAAAATCTTCATCTGCTATTATTCCGACGAACCCACGACCGGAGGATTATTTGACGGTTTTGGCGTTGTCATTGCCACATAGGCCATTGTTTCCTGGATTCTACATGCCGATCTATGTGAAGGATCCTAAACTAATGGCAGCTCTACAAGAAACCAGAAGAAGGCAAGCTCCATATGCTGATACCTTCCTTCTTAAGGATGAACCAGGAACCGATTTCAAGTATCCAAGGAGACCAGGTGGTGCTTATTGGTCACAGAAGACTCCGAATTACAGAGATGCTCACCTTACAACTTACATCCAACAACTTTCAAATATCGCTTTACGAGTCATCTCCCTAGCACTTGTTGTAAGTAAGAACTCTACAATTAACACTTTAAGAAAATCGACACATCTGTCAACCTGA

Protein sequence

MLKVANSSCFRSRLHNLAPNLRPATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDASDGSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIYVKDPKLMAALQETRRRQAPYADTFLLKDEPGTDFKYPRRPGGAYWSQKTPNYRDAHLTTYIQQLSNIALRVISLALVVSKNSTINTLRKSTHLST

Homology

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BLAST of Lcy01g009560 vs. ExPASy Swiss-Prot
Match: P93655 (Lon protease homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LON1 PE=1 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 5.5e-41
Identity = 92/155 (59.35%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLR--PATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDA 60
           MLK+  SS   SR+H+L P  R   ++  ESPL + L  + G   RST L  R  FCS+ 
Sbjct: 1   MLKLFTSSA--SRVHHLTPVSRVVGSSPVESPLFKALSQITGWNRRSTSLGHRAFFCSEP 60

Query: 61  SDGSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMP 120
           ++G +   E E KA E+ +E ++SKSSSAI+PTNPRPED LTVLAL +PHRPLFPGFYMP
Sbjct: 61  TNG-EAAAEAETKAVESDSEVSDSKSSSAIVPTNPRPEDCLTVLALPVPHRPLFPGFYMP 120

Query: 121 IYVKDPKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           IYVKDPK++AALQE+RRRQAPYA  FLLKD+P  D
Sbjct: 121 IYVKDPKVLAALQESRRRQAPYAGAFLLKDDPSAD 152

[Close]

BLAST of Lcy01g009560 vs. ExPASy Swiss-Prot
Match: A2YQ56 (Lon protease homolog, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=OsI_27415 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.5e-33
Identity = 83/151 (54.97%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 5   ANSSCFRSRLHNLAPNLRPATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDASDGSQP 64
           A ++ F SR    AP +    E  SPL+RVLG+L   GGR + L RR  FCS+++     
Sbjct: 7   AAAAVFPSRF-AAAPAVAAVEEVRSPLLRVLGAL--RGGRVSTLGRRARFCSNSAGSDSE 66

Query: 65  VVELEAKAEEAGAE--DAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIYVK 124
               EAKAE+A A   +A+ K+SSAI+PT  RPED L+V+AL LPHRPLFPGFYMPIYVK
Sbjct: 67  AAAAEAKAEDAVAAEGEADGKASSAIVPTVLRPEDCLSVIALPLPHRPLFPGFYMPIYVK 126

Query: 125 DPKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           D KL+ AL E R+R  PYA  FL+KDE GTD
Sbjct: 127 DQKLLQALVENRKRSIPYAGAFLVKDEEGTD 154

[Close]

BLAST of Lcy01g009560 vs. ExPASy Swiss-Prot
Match: Q69UZ3 (Lon protease homolog, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0689300 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.5e-33
Identity = 83/151 (54.97%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 5   ANSSCFRSRLHNLAPNLRPATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDASDGSQP 64
           A ++ F SR    AP +    E  SPL+RVLG+L   GGR + L RR  FCS+++     
Sbjct: 7   AAAAVFPSRF-AAAPAVAAVEEVRSPLLRVLGAL--RGGRVSTLGRRARFCSNSAGSDSE 66

Query: 65  VVELEAKAEEAGAE--DAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIYVK 124
               EAKAE+A A   +A+ K+SSAI+PT  RPED L+V+AL LPHRPLFPGFYMPIYVK
Sbjct: 67  AAAAEAKAEDAVAAEGEADGKASSAIVPTVLRPEDCLSVIALPLPHRPLFPGFYMPIYVK 126

Query: 125 DPKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           D KL+ AL E R+R  PYA  FL+KDE GTD
Sbjct: 127 DQKLLQALVENRKRSIPYAGAFLVKDEEGTD 154

[Close]

BLAST of Lcy01g009560 vs. ExPASy Swiss-Prot
Match: P93648 (Lon protease homolog, mitochondrial OS=Zea mays OX=4577 GN=LON2 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.0e-31
Identity = 80/134 (59.70%), Postives = 96/134 (71.64%), Query Frame = 0


Query: 24  ATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSD--ASDGSQPVVELEAKAEEAGAE--D 83
           A E  SPL+RV+G+L   G  S  L RRV FCS+  ASD    V E EAKAE+A A   +
Sbjct: 9   AEELRSPLLRVIGTLRD-GRGSVLLGRRVRFCSNSSASDTEAAVAEAEAKAEDASAAEGE 68

Query: 84  AESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIYVKDPKLMAALQETRRRQAP 143
           A+SK+SSAI+PT+   +D L+V+AL LPHRPLFPGFYMPI VKD KL+ AL E R+R AP
Sbjct: 69  ADSKASSAIVPTSTNIDDCLSVIALPLPHRPLFPGFYMPINVKDQKLLQALIENRKRSAP 128

Query: 144 YADTFLLKDEPGTD 154
           YA  FL+KDE GTD
Sbjct: 129 YAGAFLVKDEEGTD 141

[Close]

BLAST of Lcy01g009560 vs. ExPASy Swiss-Prot
Match: Q9M9L7 (Lon protease homolog 4, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LON4 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.5e-22
Identity = 66/154 (42.86%), Postives = 88/154 (57.14%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLRPATEP-ESPLVRVLGSLGGLGGRSTRLSRRVVFCSDAS 60
           MLK    + + S  H++ P  R  + P ++ L + L  L G    S  L RR  F SD  
Sbjct: 1   MLKFLTPTAYAS--HHVTPATRFRSTPVKNLLFKQLTLLTGWNRSSYELGRR-SFSSDL- 60

Query: 61  DGSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPI 120
                              D+++KSS+  +   P  +D LTV+AL LPH+PL PGFYMPI
Sbjct: 61  -------------------DSDTKSSTTTVSAKPHLDDCLTVIALPLPHKPLIPGFYMPI 120

Query: 121 YVKDPKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           YVKDPK++AALQE+RR+QAPYA  FLLKD+  +D
Sbjct: 121 YVKDPKVLAALQESRRQQAPYAGAFLLKDDASSD 131

[Close]

BLAST of Lcy01g009560 vs. ExPASy TrEMBL
Match: A0A6J1FCI0 (Lon protease homolog, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111444355 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.9e-68
Identity = 134/153 (87.58%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLRPATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDASD 60
           MLKV NSSCFRSR HNLAP+LRPA E ESPLVRVLGSL GLGGR+TRLS R  FCSDASD
Sbjct: 1   MLKVVNSSCFRSRFHNLAPSLRPAAESESPLVRVLGSLRGLGGRNTRLSGRAFFCSDASD 60

Query: 61  GSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIY 120
           GSQPVVE++AK EEAGAEDAESKS+SAIIPTNPRPEDY+TVLAL LPHRPLFPGFYMPIY
Sbjct: 61  GSQPVVEIDAKVEEAGAEDAESKSTSAIIPTNPRPEDYMTVLALPLPHRPLFPGFYMPIY 120

Query: 121 VKDPKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           VKDPKL+AALQE+RRRQAPYA TFLLKDEPGTD
Sbjct: 121 VKDPKLLAALQESRRRQAPYAGTFLLKDEPGTD 153

[Close]

BLAST of Lcy01g009560 vs. ExPASy TrEMBL
Match: A0A6J1HP18 (Lon protease homolog, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111465425 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.2e-67
Identity = 133/153 (86.93%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLRPATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDASD 60
           MLKV NSSCFRSRLHNL+P+LRPA E ES LVRVLGSL GLGGR+TRLS R  FCSDASD
Sbjct: 1   MLKVVNSSCFRSRLHNLSPSLRPAAESESSLVRVLGSLRGLGGRNTRLSGRAFFCSDASD 60

Query: 61  GSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIY 120
           GSQPVVE++AK EEAGAEDAESKS+SAIIPTNPRPEDY+TVLAL LPHRPLFPGFYMPIY
Sbjct: 61  GSQPVVEIDAKVEEAGAEDAESKSTSAIIPTNPRPEDYMTVLALPLPHRPLFPGFYMPIY 120

Query: 121 VKDPKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           VKDPKL+AALQE+RRRQAPYA TFLLKDEPGTD
Sbjct: 121 VKDPKLLAALQESRRRQAPYAGTFLLKDEPGTD 153

[Close]

BLAST of Lcy01g009560 vs. ExPASy TrEMBL
Match: A0A6J1DT67 (Lon protease homolog, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111023269 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.6e-67
Identity = 136/188 (72.34%), Postives = 154/188 (81.91%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLRPATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDASD 60
           MLKV NSSCFRSRLHNLAP+LRPATE  SPL RVLGSL GLGGR+++L  R  FCSDASD
Sbjct: 1   MLKVVNSSCFRSRLHNLAPSLRPATESASPLARVLGSLRGLGGRNSKLCGRAFFCSDASD 60

Query: 61  GSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIY 120
           GS+ VVE+EAKAEEAGAEDAE+KSSSAI+PTNPRPEDYLTVLAL LPHRPLFPGFYMPIY
Sbjct: 61  GSEQVVEMEAKAEEAGAEDAEAKSSSAIVPTNPRPEDYLTVLALPLPHRPLFPGFYMPIY 120

Query: 121 VKDPKLMAALQETRRRQAPYADTFLLKDEPGTDFKYPRRPGGAYWSQKTPNYRDAHLTTY 180
           VKDPKL+AALQE+RRRQAPYA TFLLKDEPGTD   P    G+   +   + +   L   
Sbjct: 121 VKDPKLLAALQESRRRQAPYAGTFLLKDEPGTD---PSLVSGSETEKSISDLKGKELYDR 180

Query: 181 IQQLSNIA 189
           +Q++  +A
Sbjct: 181 LQEVGTLA 185

[Close]

BLAST of Lcy01g009560 vs. ExPASy TrEMBL
Match: A0A6J1DQ22 (Lon protease homolog, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111023269 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.6e-67
Identity = 136/188 (72.34%), Postives = 154/188 (81.91%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLRPATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDASD 60
           MLKV NSSCFRSRLHNLAP+LRPATE  SPL RVLGSL GLGGR+++L  R  FCSDASD
Sbjct: 1   MLKVVNSSCFRSRLHNLAPSLRPATESASPLARVLGSLRGLGGRNSKLCGRAFFCSDASD 60

Query: 61  GSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIY 120
           GS+ VVE+EAKAEEAGAEDAE+KSSSAI+PTNPRPEDYLTVLAL LPHRPLFPGFYMPIY
Sbjct: 61  GSEQVVEMEAKAEEAGAEDAEAKSSSAIVPTNPRPEDYLTVLALPLPHRPLFPGFYMPIY 120

Query: 121 VKDPKLMAALQETRRRQAPYADTFLLKDEPGTDFKYPRRPGGAYWSQKTPNYRDAHLTTY 180
           VKDPKL+AALQE+RRRQAPYA TFLLKDEPGTD   P    G+   +   + +   L   
Sbjct: 121 VKDPKLLAALQESRRRQAPYAGTFLLKDEPGTD---PSLVSGSETEKSISDLKGKELYDR 180

Query: 181 IQQLSNIA 189
           +Q++  +A
Sbjct: 181 LQEVGTLA 185

[Close]

BLAST of Lcy01g009560 vs. ExPASy TrEMBL
Match: A0A1S4E0F5 (lon protease homolog 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499387 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.9e-60
Identity = 123/153 (80.39%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLRPATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDASD 60
           MLK  NSSCFRSRLHNLAP+LRPATE ESPL+RVLGSL GLGGRSTRL+ R  FCSDA+D
Sbjct: 1   MLKAVNSSCFRSRLHNLAPSLRPATESESPLLRVLGSLRGLGGRSTRLTCRAFFCSDAND 60

Query: 61  GSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIY 120
            S  V E+EAK +E   ED E KSSSAI+PTNPRPEDYLTVLAL LPHRPLFPGFYMPIY
Sbjct: 61  ASSRVAEIEAKVKE---EDVEVKSSSAIVPTNPRPEDYLTVLALPLPHRPLFPGFYMPIY 120

Query: 121 VKDPKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           VKDPKL+AALQE+RRR APYA  FLLKDEPGTD
Sbjct: 121 VKDPKLLAALQESRRRHAPYAGAFLLKDEPGTD 150

[Close]

BLAST of Lcy01g009560 vs. NCBI nr
Match: XP_022938206.1 (lon protease homolog 1, mitochondrial [Cucurbita moschata] >KAG6586222.1 Lon protease-like, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268.9 bits (686), Expect = 3.9e-68
Identity = 134/153 (87.58%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLRPATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDASD 60
           MLKV NSSCFRSR HNLAP+LRPA E ESPLVRVLGSL GLGGR+TRLS R  FCSDASD
Sbjct: 1   MLKVVNSSCFRSRFHNLAPSLRPAAESESPLVRVLGSLRGLGGRNTRLSGRAFFCSDASD 60

Query: 61  GSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIY 120
           GSQPVVE++AK EEAGAEDAESKS+SAIIPTNPRPEDY+TVLAL LPHRPLFPGFYMPIY
Sbjct: 61  GSQPVVEIDAKVEEAGAEDAESKSTSAIIPTNPRPEDYMTVLALPLPHRPLFPGFYMPIY 120

Query: 121 VKDPKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           VKDPKL+AALQE+RRRQAPYA TFLLKDEPGTD
Sbjct: 121 VKDPKLLAALQESRRRQAPYAGTFLLKDEPGTD 153

[Close]

BLAST of Lcy01g009560 vs. NCBI nr
Match: KAG7021054.1 (Lon protease-like, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.9 bits (686), Expect = 3.9e-68
Identity = 134/153 (87.58%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLRPATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDASD 60
           MLKV NSSCFRSR HNLAP+LRPA E ESPLVRVLGSL GLGGR+TRLS R  FCSDASD
Sbjct: 1   MLKVVNSSCFRSRFHNLAPSLRPAAESESPLVRVLGSLRGLGGRNTRLSGRAFFCSDASD 60

Query: 61  GSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIY 120
           GSQPVVE++AK EEAGAEDAESKS+SAIIPTNPRPEDY+TVLAL LPHRPLFPGFYMPIY
Sbjct: 61  GSQPVVEIDAKVEEAGAEDAESKSTSAIIPTNPRPEDYMTVLALPLPHRPLFPGFYMPIY 120

Query: 121 VKDPKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           VKDPKL+AALQE+RRRQAPYA TFLLKDEPGTD
Sbjct: 121 VKDPKLLAALQESRRRQAPYAGTFLLKDEPGTD 153

[Close]

BLAST of Lcy01g009560 vs. NCBI nr
Match: XP_023537798.1 (lon protease homolog 1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.9 bits (681), Expect = 1.5e-67
Identity = 133/153 (86.93%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLRPATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDASD 60
           MLKV NSSCFRSR H+LAP+LRPA E ESPLVRVLGSL GLGGR+TRLS R  FCSDASD
Sbjct: 1   MLKVVNSSCFRSRFHSLAPSLRPAAESESPLVRVLGSLRGLGGRNTRLSGRAFFCSDASD 60

Query: 61  GSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIY 120
           GSQPVVE++AK EEAGAEDAESKS+SAIIPTNPRPEDY+TVLAL LPHRPLFPGFYMPIY
Sbjct: 61  GSQPVVEIDAKVEEAGAEDAESKSTSAIIPTNPRPEDYMTVLALPLPHRPLFPGFYMPIY 120

Query: 121 VKDPKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           VKDPKL+AALQE+RRRQAPYA TFLLKDEPGTD
Sbjct: 121 VKDPKLLAALQESRRRQAPYAGTFLLKDEPGTD 153

[Close]

BLAST of Lcy01g009560 vs. NCBI nr
Match: XP_022965560.1 (lon protease homolog 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 266.2 bits (679), Expect = 2.5e-67
Identity = 133/153 (86.93%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLRPATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDASD 60
           MLKV NSSCFRSRLHNL+P+LRPA E ES LVRVLGSL GLGGR+TRLS R  FCSDASD
Sbjct: 1   MLKVVNSSCFRSRLHNLSPSLRPAAESESSLVRVLGSLRGLGGRNTRLSGRAFFCSDASD 60

Query: 61  GSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIY 120
           GSQPVVE++AK EEAGAEDAESKS+SAIIPTNPRPEDY+TVLAL LPHRPLFPGFYMPIY
Sbjct: 61  GSQPVVEIDAKVEEAGAEDAESKSTSAIIPTNPRPEDYMTVLALPLPHRPLFPGFYMPIY 120

Query: 121 VKDPKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           VKDPKL+AALQE+RRRQAPYA TFLLKDEPGTD
Sbjct: 121 VKDPKLLAALQESRRRQAPYAGTFLLKDEPGTD 153

[Close]

BLAST of Lcy01g009560 vs. NCBI nr
Match: XP_022156355.1 (lon protease homolog 1, mitochondrial-like isoform X2 [Momordica charantia])

HSP 1 Score: 264.2 bits (674), Expect = 9.6e-67
Identity = 136/188 (72.34%), Postives = 154/188 (81.91%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLRPATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDASD 60
           MLKV NSSCFRSRLHNLAP+LRPATE  SPL RVLGSL GLGGR+++L  R  FCSDASD
Sbjct: 1   MLKVVNSSCFRSRLHNLAPSLRPATESASPLARVLGSLRGLGGRNSKLCGRAFFCSDASD 60

Query: 61  GSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIY 120
           GS+ VVE+EAKAEEAGAEDAE+KSSSAI+PTNPRPEDYLTVLAL LPHRPLFPGFYMPIY
Sbjct: 61  GSEQVVEMEAKAEEAGAEDAEAKSSSAIVPTNPRPEDYLTVLALPLPHRPLFPGFYMPIY 120

Query: 121 VKDPKLMAALQETRRRQAPYADTFLLKDEPGTDFKYPRRPGGAYWSQKTPNYRDAHLTTY 180
           VKDPKL+AALQE+RRRQAPYA TFLLKDEPGTD   P    G+   +   + +   L   
Sbjct: 121 VKDPKLLAALQESRRRQAPYAGTFLLKDEPGTD---PSLVSGSETEKSISDLKGKELYDR 180

Query: 181 IQQLSNIA 189
           +Q++  +A
Sbjct: 181 LQEVGTLA 185

[Close]

BLAST of Lcy01g009560 vs. TAIR 10
Match: AT5G26860.1 (lon protease 1 )

HSP 1 Score: 169.1 bits (427), Expect = 3.9e-42
Identity = 92/155 (59.35%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLR--PATEPESPLVRVLGSLGGLGGRSTRLSRRVVFCSDA 60
           MLK+  SS   SR+H+L P  R   ++  ESPL + L  + G   RST L  R  FCS+ 
Sbjct: 1   MLKLFTSSA--SRVHHLTPVSRVVGSSPVESPLFKALSQITGWNRRSTSLGHRAFFCSEP 60

Query: 61  SDGSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMP 120
           ++G +   E E KA E+ +E ++SKSSSAI+PTNPRPED LTVLAL +PHRPLFPGFYMP
Sbjct: 61  TNG-EAAAEAETKAVESDSEVSDSKSSSAIVPTNPRPEDCLTVLALPVPHRPLFPGFYMP 120

Query: 121 IYVKDPKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           IYVKDPK++AALQE+RRRQAPYA  FLLKD+P  D
Sbjct: 121 IYVKDPKVLAALQESRRRQAPYAGAFLLKDDPSAD 152

[Close]

BLAST of Lcy01g009560 vs. TAIR 10
Match: AT3G05790.1 (lon protease 4 )

HSP 1 Score: 105.5 bits (262), Expect = 5.3e-23
Identity = 66/154 (42.86%), Postives = 88/154 (57.14%), Query Frame = 0


Query: 1   MLKVANSSCFRSRLHNLAPNLRPATEP-ESPLVRVLGSLGGLGGRSTRLSRRVVFCSDAS 60
           MLK    + + S  H++ P  R  + P ++ L + L  L G    S  L RR  F SD  
Sbjct: 1   MLKFLTPTAYAS--HHVTPATRFRSTPVKNLLFKQLTLLTGWNRSSYELGRR-SFSSDL- 60

Query: 61  DGSQPVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPI 120
                              D+++KSS+  +   P  +D LTV+AL LPH+PL PGFYMPI
Sbjct: 61  -------------------DSDTKSSTTTVSAKPHLDDCLTVIALPLPHKPLIPGFYMPI 120

Query: 121 YVKDPKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           YVKDPK++AALQE+RR+QAPYA  FLLKD+  +D
Sbjct: 121 YVKDPKVLAALQESRRQQAPYAGAFLLKDDASSD 131

[Close]

BLAST of Lcy01g009560 vs. TAIR 10
Match: AT3G05780.1 (lon protease 3 )

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22
Identity = 66/150 (44.00%), Postives = 80/150 (53.33%), Query Frame = 0


Query: 6   NSSCFRSRLHNLAPNLRPATEPESPLV--RVLGSLGGLGGRSTRLSRRVVFCSDASDGSQ 65
           NS  F    H   P +R  + P   L+  R    L G    S  L  R V  SD SDG  
Sbjct: 33  NSRVFYGARHVTPPAIRIGSNPVQSLLLFRAPTQLTGWNRSSRDLLGRRVSFSDRSDG-- 92

Query: 66  PVVELEAKAEEAGAEDAESKSSSAIIPTNPRPEDYLTVLALSLPHRPLFPGFYMPIYVKD 125
                            +  SSS I+ TNP  +D LTV+AL LPH+PL PGFYMPI+VKD
Sbjct: 93  ----------------VDLLSSSPILSTNPNLDDSLTVIALPLPHKPLIPGFYMPIHVKD 152

Query: 126 PKLMAALQETRRRQAPYADTFLLKDEPGTD 154
           PK++AALQE+ R+Q+PY   FLLKD   TD
Sbjct: 153 PKVLAALQESTRQQSPYVGAFLLKDCASTD 164

The following BLAST results are available for this feature:

BLAST of Lcy01g009560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93655	5.5e-41	59.35	Lon protease homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LON1 PE...	[more]
A2YQ56	2.5e-33	54.97	Lon protease homolog, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Os...	[more]
Q69UZ3	2.5e-33	54.97	Lon protease homolog, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
P93648	4.0e-31	59.70	Lon protease homolog, mitochondrial OS=Zea mays OX=4577 GN=LON2 PE=1 SV=1	[more]
Q9M9L7	7.5e-22	42.86	Lon protease homolog 4, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Lcy01g009560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FCI0	1.9e-68	87.58	Lon protease homolog, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC11144435...	[more]
A0A6J1HP18	1.2e-67	86.93	Lon protease homolog, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111465425 ...	[more]
A0A6J1DT67	4.6e-67	72.34	Lon protease homolog, mitochondrial OS=Momordica charantia OX=3673 GN=LOC1110232...	[more]
A0A6J1DQ22	4.6e-67	72.34	Lon protease homolog, mitochondrial OS=Momordica charantia OX=3673 GN=LOC1110232...	[more]
A0A1S4E0F5	1.9e-60	80.39	lon protease homolog 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499387 PE...	[more]

BLAST of Lcy01g009560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938206.1	3.9e-68	87.58	lon protease homolog 1, mitochondrial [Cucurbita moschata] >KAG6586222.1 Lon pro...	[more]
KAG7021054.1	3.9e-68	87.58	Lon protease-like, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023537798.1	1.5e-67	86.93	lon protease homolog 1, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
XP_022965560.1	2.5e-67	86.93	lon protease homolog 1, mitochondrial [Cucurbita maxima]	[more]
XP_022156355.1	9.6e-67	72.34	lon protease homolog 1, mitochondrial-like isoform X2 [Momordica charantia]	[more]

BLAST of Lcy01g009560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26860.1	3.9e-42	59.35	lon protease 1	[more]
AT3G05790.1	5.3e-23	42.86	lon protease 4	[more]
AT3G05780.1	1.5e-22	44.00	lon protease 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003111	Lon, substrate-binding domain	PFAM	PF02190	LON_substr_bdg	coord: 101..148 e-value: 1.0E-7 score: 32.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..90
None	No IPR available	PANTHER	PTHR43718:SF8	LON PROTEASE HOMOLOG 1, MITOCHONDRIAL-RELATED	coord: 10..157
IPR027065	Lon protease	PANTHER	PTHR43718	LON PROTEASE	coord: 10..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g009560.1	Lcy01g009560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034599	cellular response to oxidative stress
biological_process	GO:0051131	chaperone-mediated protein complex assembly
biological_process	GO:0007005	mitochondrion organization
biological_process	GO:0070407	oxidation-dependent protein catabolic process
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0030163	protein catabolic process
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0003697	single-stranded DNA binding