Lcy01g008180 (gene) Sponge gourd (P93075) v1

Overview
NameLcy01g008180
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr01: 17235886 .. 17236949 (-)
RNA-Seq ExpressionLcy01g008180
SyntenyLcy01g008180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAGCCTTGTTTTTTGTAAGGCAAAGATCGAGGAGGCTTGGTTCTTTAAGAAAATCCTTGAAAGGTATGAGAAAGCTTCTGGTCAAGGAGGCTTGGTTCTTGAAGAAAATCCTTGAAAGGTATGAGAAAGCTACTGGTCAAATGGTTAATTATAACAAGTCTTCCATGTTTATTTTGCCGAATGTGTCTAATGAATTTAGCTCTGTTCTGGCTAATATTTTAAAAATACCTGTGGTGGATAGTTTGGGTGTGTATTTGGGTGTTCCATCCTCTTTCTCTCGTAAAAGATGTGATGATTTTAGATCTATCAAACAGATGCTCCAAGGTTGGAAAGGTAATCTCTTTTCCATAGGCGGCAAAGAGGTGCTTATTAAGAGTGTAGCACAAGTTATACCTACGTATTTGATGAGTTGCTTTAGATTGCCACAATCAGTGTGTCATGAGATTCACAGGATGATGGCTAGATTTTGGTGGGGGACTATAAAATCAAGAAAGAAGTTGCACTGGAAGAAATGGGAGTTTATGTGTCTTCCAAAGGAGCTGGGTGGTTTGAATTTCAGAGACTTGAGCTCCTTTAATCGTTCCCTTTTAGCTATGCAGGTGTGGCGTTTGTTTAAACATCCCAATTATTAGCCTCTCGTGTTATATCTGGGCGATATGCATCCCAAACATCTTTGCTAACGACACCATCTAAATCTAATAGTTCCTTCTTTTGGAAAGGTTTTGTCTAGGCTCGGGAATTGATTCTTCGGGGTATTCGAAAGAGGGTTGGGAATGGTACTTCTATTCGATTCTATGAAGATCCTTGGCTTTCAAAGGAAATTAATTTCAAGCCCATGAGACTTCATAATGCGGGGGTGCAAGATGCGGTAATGGTAGCGGATGTTATAACACCATCGAATGGGTGGGATATGGAAAAAATAGGAGATATGGTGCCATATGAGGATGCACAGTTGATCCAATCAATACCAATCGGTGGTCCAAATGAGGAGGATATTTGGATATGGCATTATTCTCGTAATGGAGATTATACAACAAAGAGTGGATACAGCTCGAAATGA

mRNA sequence

ATGATAGCCTTGTTTTTTGTAAGGCAAAGATCGAGGAGGCTTGGTTCTTTAAGAAAATCCTTGAAAGGTATGAGAAAGCTTCTGGTCAAGGAGGCTTGGTTCTTGAAGAAAATCCTTGAAAGGTATGAGAAAGCTACTGGTCAAATGGTTAATTATAACAAGTCTTCCATGTTTATTTTGCCGAATGTGTCTAATGAATTTAGCTCTGTTCTGGCTAATATTTTAAAAATACCTGTGGTGGATAGTTTGGGTGTGTATTTGGGTGTTCCATCCTCTTTCTCTCGTAAAAGATGTGATGATTTTAGATCTATCAAACAGATGCTCCAAGGTTGGAAAGGTAATCTCTTTTCCATAGGCGGCAAAGAGGTGCTTATTAAGAGTGTAGCACAAGTTATACCTACGTATTTGATGAGTTGCTTTAGATTGCCACAATCAGTGTGTCATGAGATTCACAGGATGATGGCTAGATTTTGGTGGGGGACTATAAAATCAAGAAAGAAGTTGCACTGGAAGAAATGGGAGTTTATGTGTCTTCCAAAGGAGCTGGGTGGTTTGAATTTCAGAGACTTGAGCTCCTTTAATCGTTCCCTTTTAGCTATGCAGGCTCGGGAATTGATTCTTCGGGGTATTCGAAAGAGGGTTGGGAATGGTACTTCTATTCGATTCTATGAAGATCCTTGGCTTTCAAAGGAAATTAATTTCAAGCCCATGAGACTTCATAATGCGGGGGTGCAAGATGCGGTAATGGTAGCGGATGTTATAACACCATCGAATGGGTGGGATATGGAAAAAATAGGAGATATGGTGCCATATGAGGATGCACAGTTGATCCAATCAATACCAATCGGTGGTCCAAATGAGGAGGATATTTGGATATGGCATTATTCTCGTAATGGAGATTATACAACAAAGAGTGGATACAGCTCGAAATGA

Coding sequence (CDS)

ATGATAGCCTTGTTTTTTGTAAGGCAAAGATCGAGGAGGCTTGGTTCTTTAAGAAAATCCTTGAAAGGTATGAGAAAGCTTCTGGTCAAGGAGGCTTGGTTCTTGAAGAAAATCCTTGAAAGGTATGAGAAAGCTACTGGTCAAATGGTTAATTATAACAAGTCTTCCATGTTTATTTTGCCGAATGTGTCTAATGAATTTAGCTCTGTTCTGGCTAATATTTTAAAAATACCTGTGGTGGATAGTTTGGGTGTGTATTTGGGTGTTCCATCCTCTTTCTCTCGTAAAAGATGTGATGATTTTAGATCTATCAAACAGATGCTCCAAGGTTGGAAAGGTAATCTCTTTTCCATAGGCGGCAAAGAGGTGCTTATTAAGAGTGTAGCACAAGTTATACCTACGTATTTGATGAGTTGCTTTAGATTGCCACAATCAGTGTGTCATGAGATTCACAGGATGATGGCTAGATTTTGGTGGGGGACTATAAAATCAAGAAAGAAGTTGCACTGGAAGAAATGGGAGTTTATGTGTCTTCCAAAGGAGCTGGGTGGTTTGAATTTCAGAGACTTGAGCTCCTTTAATCGTTCCCTTTTAGCTATGCAGGCTCGGGAATTGATTCTTCGGGGTATTCGAAAGAGGGTTGGGAATGGTACTTCTATTCGATTCTATGAAGATCCTTGGCTTTCAAAGGAAATTAATTTCAAGCCCATGAGACTTCATAATGCGGGGGTGCAAGATGCGGTAATGGTAGCGGATGTTATAACACCATCGAATGGGTGGGATATGGAAAAAATAGGAGATATGGTGCCATATGAGGATGCACAGTTGATCCAATCAATACCAATCGGTGGTCCAAATGAGGAGGATATTTGGATATGGCATTATTCTCGTAATGGAGATTATACAACAAAGAGTGGATACAGCTCGAAATGA

Protein sequence

MIALFFVRQRSRRLGSLRKSLKGMRKLLVKEAWFLKKILERYEKATGQMVNYNKSSMFILPNVSNEFSSVLANILKIPVVDSLGVYLGVPSSFSRKRCDDFRSIKQMLQGWKGNLFSIGGKEVLIKSVAQVIPTYLMSCFRLPQSVCHEIHRMMARFWWGTIKSRKKLHWKKWEFMCLPKELGGLNFRDLSSFNRSLLAMQARELILRGIRKRVGNGTSIRFYEDPWLSKEINFKPMRLHNAGVQDAVMVADVITPSNGWDMEKIGDMVPYEDAQLIQSIPIGGPNEEDIWIWHYSRNGDYTTKSGYSSK
Homology
BLAST of Lcy01g008180 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.7e-14
Identity = 43/151 (28.48%), Postives = 68/151 (45.03%), Query Frame = 0

Query: 132 IPTYLMSCFRLPQSVCHEIHRMMARFWWGTIKSRKKLHWKKWEFMCLPKE-LGGLNFRDL 191
           +P Y MSCFRL + +C ++   M  FWW + ++++K+ W  W+ +C  KE  GGL FRDL
Sbjct: 3   LPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDL 62

Query: 192 SSFNRSLLAMQA--------------------------------------------RELI 238
             FN++LLA Q+                                            REL+
Sbjct: 63  GWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELL 122

BLAST of Lcy01g008180 vs. ExPASy TrEMBL
Match: A0A803PM68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 5.7e-58
Identity = 125/323 (38.70%), Postives = 174/323 (53.87%), Query Frame = 0

Query: 33  WFLKKILERYEKATGQMVNYNKSSMFILPNVSNEFSSVLANILKIPVVDSLGVYLGVPSS 92
           WF +++LE+Y  A+GQ+VN++KS M     VS+   S LA ++ + VVD+ G YLG+PS 
Sbjct: 38  WF-QELLEKYSIASGQVVNFHKSEMCFGRTVSDPLKSQLAALMGVKVVDNYGKYLGLPSF 97

Query: 93  FSRKRCDDFRSIK----QMLQGWKGNLFSIGGKEVLIKSVAQVIPTYLMSCFRLPQSVCH 152
             R +   F  IK      L+GWKG+ FS  GKE+LIK++ Q IPTY MSCFRLP+   +
Sbjct: 98  VGRTKKQHFEFIKTKVWNKLKGWKGSFFSAAGKEILIKAIVQAIPTYTMSCFRLPKKTIN 157

Query: 153 EIHRMMARFWWGTIKSRKKLHWKKWEFMCLPKELGGLNFRDLSSFNRSLLAMQ------- 212
            IH M ARFWWG+ +   K+HW KW  +C  KE GGL FRDL  FN++LLA Q       
Sbjct: 158 SIHSMAARFWWGSSEKDAKIHWCKWSTLCKHKEQGGLGFRDLGLFNQALLAKQIWRCIRY 217

Query: 213 -------------------------------------ARELILRGIRKRVGNGTSIRFYE 272
                                                 +++I +G R R+GNG S+R  E
Sbjct: 218 PNSLCSKVLKASYFPNVGVLEAKSGNHASFVWRSLVWGKKIIQKGYRWRIGNGNSVRVLE 277

Query: 273 DPWLSKEINFKPMRLHNAGVQDAVMVADVITPSNGWDMEKIGDMVPYEDAQLIQSIPIGG 308
           DPWL + + FK        + + + V D++  +  WD E I       DA+LI  +P   
Sbjct: 278 DPWLPRPVTFKV--YDKPSLPEGMYVVDLMKGNGEWDEEFIRAFFNPTDAELILGMPTSE 337

BLAST of Lcy01g008180 vs. ExPASy TrEMBL
Match: A0A803Q1K6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 7.4e-58
Identity = 124/320 (38.75%), Postives = 172/320 (53.75%), Query Frame = 0

Query: 36   KKILERYEKATGQMVNYNKSSMFILPNVSNEFSSVLANILKIPVVDSLGVYLGVPSSFSR 95
            +++L +Y  A+GQ+VNY+KS      NV+ E  S+LA IL +  V++ G YLG+PS   R
Sbjct: 1002 QQLLSKYTAASGQLVNYHKSEACFGRNVTAEVRSLLAGILGVREVENHGKYLGLPSFVGR 1061

Query: 96   KRCDDFRSIKQ----MLQGWKGNLFSIGGKEVLIKSVAQVIPTYLMSCFRLPQSVCHEIH 155
             + +    IK      ++GWK ++FS+ GKEVLIK++ Q IPTY MSCF+LP+     +H
Sbjct: 1062 NKREFLDEIKNKVWAKMKGWKTSMFSVAGKEVLIKAIVQAIPTYTMSCFKLPKKTISSLH 1121

Query: 156  RMMARFWWGTIKSRKKLHWKKWEFMCLPKELGGLNFRDLSSFNRSLLAMQ---------- 215
            RM +RFWWG+    KK+HW KW ++C PK+ GGL FRDL  FN++LLA Q          
Sbjct: 1122 RMASRFWWGSSDKEKKIHWCKWRYLCRPKDKGGLGFRDLGMFNQALLAKQIWRCLRHPQL 1181

Query: 216  ----------------------------------ARELILRGIRKRVGNGTSIRFYEDPW 275
                                               ++LIL+G R RVGNG S+R  EDPW
Sbjct: 1182 LCSRVLKASYFPRKGVLEAGCGANASFVSRSLVWGKKLILKGYRWRVGNGESVRVLEDPW 1241

Query: 276  LSKEINFKPMRLHNAGVQDAVMVADVITPSNGWDMEKIGDMVPYEDAQLIQSIPIGGPNE 308
            L + + FK        +   + V D+      WD   I  +    DA LI  IP    + 
Sbjct: 1242 LPRPVTFKV--YDQPSLPANLYVTDLKMADGQWDEGSIRSIFNPTDADLILGIPCSDWDF 1301

BLAST of Lcy01g008180 vs. ExPASy TrEMBL
Match: A0A803Q154 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 7.4e-58
Identity = 126/324 (38.89%), Postives = 174/324 (53.70%), Query Frame = 0

Query: 36  KKILERYEKATGQMVNYNKSSMFILPNVSNEFSSVLANILKIPVVDSLGVYLGVPSSFSR 95
           K +L++Y  A+GQ VN+ KS M     V     S LA +L + VV++ G YLG+PS F R
Sbjct: 168 KDLLDKYTMASGQAVNFTKSEMCFGALVDRSLRSRLAALLDVKVVNNYGKYLGLPSFFGR 227

Query: 96  KRCDDFRSIK----QMLQGWKGNLFSIGGKEVLIKSVAQVIPTYLMSCFRLPQSVCHEIH 155
            + + F  IK    Q ++GWKG++FS+ GKEVLIK++ Q +P Y MSCF+LP+S    +H
Sbjct: 228 SKKELFEVIKNRVWQKVRGWKGSMFSVAGKEVLIKAILQAMPAYTMSCFQLPKSTIKSLH 287

Query: 156 RMMARFWWGTIKSRKKLHWKKWEFMCLPKELGGLNFRDLSSFNRSLLAMQ---------- 215
            M ARFWWG+   +KK+HW KW +MC PKE GGL FRDL  FN++LLA Q          
Sbjct: 288 SMGARFWWGSSARQKKVHWCKWNYMCKPKEKGGLGFRDLGLFNQALLAKQVWRCLRSPTL 347

Query: 216 ----------------------------------ARELILRGIRKRVGNGTSIRFYEDPW 275
                                              ++L+L+G R R+G+G  +R   DPW
Sbjct: 348 LSSRVLKACYYPGVSVLDAKCGSHSSFMWRSMMWGKKLLLKGYRWRIGDGNGVRVLNDPW 407

Query: 276 LSKEINF----KPMRLHNAGVQDAVMVADVITPSNGWDMEKIGDMVPYEDAQLIQSIPIG 308
           L + + F    +P   H       + V D+     GWD   I      EDA+LI ++P G
Sbjct: 408 LPRPVTFCVYDRPEFPHE------LYVVDLKLADGGWDEGFIKAHFNEEDAELILNLPSG 467

BLAST of Lcy01g008180 vs. ExPASy TrEMBL
Match: A0A803QA44 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 9.7e-58
Identity = 122/282 (43.26%), Postives = 166/282 (58.87%), Query Frame = 0

Query: 30  KEAWFLKKILERYEKATGQMVNYNKSSMFILPNVSNEFSSVLANILKIPVVDSLGVYLGV 89
           KE    K +L+ Y KA GQMVN++KS M     V       LA+I+ + VV++ G YLG+
Sbjct: 41  KECEGFKTLLDNYAKAYGQMVNFHKSEMCFGKRVPGGVRDRLASIMGVRVVENYGKYLGL 100

Query: 90  PSSFSRKRCDDFRSIK----QMLQGWKGNLFSIGGKEVLIKSVAQVIPTYLMSCFRLPQS 149
           PS   R + + F  I+      ++GWK +LFS+ GKEVLIK+  Q I TY MS F LP+S
Sbjct: 101 PSFVGRTKKEVFAGIRNKVWNKVRGWKASLFSVAGKEVLIKATLQAILTYTMSYFLLPKS 160

Query: 150 VCHEIHRMMARFWWGTIKSRKKLHWKKWEFMCLPKELGGLNFRDLSSFNRSLLAMQAREL 209
           + + +HRM ARFWWG+ +   K+HW KW ++C PKE GGL FRDL  FN++LLA Q    
Sbjct: 161 MINSLHRMAARFWWGSSEKNNKIHWSKWSYLCKPKEKGGLGFRDLGLFNKALLAKQVWRK 220

Query: 210 ILRGIRKRVGNGTSIRFYEDPWLSKEINFKPMRLHNAGVQDAVMVADVITPSNGWDMEKI 269
           I+ G R R+GNG S+R  EDP L   ++FK        V   + V D+      WD   I
Sbjct: 221 IM-GYRWRIGNGNSVRVLEDPCLPHPVSFK--IFDPPPVPSPLYVTDLKNADGSWDAMFI 280

Query: 270 GDMVPYEDAQLIQSIPIGGPNEEDIWIWHYSRNGDYTTKSGY 308
             +   EDA+LI  IP    + ED  +WHY +NG+Y+  +GY
Sbjct: 281 NAVFNREDAELILGIPSTDCDLEDKIMWHYRKNGEYSVSNGY 319

BLAST of Lcy01g008180 vs. ExPASy TrEMBL
Match: A0A803Q0L5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 1.7e-57
Identity = 127/320 (39.69%), Postives = 173/320 (54.06%), Query Frame = 0

Query: 36  KKILERYEKATGQMVNYNKSSMFILPNVSNEFSSVLANILKIPVVDSLGVYLGVPSSFSR 95
           K +LE Y  A+GQ+VNY+KS +    NVS E    LA  + +  VD+ G YLG+PS   R
Sbjct: 281 KSLLELYSAASGQLVNYHKSEVCFGRNVSREVRQQLALFMGVRQVDNHGKYLGLPSFVGR 340

Query: 96  KRCDDFRSIKQ----MLQGWKGNLFSIGGKEVLIKSVAQVIPTYLMSCFRLPQSVCHEIH 155
            + +    IK      ++GWK ++FS+ GKEVLIK+V Q IPTY MSCFRL +     IH
Sbjct: 341 NKKEFLDQIKNKVWAKMKGWKSSMFSMAGKEVLIKAVVQAIPTYAMSCFRLSKKTISSIH 400

Query: 156 RMMARFWWGTIKSRKKLHWKKWEFMCLPKELGGLNFRDLSSFNRSLLAMQ---------- 215
           RM ARFWWG+ +  KK+HW KW  +C PK+ GGL FRDL  FN+++LA Q          
Sbjct: 401 RMAARFWWGSSEKDKKIHWCKWAHLCKPKDKGGLGFRDLGFFNQAILAKQVWRCIRCLNN 460

Query: 216 ----------------------------------ARELILRGIRKRVGNGTSIRFYEDPW 275
                                              +++I+ G R RVGNG ++R  EDPW
Sbjct: 461 LCSRVLKASYFPHKTILEAKSGACASFVWRSLIWGKKVIVNGYRWRVGNGENVRVLEDPW 520

Query: 276 LSKEINFKPMRLHNAGVQDAVMVADVITPSNGWDMEKIGDMVPYEDAQLIQSIPIGGPNE 308
           L + + FK        +   ++VAD+      WD   I ++   +DA+LI S+P  G   
Sbjct: 521 LPRPVTFK--IYDKPPLPANMVVADMKHGDGSWDSIFIQEVFNSDDAELILSMPSTGWEL 580

BLAST of Lcy01g008180 vs. NCBI nr
Match: XP_017250619.1 (PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus])

HSP 1 Score: 223.0 bits (567), Expect = 3.5e-54
Identity = 111/321 (34.58%), Postives = 172/321 (53.58%), Query Frame = 0

Query: 35   LKKILERYEKATGQMVNYNKSSMFILPNVSNEFSSVLANILKIPVVDSLGVYLGVPSSFS 94
            ++ I   Y + +GQM+N+NKS +F  PN +N+  S     L +   +++  YLG+P    
Sbjct: 914  IQNIFSLYSECSGQMINFNKSLLFFSPNTTNDVRSTFMVSLNMQTTEAIETYLGLPMLGG 973

Query: 95   RKRCDDFRSIKQ----MLQGWKGNLFSIGGKEVLIKSVAQVIPTYLMSCFRLPQSVCHEI 154
            + +   FRSIK+     L  W+ ++FS GGKE+L+K+V Q +PTY MSCF++P+  C EI
Sbjct: 974  KNKKILFRSIKEKVWARLHSWRPDVFSQGGKEILLKAVIQAMPTYFMSCFKIPEGQCQEI 1033

Query: 155  HRMMARFWWGTIKSRKKLHWKKWEFMCLPKELGGLNFRDLSSFNRSLLAMQA-------- 214
             +++AR+WWG++ S++K+HW+ W  +  PK  GGL FR    +N++LLA QA        
Sbjct: 1034 EKLLARYWWGSVHSKRKIHWRAWTKISTPKSEGGLGFRTFIHYNQALLAKQAWRILIYPT 1093

Query: 215  ------------------------------------RELILRGIRKRVGNGTSIRFYEDP 274
                                                + L++ G+R+R+GNG S R ++DP
Sbjct: 1094 SLLSQVLQAKYFASSSFLDSKEGRCPSLTWRSIVWGKTLLIEGLRRRIGNGQSTRAFKDP 1153

Query: 275  WLSKEINFKPMRLHNAGVQDAVMVADVITPSNGWDMEKIGDMVPYEDAQLIQSIPIGGPN 308
            WL++  +F P+     G ++ V V + IT    W+ E I       D QLI  IP+   +
Sbjct: 1154 WLARPPSFLPI---TRGSEEEVKVVEYIT-GGTWNRELIRQTFLSPDIQLILEIPLSRFD 1213

BLAST of Lcy01g008180 vs. NCBI nr
Match: PRQ55763.1 (putative RNA-directed DNA polymerase [Rosa chinensis])

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-52
Identity = 112/321 (34.89%), Postives = 168/321 (52.34%), Query Frame = 0

Query: 35  LKKILERYEKATGQMVNYNKSSMFILPNVSNEFSSVLANILKIPVVDSLGVYLGVPSSFS 94
           LK++ E+YEKA+GQM+N++KS +    NV       LA  L++  VD    YLG+P+  S
Sbjct: 550 LKRMFEQYEKASGQMINFDKSCVSFSKNVKRAKQDELAASLRVLRVDKHDKYLGLPTEIS 609

Query: 95  RKRCDDF----RSIKQMLQGWKGNLFSIGGKEVLIKSVAQVIPTYLMSCFRLPQSVCHEI 154
             + + F      +++  QGW+    S  GKE++IK+VAQ IPTY+MSCF LP+ +C E+
Sbjct: 610 YSKSEAFNFLSEKVRKRTQGWRAKTLSAAGKEIMIKAVAQSIPTYVMSCFELPKHLCLEM 669

Query: 155 HRMMARFWWGTIKSRKKLHWKKWEFMCLPKELGGLNFRDLSSFNRSLLAMQ--------- 214
           HR+MA+FWWG   + KK+HW  WE +C+PK  GGL FR++  FN++LLA Q         
Sbjct: 670 HRLMAQFWWGDKSNDKKIHWLAWEKLCVPKAEGGLGFRNMVQFNQALLAKQGWRIIQNPN 729

Query: 215 -----------------------------------ARELILRGIRKRVGNGTSIRFYEDP 274
                                               REL+ +G+R +VGNG+ I  + D 
Sbjct: 730 SLLARLYKAKYFPNCDFMKAEASSGSSYAWKSILFGRELLRKGLRLQVGNGSQIAVWTDQ 789

Query: 275 WLSKEINFKPMRLHNAGVQDAVMVADVITPSNGWDMEKIGDMVPYEDAQLIQSIPIGGPN 308
           WL    +F+P+     G++   +   +    N W M  + ++    +  LI SIP+    
Sbjct: 790 WLPLPHSFRPISTPKEGLETLRVDELIDQEENEWHMFLLQELFMPLEVNLIASIPLSLRR 849

BLAST of Lcy01g008180 vs. NCBI nr
Match: XP_024172304.2 (uncharacterized protein LOC112178381 [Rosa chinensis])

HSP 1 Score: 217.2 bits (552), Expect = 1.9e-52
Identity = 114/322 (35.40%), Postives = 174/322 (54.04%), Query Frame = 0

Query: 35   LKKILERYEKATGQMVNYNKSSMFILPNVSNEFSSVLANILKIPVVDSLGVYLGVPSSFS 94
            +K+IL+ YE A+GQ VN+ KS +    NV       LA +  +  VD    YLG+P+  S
Sbjct: 716  VKEILKWYEDASGQQVNFQKSKISFSKNVDIGCQEELAEVFGVERVDKHDKYLGLPTEVS 775

Query: 95   RKRCDDFRSI----KQMLQGWKGNLFSIGGKEVLIKSVAQVIPTYLMSCFRLPQSVCHEI 154
              + + F+ I    +  ++ WK    S+ GKEV+IKSV Q +PTY+MSCF LP+ +C E+
Sbjct: 776  YSKTEAFQFIMEKTRNKMKNWKDKTLSVAGKEVMIKSVVQSVPTYVMSCFELPKHLCQEM 835

Query: 155  HRMMARFWWGTIKSRKKLHWKKWEFMCLPKELGGLNFRDLSSFNRSLLA----------- 214
            HR MA FWWG  +  +K+HW  W+ MC+PKE GGL FR++  FN++LLA           
Sbjct: 836  HRCMAEFWWGDSEKGRKIHWLAWDKMCVPKEKGGLGFRNMEYFNQALLAKQGWRILRHPD 895

Query: 215  ---------------------------------MQARELILRGIRKRVGNGTSIRFYEDP 274
                                             M+ + L+ +G+R +VG+GT I  + DP
Sbjct: 896  SLLGKTLKAKYFPNNDFIHASVNQGDSYTWRSLMKGKVLLEKGLRFQVGSGTRISVWFDP 955

Query: 275  WLSKEINFKPMRLHNAGVQDAVMVADVITP-SNGWDMEKIGDMVPYEDAQLIQSIPIGGP 308
            W+ +  +F+P      G++D + VAD+I P S  W ++ + ++   ++  LI+ IP+   
Sbjct: 956  WIPRPYSFRPYSTVMEGLED-LTVADLIDPDSKDWMVDWLEELFFADEVDLIRKIPLSLR 1015

BLAST of Lcy01g008180 vs. NCBI nr
Match: XP_024156142.1 (uncharacterized protein LOC112164137 [Rosa chinensis])

HSP 1 Score: 216.5 bits (550), Expect = 3.3e-52
Identity = 115/322 (35.71%), Postives = 173/322 (53.73%), Query Frame = 0

Query: 35  LKKILERYEKATGQMVNYNKSSMFILPNVSNEFSSVLANILKIPVVDSLGVYLGVPSSFS 94
           +K+IL+ YE A+GQ VN+ KS +    NV       LA +  +  VD    YLG+P+  S
Sbjct: 508 VKEILKWYEDASGQQVNFQKSKISFSKNVDIGCQEELAEVFGVERVDKHDKYLGLPTKVS 567

Query: 95  RKRCDDFRSI----KQMLQGWKGNLFSIGGKEVLIKSVAQVIPTYLMSCFRLPQSVCHEI 154
             + + F+ I    K  ++ WK    S+ GKEV+IKSV Q +PTY+MSCF LP+ +C E+
Sbjct: 568 YSKIEAFQFIMEKTKNKMKNWKDKTLSVAGKEVMIKSVVQSVPTYVMSCFELPKHLCQEM 627

Query: 155 HRMMARFWWGTIKSRKKLHWKKWEFMCLPKELGGLNFRDLSSFNRSLLA----------- 214
           HR MA FWWG  +  +K+HW  W+ MC+PKE GGL FR++  FN++LLA           
Sbjct: 628 HRCMAEFWWGDSEKGRKIHWLAWDKMCVPKEEGGLGFRNMEYFNQALLAKQGWRILRHPD 687

Query: 215 ---------------------------------MQARELILRGIRKRVGNGTSIRFYEDP 274
                                            M+ + L+ +G+R +VG GT I  + DP
Sbjct: 688 SLLGKTLKAKYFPNNDFIHASVNQGDSYTWRSLMKGKVLLEKGLRFQVGLGTRISVWFDP 747

Query: 275 WLSKEINFKPMRLHNAGVQDAVMVADVITP-SNGWDMEKIGDMVPYEDAQLIQSIPIGGP 308
           W+ +  +F+P      G++D + VAD+I P S  W ++ + ++   ++  LI+ IP+   
Sbjct: 748 WIPRPYSFRPYSTVMEGLED-LTVADLIDPDSKDWMVDWLEELFFADEVDLIRKIPLSLR 807

BLAST of Lcy01g008180 vs. NCBI nr
Match: XP_030479133.1 (uncharacterized protein LOC115696372 [Cannabis sativa])

HSP 1 Score: 216.5 bits (550), Expect = 3.3e-52
Identity = 117/322 (36.34%), Postives = 162/322 (50.31%), Query Frame = 0

Query: 35  LKKILERYEKATGQMVNYNKSSMFILPNVSNEFSSVLANILKIPVVDSLGVYLGVPSSFS 94
           +K+ L+ Y +A+GQ +N +KS M   PN      +    IL +P+ +    YLG+P+   
Sbjct: 663 IKRALDIYHRASGQRLNADKSVMSFSPNTPIAVQNSFQQILGMPICECHEAYLGLPAYSE 722

Query: 95  RKRCDDFRSIKQ----MLQGWKGNLFSIGGKEVLIKSVAQVIPTYLMSCFRLPQSVCHEI 154
           R +   F +IK+    ++  W   +FSIGGKEVL+K+V Q IPTY MSCFRLP  +C+EI
Sbjct: 723 RDKSQLFSNIKEKIWKLMHAWNDKIFSIGGKEVLLKAVVQSIPTYAMSCFRLPVKLCNEI 782

Query: 155 HRMMARFWWGTIKSRKKLHWKKWEFMCLPKELGGLNFRDLSSFNRSLLAMQA-------- 214
             MMA+FWWG+    KK+HWKKW F+C  K  GG+ FR    FN++LLA QA        
Sbjct: 783 EAMMAKFWWGSSSDNKKIHWKKWRFLCKSKGDGGMGFRSFVHFNQALLAKQAWRIFQDPT 842

Query: 215 ------------------------------------RELILRGIRKRVGNGTSIRFYEDP 274
                                               REL+++G+R +VG G +IR   D 
Sbjct: 843 SLLSRVLKGHYFSQNDFMTARGGGLSSLTWQGIVWGRELLVKGLRLKVGTGNNIRCAVDS 902

Query: 275 WLSKEINFKPMRLHNAGVQDAVMVADVITPSNGWDMEKIGDMVPYEDAQLIQSIPIGGPN 309
           W+     FKP     A       VAD IT +  W++E +       D   I  IP+    
Sbjct: 903 WIPGHKGFKPYCYTGAHTNH---VADYITATREWNIECLQSDFSTPDVDNILKIPLSFLP 962

BLAST of Lcy01g008180 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-24
Identity = 65/227 (28.63%), Postives = 101/227 (44.49%), Query Frame = 0

Query: 132 IPTYLMSCFRLPQSVCHEIHRMMARFWWGTIKSRKKLHWKKWEFMCLPKELGGLNFRDLS 191
           +PTY M+CF LP++VC +I  ++A FWW   +  K +HWK W+ +   K  GG+ F+D+ 
Sbjct: 3   LPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIE 62

Query: 192 SFNRSLLAMQ--------------------------------------------ARELIL 251
           +FN +LL  Q                                            ++E++ 
Sbjct: 63  AFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILR 122

Query: 252 RGIRKRVGNGTSIRFYEDPWLSKEINFKPMRLHN------AGVQDAVMVADVITPS-NGW 308
           +G R  VGNG  I  +   WL  +     +R+        A V   + V+D+I  S   W
Sbjct: 123 QGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREW 182

BLAST of Lcy01g008180 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-15
Identity = 43/151 (28.48%), Postives = 68/151 (45.03%), Query Frame = 0

Query: 132 IPTYLMSCFRLPQSVCHEIHRMMARFWWGTIKSRKKLHWKKWEFMCLPKE-LGGLNFRDL 191
           +P Y MSCFRL + +C ++   M  FWW + ++++K+ W  W+ +C  KE  GGL FRDL
Sbjct: 3   LPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDL 62

Query: 192 SSFNRSLLAMQA--------------------------------------------RELI 238
             FN++LLA Q+                                            REL+
Sbjct: 63  GWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELL 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P932953.7e-1428.48Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A803PM685.7e-5838.70Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803Q1K67.4e-5838.75Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803Q1547.4e-5838.89Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QA449.7e-5843.26Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803Q0L51.7e-5739.69Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_017250619.13.5e-5434.58PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus][more]
PRQ55763.11.5e-5234.89putative RNA-directed DNA polymerase [Rosa chinensis][more]
XP_024172304.21.9e-5235.40uncharacterized protein LOC112178381 [Rosa chinensis][more]
XP_024156142.13.3e-5235.71uncharacterized protein LOC112164137 [Rosa chinensis][more]
XP_030479133.13.3e-5236.34uncharacterized protein LOC115696372 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
AT4G29090.11.1e-2428.63Ribonuclease H-like superfamily protein [more]
ATMG00310.12.6e-1528.48RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 29..298
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 29..298

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy01g008180.1Lcy01g008180.1mRNA