Lcy01g006710 (gene) Sponge gourd (P93075) v1

Overview
NameLcy01g006710
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUreide permease-like protein
LocationChr01: 10491153 .. 10492789 (-)
RNA-Seq ExpressionLcy01g006710
SyntenyLcy01g006710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGTCAGTATTATCTTGAAGCTATTTTCCTATTGAATTTTCATATAGTGAATATGGTATGTTGTGCTATCTAGGACTATCTATCCCTTACATCTAGAATGATCTTTTGGTTCCTTCTTTGCAGAAAATTTTAGCATGGGAAATAGTTGATGGTTTGGTCAATTTAAAGTTTAATGAATGTGAGGTATGTTTGCTGTTCTATAACCATTGTTATGAGAGTGGACAAATTTTCATACCAAACTCCATTTGTATGAATGTGAGGTACACCAAAAGAAAAGCAAATATTTCTCATTGATTGCCATGTTGACAATAGTGCTGAATACTTATGGATGCAAAGAAAGTACCTATCAACTGAGTTTTCCAGCCCAGTAATTACAGCTTAATTAACTCAATAAAGACCTAACGAACTCTTAGTTCTGGTTGAAAAATTTGAGTTGTGATATAATTTTTTTCTGCTTTTTATAGGCAAAGAATAATAGTCCTGTTGCACAAGGAAAATGCATTTCACTGTCTATTGCTGTATCATTTTGGTTTAAATCTACCGTTATGATTGTTTCTTATCCTGTCTTCAAGTGTTATTTTTCAAATTTCTCTTCAATCAATAATTGAAATATGTTCTATTCCTATTAGTTGTGGCGAAAGAACTGTGTATTTATCACTTTGACTATAAACATAATGGTGGTCTAGTTTCTCATGGTTAAAGGGTTCAATAATGCTTAAGTTCTAGACTTTGGAAATTGTAAATGGAAACAATTTCAATAGTGGTTTGGATGTTAATGCTTGGAGGATTGAGGTCTAACATGAAGGTGCAGCGCGAAGAAGTAACTTTTATAATAAATTGCATGATTCAAATCAGAAAGAGAATGAAAATTAGGTGTATGATACTTTTAATTCCCTTGAAGTTATTACCTATGCTACCCTTGACTTTATTTGATGCTATCTTAGTTTATATTTCTTTTGGTATTTGTTTCCTTTTTTTGAAACTGTTAATATTTGATAGCTTGAGTAATGATCTGAAGTTTTTTTCTTGAAAATTGGTACTGTATAAATATTGGTGTGTTATCTTCTTCTTCTTCTTCTCTAATCCTTCTTTGTTATTTATTTTTCTCTTTGTTGCCACTGTTTGGGGTGAATCAATTTTAGTTGTTATTTGGTTTTGTTTGAATTATCGAATTATTCTGATCAATACAGACATCTAAGAAGAGTGGTTGTGGAATTCGTAGATATGATTCTAATTCATTTACCTTACTCAAAGATTATTGCTCTGTTTCCATATGCAGGATAATTGGTTTTCTGTCATGTTTGCAATGGCGGGTGATATAGTACCGAGTCTTGGACATCTTTCTACCCAGTATGCTTTTGCTTTGGTTGGTCTATCAGTTACAGTAGTGATCAATGCAAGTATAACGGTTGTTAATGTTATAGGTCTGTATCTTTACTTCTATTTCTTACTCTATTTGTCTTTGTATGTCTTTCAGGTGAAAAGAAACTCTATATATGTCTAAAATCTGATGGGATACCCCATCTGGGGTACTGTTTTTCTTTTGCTAAAAGGTACAACCGTGAAACTACTTTCTTGATGACAAAATTAATAGAGTCGAGGCACTTTTCCCTGGTGTTGATTGCTTTCTGA

mRNA sequence

ATGAAAATTTTAGCATGGGAAATAGTTGATGGTTTGGTCAATTTAAAGTTTAATGAATGTGAGGATAATTGGTTTTCTGTCATGTTTGCAATGGCGGGTGATATAGTACCGAGTCTTGGACATCTTTCTACCCAGTATGCTTTTGCTTTGGTTGGTCTATCAGTTACAGTAGTGATCAATGCAAGTATAACGGTTGTTAATGTTATAGGTGAAAAGAAACTCTATATATGTCTAAAATCTGATGGGATACCCCATCTGGGGTACTGTTTTTCTTTTGCTAAAAGGTACAACCGTGAAACTACTTTCTTGATGACAAAATTAATAGAGTCGAGGCACTTTTCCCTGGTGTTGATTGCTTTCTGA

Coding sequence (CDS)

ATGAAAATTTTAGCATGGGAAATAGTTGATGGTTTGGTCAATTTAAAGTTTAATGAATGTGAGGATAATTGGTTTTCTGTCATGTTTGCAATGGCGGGTGATATAGTACCGAGTCTTGGACATCTTTCTACCCAGTATGCTTTTGCTTTGGTTGGTCTATCAGTTACAGTAGTGATCAATGCAAGTATAACGGTTGTTAATGTTATAGGTGAAAAGAAACTCTATATATGTCTAAAATCTGATGGGATACCCCATCTGGGGTACTGTTTTTCTTTTGCTAAAAGGTACAACCGTGAAACTACTTTCTTGATGACAAAATTAATAGAGTCGAGGCACTTTTCCCTGGTGTTGATTGCTTTCTGA

Protein sequence

MKILAWEIVDGLVNLKFNECEDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVVNVIGEKKLYICLKSDGIPHLGYCFSFAKRYNRETTFLMTKLIESRHFSLVLIAF
Homology
BLAST of Lcy01g006710 vs. ExPASy Swiss-Prot
Match: Q9ZQ89 (Ureide permease 2 OS=Arabidopsis thaliana OX=3702 GN=UPS2 PE=1 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 7.4e-11
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG IV SLG+LSTQYA+ALVGLSVT VI +SITVV
Sbjct: 79  QDNWPSVMFAMAGGIVLSLGNLSTQYAWALVGLSVTEVITSSITVV 124

BLAST of Lcy01g006710 vs. ExPASy Swiss-Prot
Match: Q9ZPR7 (Ureide permease 1 OS=Arabidopsis thaliana OX=3702 GN=UPS1 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-10
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG IV SLG+L+TQYA+A VGLSVT VI ASITVV
Sbjct: 76  QDNWQSVMFAMAGGIVLSLGNLATQYAWAYVGLSVTEVITASITVV 121

BLAST of Lcy01g006710 vs. ExPASy Swiss-Prot
Match: Q41706 (Probable ureide permease A3 (Fragment) OS=Vigna unguiculata OX=3917 GN=A3 PE=2 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 6.3e-10
Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SV+FAM G +V SLG+LS+QYAFA VGLSVT VI ASITVV
Sbjct: 78  QDNWPSVLFAMGGGVVLSLGNLSSQYAFAFVGLSVTEVITASITVV 123

BLAST of Lcy01g006710 vs. ExPASy Swiss-Prot
Match: Q9ZPR6 (Ureide permease 3 OS=Arabidopsis thaliana OX=3702 GN=UPS3 PE=2 SV=3)

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-09
Identity = 37/60 (61.67%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 7   EIVDGLVNLKFNECEDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 66
           EI     N      +DNW SVMFAMAG I  SLG L+TQYA+A VGLSVT VI ASI VV
Sbjct: 62  EISPSRPNFTTQLSQDNWPSVMFAMAGGIFLSLGTLATQYAWAFVGLSVTEVITASIAVV 121

BLAST of Lcy01g006710 vs. ExPASy Swiss-Prot
Match: Q9ZQ88 (Ureide permease 4 OS=Arabidopsis thaliana OX=3702 GN=UPS4 PE=2 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 9.0e-09
Identity = 31/46 (67.39%), Postives = 39/46 (84.78%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SV+ A+AG ++ S+G+L+TQYAFA VGLSVT VI ASITVV
Sbjct: 79  QDNWPSVLLAVAGGVLLSIGNLATQYAFAFVGLSVTEVITASITVV 124

BLAST of Lcy01g006710 vs. ExPASy TrEMBL
Match: A0A1S3BFW3 (ureide permease 1-like OS=Cucumis melo OX=3656 GN=LOC103489183 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.9e-09
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG IV SLG+LSTQYAFALVGLSVT VI ASITVV
Sbjct: 79  QDNWSSVMFAMAGGIVLSLGNLSTQYAFALVGLSVTEVITASITVV 124

BLAST of Lcy01g006710 vs. ExPASy TrEMBL
Match: A0A5D3CBZ1 (Ureide permease 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00110 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.9e-09
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG IV SLG+LSTQYAFALVGLSVT VI ASITVV
Sbjct: 79  QDNWSSVMFAMAGGIVLSLGNLSTQYAFALVGLSVTEVITASITVV 124

BLAST of Lcy01g006710 vs. ExPASy TrEMBL
Match: G7JZ34 (Ureide permease-like protein OS=Medicago truncatula OX=3880 GN=11425933 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.2e-09
Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG +V SLG+LSTQYAFALVGLSVT VI ASITVV
Sbjct: 79  QDNWPSVMFAMAGGVVLSLGNLSTQYAFALVGLSVTEVITASITVV 124

BLAST of Lcy01g006710 vs. ExPASy TrEMBL
Match: A0A072UFK6 (Putative ureide permease OS=Medicago truncatula OX=3880 GN=11425933 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.2e-09
Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG +V SLG+LSTQYAFALVGLSVT VI ASITVV
Sbjct: 105 QDNWPSVMFAMAGGVVLSLGNLSTQYAFALVGLSVTEVITASITVV 150

BLAST of Lcy01g006710 vs. ExPASy TrEMBL
Match: A0A3Q7YD31 (LOW QUALITY PROTEIN: ureide permease 2-like OS=Cicer arietinum OX=3827 GN=LOC101513655 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.2e-09
Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG +V SLG+LSTQYAFALVGLSVT VI ASITVV
Sbjct: 105 QDNWPSVMFAMAGGVVLSLGNLSTQYAFALVGLSVTEVITASITVV 150

BLAST of Lcy01g006710 vs. NCBI nr
Match: KAA0034472.1 (ureide permease 1-like [Cucumis melo var. makuwa] >TYK09025.1 ureide permease 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 3.9e-09
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG IV SLG+LSTQYAFALVGLSVT VI ASITVV
Sbjct: 79  QDNWSSVMFAMAGGIVLSLGNLSTQYAFALVGLSVTEVITASITVV 124

BLAST of Lcy01g006710 vs. NCBI nr
Match: XP_008446435.1 (PREDICTED: ureide permease 1-like [Cucumis melo] >XP_008446436.1 PREDICTED: ureide permease 1-like [Cucumis melo] >XP_008446438.1 PREDICTED: ureide permease 1-like [Cucumis melo])

HSP 1 Score: 72.0 bits (175), Expect = 3.9e-09
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG IV SLG+LSTQYAFALVGLSVT VI ASITVV
Sbjct: 79  QDNWSSVMFAMAGGIVLSLGNLSTQYAFALVGLSVTEVITASITVV 124

BLAST of Lcy01g006710 vs. NCBI nr
Match: KAG5603552.1 (hypothetical protein H5410_025044 [Solanum commersonii])

HSP 1 Score: 71.6 bits (174), Expect = 5.1e-09
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0

Query: 14  NLKFNECEDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           N     C DNW SV+FAMAG +V SLG+LSTQYAFA VGLSVT V++ASITVV
Sbjct: 88  NSLLQRCRDNWPSVLFAMAGGMVLSLGNLSTQYAFAFVGLSVTEVVSASITVV 140

BLAST of Lcy01g006710 vs. NCBI nr
Match: XP_027187955.1 (LOW QUALITY PROTEIN: ureide permease 2-like [Cicer arietinum])

HSP 1 Score: 70.9 bits (172), Expect = 8.7e-09
Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG +V SLG+LSTQYAFALVGLSVT VI ASITVV
Sbjct: 105 QDNWPSVMFAMAGGVVLSLGNLSTQYAFALVGLSVTEVITASITVV 150

BLAST of Lcy01g006710 vs. NCBI nr
Match: XP_013453837.1 (ureide permease 2 isoform X1 [Medicago truncatula] >KEH27868.1 ureide permease-like protein [Medicago truncatula] >RHN55597.1 putative ureide permease [Medicago truncatula])

HSP 1 Score: 70.9 bits (172), Expect = 8.7e-09
Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG +V SLG+LSTQYAFALVGLSVT VI ASITVV
Sbjct: 105 QDNWPSVMFAMAGGVVLSLGNLSTQYAFALVGLSVTEVITASITVV 150

BLAST of Lcy01g006710 vs. TAIR 10
Match: AT2G03530.1 (ureide permease 2 )

HSP 1 Score: 68.2 bits (165), Expect = 5.2e-12
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG IV SLG+LSTQYA+ALVGLSVT VI +SITVV
Sbjct: 79  QDNWPSVMFAMAGGIVLSLGNLSTQYAWALVGLSVTEVITSSITVV 124

BLAST of Lcy01g006710 vs. TAIR 10
Match: AT2G03530.2 (ureide permease 2 )

HSP 1 Score: 68.2 bits (165), Expect = 5.2e-12
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG IV SLG+LSTQYA+ALVGLSVT VI +SITVV
Sbjct: 79  QDNWPSVMFAMAGGIVLSLGNLSTQYAWALVGLSVTEVITSSITVV 124

BLAST of Lcy01g006710 vs. TAIR 10
Match: AT2G03590.1 (ureide permease 1 )

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0

Query: 21  EDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 67
           +DNW SVMFAMAG IV SLG+L+TQYA+A VGLSVT VI ASITVV
Sbjct: 76  QDNWQSVMFAMAGGIVLSLGNLATQYAWAYVGLSVTEVITASITVV 121

BLAST of Lcy01g006710 vs. TAIR 10
Match: AT2G03600.1 (ureide permease 3 )

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-10
Identity = 37/60 (61.67%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 7   EIVDGLVNLKFNECEDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 66
           EI     N      +DNW SVMFAMAG I  SLG L+TQYA+A VGLSVT VI ASI VV
Sbjct: 62  EISPSRPNFTTQLSQDNWPSVMFAMAGGIFLSLGTLATQYAWAFVGLSVTEVITASIAVV 121

BLAST of Lcy01g006710 vs. TAIR 10
Match: AT2G03600.5 (ureide permease 3 )

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-10
Identity = 37/60 (61.67%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 7   EIVDGLVNLKFNECEDNWFSVMFAMAGDIVPSLGHLSTQYAFALVGLSVTVVINASITVV 66
           EI     N      +DNW SVMFAMAG I  SLG L+TQYA+A VGLSVT VI ASI VV
Sbjct: 62  EISPSRPNFTTQLSQDNWPSVMFAMAGGIFLSLGTLATQYAWAFVGLSVTEVITASIAVV 121

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9ZQ897.4e-1180.43Ureide permease 2 OS=Arabidopsis thaliana OX=3702 GN=UPS2 PE=1 SV=2[more]
Q9ZPR72.1e-1078.26Ureide permease 1 OS=Arabidopsis thaliana OX=3702 GN=UPS1 PE=1 SV=1[more]
Q417066.3e-1073.91Probable ureide permease A3 (Fragment) OS=Vigna unguiculata OX=3917 GN=A3 PE=2 S... [more]
Q9ZPR63.1e-0961.67Ureide permease 3 OS=Arabidopsis thaliana OX=3702 GN=UPS3 PE=2 SV=3[more]
Q9ZQ889.0e-0967.39Ureide permease 4 OS=Arabidopsis thaliana OX=3702 GN=UPS4 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
A0A1S3BFW31.9e-0984.78ureide permease 1-like OS=Cucumis melo OX=3656 GN=LOC103489183 PE=3 SV=1[more]
A0A5D3CBZ11.9e-0984.78Ureide permease 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4... [more]
G7JZ344.2e-0982.61Ureide permease-like protein OS=Medicago truncatula OX=3880 GN=11425933 PE=3 SV=... [more]
A0A072UFK64.2e-0982.61Putative ureide permease OS=Medicago truncatula OX=3880 GN=11425933 PE=3 SV=1[more]
A0A3Q7YD314.2e-0982.61LOW QUALITY PROTEIN: ureide permease 2-like OS=Cicer arietinum OX=3827 GN=LOC101... [more]
Match NameE-valueIdentityDescription
KAA0034472.13.9e-0984.78ureide permease 1-like [Cucumis melo var. makuwa] >TYK09025.1 ureide permease 1-... [more]
XP_008446435.13.9e-0984.78PREDICTED: ureide permease 1-like [Cucumis melo] >XP_008446436.1 PREDICTED: urei... [more]
KAG5603552.15.1e-0969.81hypothetical protein H5410_025044 [Solanum commersonii][more]
XP_027187955.18.7e-0982.61LOW QUALITY PROTEIN: ureide permease 2-like [Cicer arietinum][more]
XP_013453837.18.7e-0982.61ureide permease 2 isoform X1 [Medicago truncatula] >KEH27868.1 ureide permease-l... [more]
Match NameE-valueIdentityDescription
AT2G03530.15.2e-1280.43ureide permease 2 [more]
AT2G03530.25.2e-1280.43ureide permease 2 [more]
AT2G03590.11.5e-1178.26ureide permease 1 [more]
AT2G03600.12.2e-1061.67ureide permease 3 [more]
AT2G03600.52.2e-1061.67ureide permease 3 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009834Ureide permeasePFAMPF07168Ureide_permeasecoord: 21..66
e-value: 8.8E-17
score: 60.9
NoneNo IPR availablePANTHERPTHR31081:SF19BNAC09G21970D PROTEINcoord: 20..70
IPR030189Ureide permease, plantPANTHERPTHR31081UREIDE PERMEASE 1-RELATED-RELATEDcoord: 20..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy01g006710.1Lcy01g006710.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015720 allantoin transport
biological_process GO:1903791 uracil transmembrane transport
biological_process GO:0071705 nitrogen compound transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005274 allantoin:proton symporter activity
molecular_function GO:0015505 uracil:cation symporter activity
molecular_function GO:0022857 transmembrane transporter activity