Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTAGGGTTTTGAATGTCTGAAAATTTGGGGGAAATCTCTTAATTTTGGGACATTTGGATCTTGAAAGCCCAGCCCATCATGGAGTGAAATAGAAGCCCAATTACTCTAAGGTTGCCAGTCCCATTAACCCAATGGCTCAATAAGAGAAAAACAAAAAAGATTCTATATATATATATATATTTTTTTGAGTACATCAACATTCAGGGGTGGGGGGATTCGAACCTTTGACCTCATGGTCGAGGGTACATGCCAATTACGAGCTAAGCTCACTTTGGCCAAAAAAGATTCTATATTTTTCAATATTAACTTTGCCAACATGAGTTTAATTCAACTAGCATAAAGTTGTACTGATGACCAAGAGATTTGTGGTTTTGATTGTTTGCATGACATCGTGGCAACGATGAAGCTCGATATAGATAGAGCATGTGATCGTGTTGAATGGATTTATTTACATCGAGTTATTTGGAGTCAATCCGTTTATTTATTTCTTATTTTATTTGTATACTTTTGAATGAAAAGCCACAACAAGAATTTGCTCTGTTATGTAGACTTCATTAGGGAGATCTCATTTCCATTTTCCCCTATCTTTTTCTAATTTGTGCTAAAGGGTTGTATGCACTTTTATACATGGAAGAAGAACTACTTAAATTTTCTGGATTAAAGATTAATAATATTGCGTAGTTGTGAACCATCTTTTCAAGGCACATGTTCTTCAAAGAAACGCTTAAGGATAGTCAAATGATTAAGCAAACTCTCTCTACTTGTGAAAAGGCGTTTCGAGAAATGATCAATTATGCCAAGTTAATGTTTATGGTTAGCAAGAATACATATCCAAACATGATGGAGATTAATAAAAGGAAATTACATATGGGATAAGAAAAACGACATTTTTACGGTGAAGAACGCCTATCACTTGGCTACCAACCTAGCCCAAGCGGAGGTTCCTTCAAGCTCGGACGATTCCCATGCCAAATCCCTATGGAAGTCCATCTGGAATCTCAATTGCCTCCCTAGAGCTAAAATCATGGTTTGGAAAGTGGTTAAGGATATTCTTCCTACCCAATTGAATATTATCAAAATAGAGGCGTAAATACTAACTCTCTGTGTCTTCTTTACAGGACAAAAAGGGAGTCGACAGGGCATATTTTCTGGTCTTGTAAGGTGGCTAGGAAGGTTTGGGTTTTTTTCTTCCCGGTCTTAAAAAGTTTTCTTAATTCTGTTAGGGATTGCTGGACTCCCCCAGACTATTGGCAAAGGCTTGCTAGCATTCTCAACATCAGAGATCAAAACAAAGCGGCCATTATCATCTGGTGCCTCTGGTTCGAAAGAAATTCAAGCAAGCATAGTGGGAAGATGGCAGATATAGAGAAAATAATCCTATCCATCAGTAAATATTTAGAAGAGTTTGAAAGGAAAGTAGTACCTGCTCGCTCGTCGGATCGATCAGAGAATCAAGCGAGTCATGGCAGTTGGTCCCCGCCGGCATCTGGTTCCTTTAAATTGAACGCCGATGCCTCCTGGTGTGATCGCTCAAATTCAGGAGGGGTGGGGTGCATTCTCCGTGACTCGAATGGTTCTCTCATCTTGGCGGGCTGCAAGCAGATTCCCTATCGATGGGATATTAAAACCCTCGAATCTTATGCCATTCATGAAGGGTTAGAGTCTTACGTGAAGGCTCTGGAAGAACTAGATCTCAGACAAAAGCCCCCCCTTGAGGTTGAGTTGGACTCCAGTGCGGCGATTAAAGCGATCACCCGTGCAGAAGAAGATCAATCGGAGCTCTCATTGTTCGTTGAGGGAGTCACTGATCTGATCCCAGCAGCAAACGCCGTCCGGTTTTCTAAATGCTCGAGAGCAGCGAATGTAGGCGCACACAATTTGGTGCGAGCAAGTCTTCAAGTTGGGGATTTTAGTTTTTTTGGGCGTTTCTTGTCCCCTAATTTCGTTCATTCTTTTTTGGAAAGGGAGGTCCGTCTCCCTAACTGGTTTTCTTCTATTTTAGAAGAAATTGATTGTAGTTTGGTTCCTTCTCTCTAA
mRNA sequence
ATGAGTTTAGGGGATTGCTGGACTCCCCCAGACTATTGGCAAAGGCTTGCTAGCATTCTCAACATCAGAGATCAAAACAAAGCGGCCATTATCATCTGGTGCCTCTGGTTCGAAAGAAATTCAAGCAAGCATAGTGGGAAGATGGCAGATATAGAGAAAATAATCCTATCCATCAGTAAATATTTAGAAGAGTTTGAAAGGAAAGTAGTACCTGCTCGCTCGTCGGATCGATCAGAGAATCAAGCGAGTCATGGCAGTTGGTCCCCGCCGGCATCTGGTTCCTTTAAATTGAACGCCGATGCCTCCTGGTGTGATCGCTCAAATTCAGGAGGGGTGGGGTGCATTCTCCGTGACTCGAATGGTTCTCTCATCTTGGCGGGCTGCAAGCAGATTCCCTATCGATGGGATATTAAAACCCTCGAATCTTATGCCATTCATGAAGGGTTAGAGTCTTACGTGAAGGCTCTGGAAGAACTAGATCTCAGACAAAAGCCCCCCCTTGAGGTTGAGTTGGACTCCAGTGCGGCGATTAAAGCGATCACCCGTGCAGAAGAAGATCAATCGGAGCTCTCATTGTTCGTTGAGGGAGTCACTGATCTGATCCCAGCAGCAAACGCCGTCCGGTTTTCTAAATGCTCGAGAGCAGCGAATGTAGGCGCACACAATTTGGTGCGAGCAAGTCTTCAAGTTGGGGATTTTAGTTTTTTTGGGCGTTTCTTGTCCCCTAATTTCGTTCATTCTTTTTTGGAAAGGGAGGTCCGTCTCCCTAACTGGTTTTCTTCTATTTTAGAAGAAATTGATTGTAGTTTGGTTCCTTCTCTCTAA
Coding sequence (CDS)
ATGAGTTTAGGGGATTGCTGGACTCCCCCAGACTATTGGCAAAGGCTTGCTAGCATTCTCAACATCAGAGATCAAAACAAAGCGGCCATTATCATCTGGTGCCTCTGGTTCGAAAGAAATTCAAGCAAGCATAGTGGGAAGATGGCAGATATAGAGAAAATAATCCTATCCATCAGTAAATATTTAGAAGAGTTTGAAAGGAAAGTAGTACCTGCTCGCTCGTCGGATCGATCAGAGAATCAAGCGAGTCATGGCAGTTGGTCCCCGCCGGCATCTGGTTCCTTTAAATTGAACGCCGATGCCTCCTGGTGTGATCGCTCAAATTCAGGAGGGGTGGGGTGCATTCTCCGTGACTCGAATGGTTCTCTCATCTTGGCGGGCTGCAAGCAGATTCCCTATCGATGGGATATTAAAACCCTCGAATCTTATGCCATTCATGAAGGGTTAGAGTCTTACGTGAAGGCTCTGGAAGAACTAGATCTCAGACAAAAGCCCCCCCTTGAGGTTGAGTTGGACTCCAGTGCGGCGATTAAAGCGATCACCCGTGCAGAAGAAGATCAATCGGAGCTCTCATTGTTCGTTGAGGGAGTCACTGATCTGATCCCAGCAGCAAACGCCGTCCGGTTTTCTAAATGCTCGAGAGCAGCGAATGTAGGCGCACACAATTTGGTGCGAGCAAGTCTTCAAGTTGGGGATTTTAGTTTTTTTGGGCGTTTCTTGTCCCCTAATTTCGTTCATTCTTTTTTGGAAAGGGAGGTCCGTCTCCCTAACTGGTTTTCTTCTATTTTAGAAGAAATTGATTGTAGTTTGGTTCCTTCTCTCTAA
Protein sequence
MSLGDCWTPPDYWQRLASILNIRDQNKAAIIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQASHGSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPYRWDIKTLESYAIHEGLESYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSELSLFVEGVTDLIPAANAVRFSKCSRAANVGAHNLVRASLQVGDFSFFGRFLSPNFVHSFLEREVRLPNWFSSILEEIDCSLVPSL
Homology
BLAST of Lcy01g003700 vs. ExPASy TrEMBL
Match:
A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 3.3e-17
Identity = 68/220 (30.91%), Postives = 108/220 (49.09%), Query Frame = 0
Query: 24 DQNKAAIIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQAS 83
++ ++ II W +W RN S G ++ I L I +Y+ + +S N+
Sbjct: 8 ERRRSMIIAWQIWEMRNKSIFKGVHSETRDIQLVIDRYIINSAGR--DTNLKGKSANKDL 67
Query: 84 H----------GSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPY 143
H W PP S S+KLN DA+W +N+GG+G ILRD G +I A C+ I
Sbjct: 68 HLIRRIGDNTGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRT 127
Query: 144 RWDIKTLESYAIHEGL----ESYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSE 203
+I LE AI EGL + + + +++ R P+ +E DS AI + R +DQ+E
Sbjct: 128 ERNITYLEVMAICEGLRAIRQEHCRPIQQEHCR---PIHLESDSLEAIHLLHRQCQDQTE 187
Query: 204 LSLFVEGVTDLIPAANAVRFSKCSRAANVGAHNLVRASLQ 230
+ +E + ++ V SR AN AH+L R +++
Sbjct: 188 IIWLLEEIWQMMEDMKIVSMRHISREANKVAHDLARRAME 222
BLAST of Lcy01g003700 vs. ExPASy TrEMBL
Match:
A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)
HSP 1 Score: 98.2 bits (243), Expect = 5.6e-17
Identity = 68/216 (31.48%), Postives = 106/216 (49.07%), Query Frame = 0
Query: 24 DQNKAAIIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQAS 83
++ ++ II W +W RN S G + I L+I +Y+ + + +S N+
Sbjct: 8 ERRRSMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIINSAGRNTNLKG--KSTNKDL 67
Query: 84 H----------GSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPY 143
H W PP S S+KLN +A+W +N+GG+G ILRD G +I A C+ I
Sbjct: 68 HLIRRIEDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRA 127
Query: 144 RWDIKTLESYAIHEGLESYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSELSLF 203
+I LE AI EGL +A+ + R P+ +E DS AI + R +DQ+E+
Sbjct: 128 ERNITYLEVMAICEGL----RAIRQEHCR---PIHLESDSLEAIHLLHRQCQDQTEIIWL 187
Query: 204 VEGVTDLIPAANAVRFSKCSRAANVGAHNLVRASLQ 230
+E + ++ V SR AN AH L R +++
Sbjct: 188 LEEIWQMMKDMEIVSMRHISREANKVAHGLARRAME 214
BLAST of Lcy01g003700 vs. ExPASy TrEMBL
Match:
A0A5P1EPS3 (RNase H domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F5270 PE=4 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 2.6e-14
Identity = 66/224 (29.46%), Postives = 105/224 (46.88%), Query Frame = 0
Query: 8 TPPDYWQRLASILNIRDQNKA--AIIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEF 67
T P++ ++L + QN A A+ W +W RN + + K + LE++
Sbjct: 25 TAPNFKDWFNAMLQNQQQNLALIAMTCWAIWNNRNEIVWQARSFTVSKALWIACNLLEQW 84
Query: 68 ERK-VVPARSSDRSENQASHGSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLI 127
++ VVP ++ +E A++ WSPPA+G FKLN DA+ G+G I+RD GS +
Sbjct: 85 RKENVVPPLATGETET-ANNSKWSPPAAGKFKLNVDAAVFTNQRKCGLGFIIRDDQGSFV 144
Query: 128 LAGCKQIPYRWDIKTLESYAIHEGLESYVKALEELDLRQKPPL-EVELDSSAAIKAITRA 187
A Q+ D E+ + E L S++K+ P + E+E+D+ A+ R
Sbjct: 145 AARATQVHGIIDPALAEALGVREAL-SWLKS-------NFPQVHEIEMDAITVYNALHRD 204
Query: 188 EEDQSELSLFVEGVTDLIPAANAVRFSKCSRAANVGAHNLVRAS 228
E D S L +E L +RF R AN AH L + +
Sbjct: 205 EPDFSYFGLIIEDCLSLARNIPNIRFLWTRRTANKAAHILAQTA 239
BLAST of Lcy01g003700 vs. ExPASy TrEMBL
Match:
A0A1R3GVP2 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23000 PE=4 SV=1)
HSP 1 Score: 89.0 bits (219), Expect = 3.4e-14
Identity = 61/202 (30.20%), Postives = 94/202 (46.53%), Query Frame = 0
Query: 30 IIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQASHGSWSP 89
+++W LW RN H A +++ ++ + E E+ R + Q WSP
Sbjct: 752 VVLWLLWMNRNKVIHERICALPSVLVIKATRLVHEMEQS--QCRRENNGVLQRMVHVWSP 811
Query: 90 PASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPYRWDIKTLESYAIHEGL 149
PA FK+NADA + N G+G ++RDS G + L +I + D+ E YA+ GL
Sbjct: 812 PARNCFKVNADAVFHASRNEAGLGVVIRDSRGVVFLCATARIDHVRDVLFAEIYALQFGL 871
Query: 150 ESYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSELSLFVEGVTDLIPAANAVRF 209
K+ +D EVE DSS AI I + E E + V+ + + ++ +F
Sbjct: 872 -LVAKSYNLVD------CEVESDSSLAISEINKLEGSLWEGGVLVDQIRHIASLFHSCKF 931
Query: 210 SKCSRAANVGAHNLVRASLQVG 232
S +R AN AH L +VG
Sbjct: 932 SYVNRVANKFAHELAHLDCEVG 944
BLAST of Lcy01g003700 vs. ExPASy TrEMBL
Match:
A0A5P1FW40 (RNase H domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F28990 PE=4 SV=1)
HSP 1 Score: 89.0 bits (219), Expect = 3.4e-14
Identity = 66/224 (29.46%), Postives = 105/224 (46.88%), Query Frame = 0
Query: 8 TPPDYWQRLASILNIRDQNKA--AIIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEF 67
T P++ ++L + QN A A+ W +W RN + + K + LE++
Sbjct: 25 TAPNFKGWFNAMLQNQQQNLALIAMTCWAIWNNRNEIVWQARSFTVSKALWIACNLLEQW 84
Query: 68 ERK-VVPARSSDRSENQASHGSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLI 127
++ VVP ++ +E A++ WSPPA+G FKLN DA+ G+G I+RD GS +
Sbjct: 85 RKENVVPPLATSETET-ANNSKWSPPAAGKFKLNVDAAVFTNQRKCGLGFIIRDDQGSFV 144
Query: 128 LAGCKQIPYRWDIKTLESYAIHEGLESYVKALEELDLRQKPPL-EVELDSSAAIKAITRA 187
A Q+ D E+ + E L S++K+ P + E+E+D+ A+ R
Sbjct: 145 AARATQVHGIIDPALAEALGVREAL-SWLKS-------NFPQVHEIEMDAITVYNALHRD 204
Query: 188 EEDQSELSLFVEGVTDLIPAANAVRFSKCSRAANVGAHNLVRAS 228
E D S L +E L +RF R AN AH L + +
Sbjct: 205 EPDFSYFGLIIEDCLSLARNIPNIRFLWTRRTANKAAHILAQTA 239
BLAST of Lcy01g003700 vs. NCBI nr
Match:
XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])
HSP 1 Score: 99.0 bits (245), Expect = 6.8e-17
Identity = 68/220 (30.91%), Postives = 108/220 (49.09%), Query Frame = 0
Query: 24 DQNKAAIIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQAS 83
++ ++ II W +W RN S G ++ I L I +Y+ + +S N+
Sbjct: 8 ERRRSMIIAWQIWEMRNKSIFKGVHSETRDIQLVIDRYIINSAGR--DTNLKGKSANKDL 67
Query: 84 H----------GSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPY 143
H W PP S S+KLN DA+W +N+GG+G ILRD G +I A C+ I
Sbjct: 68 HLIRRIGDNTGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRT 127
Query: 144 RWDIKTLESYAIHEGL----ESYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSE 203
+I LE AI EGL + + + +++ R P+ +E DS AI + R +DQ+E
Sbjct: 128 ERNITYLEVMAICEGLRAIRQEHCRPIQQEHCR---PIHLESDSLEAIHLLHRQCQDQTE 187
Query: 204 LSLFVEGVTDLIPAANAVRFSKCSRAANVGAHNLVRASLQ 230
+ +E + ++ V SR AN AH+L R +++
Sbjct: 188 IIWLLEEIWQMMEDMKIVSMRHISREANKVAHDLARRAME 222
BLAST of Lcy01g003700 vs. NCBI nr
Match:
XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])
HSP 1 Score: 98.2 bits (243), Expect = 1.2e-16
Identity = 68/216 (31.48%), Postives = 106/216 (49.07%), Query Frame = 0
Query: 24 DQNKAAIIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQAS 83
++ ++ II W +W RN S G + I L+I +Y+ + + +S N+
Sbjct: 8 ERRRSMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIINSAGRNTNLKG--KSTNKDL 67
Query: 84 H----------GSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPY 143
H W PP S S+KLN +A+W +N+GG+G ILRD G +I A C+ I
Sbjct: 68 HLIRRIEDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRA 127
Query: 144 RWDIKTLESYAIHEGLESYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSELSLF 203
+I LE AI EGL +A+ + R P+ +E DS AI + R +DQ+E+
Sbjct: 128 ERNITYLEVMAICEGL----RAIRQEHCR---PIHLESDSLEAIHLLHRQCQDQTEIIWL 187
Query: 204 VEGVTDLIPAANAVRFSKCSRAANVGAHNLVRASLQ 230
+E + ++ V SR AN AH L R +++
Sbjct: 188 LEEIWQMMKDMEIVSMRHISREANKVAHGLARRAME 214
BLAST of Lcy01g003700 vs. NCBI nr
Match:
XP_023880912.1 (uncharacterized protein LOC111993298 [Quercus suber])
HSP 1 Score: 94.7 bits (234), Expect = 1.3e-15
Identity = 65/240 (27.08%), Postives = 102/240 (42.50%), Query Frame = 0
Query: 2 SLGDCWTPPDYW--------QRLASILNIRDQNK-----AAIIIWCLWFERNSSKHSGKM 61
SL + W P W Q + ++N+ Q ++ WC+W RN + + K
Sbjct: 908 SLKEIWNPCFSWVRTEVPYLQDMLELINLVGQRANGLELFGVVAWCIWTYRNKLRLNEKG 967
Query: 62 ADIEKIILSISKYLEEFERKVVPARSSDRSENQASHGSWSPPASGSFKLNADASWCDRSN 121
+K+ + YL +F+ K R R EN W PP G FK N D + S
Sbjct: 968 VPSDKLFETARSYLLDFQSKFQVTRGQQRKENT----KWLPPGDGLFKANYDGAVFAESE 1027
Query: 122 SGGVGCILRDSNGSLILAGCKQIPYRWDIKTLESYAIHEGLESYVKALEELDLRQKPPLE 181
G+G I+RDS G ++ A ++IPY ++ LE+ A K + EL L E
Sbjct: 1028 EAGIGVIVRDSKGDVLAALAEKIPYLGSVEVLEALAARRA----AKFVVELGL---TAAE 1087
Query: 182 VELDSSAAIKAITRAEEDQSELSLFVEGVTDLIPAANAVRFSKCSRAANVGAHNLVRASL 229
E DS A+ A E S + + ++ ++ + FS R N AH L + ++
Sbjct: 1088 FEGDSEVVWTALKVANEAHSAMGVIIKDTLSIVGSLRTFSFSHTRRQGNCVAHALAKRAI 1136
BLAST of Lcy01g003700 vs. NCBI nr
Match:
ONK67926.1 (uncharacterized protein A4U43_C05F5270 [Asparagus officinalis])
HSP 1 Score: 89.4 bits (220), Expect = 5.4e-14
Identity = 66/224 (29.46%), Postives = 105/224 (46.88%), Query Frame = 0
Query: 8 TPPDYWQRLASILNIRDQNKA--AIIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEF 67
T P++ ++L + QN A A+ W +W RN + + K + LE++
Sbjct: 25 TAPNFKDWFNAMLQNQQQNLALIAMTCWAIWNNRNEIVWQARSFTVSKALWIACNLLEQW 84
Query: 68 ERK-VVPARSSDRSENQASHGSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLI 127
++ VVP ++ +E A++ WSPPA+G FKLN DA+ G+G I+RD GS +
Sbjct: 85 RKENVVPPLATGETET-ANNSKWSPPAAGKFKLNVDAAVFTNQRKCGLGFIIRDDQGSFV 144
Query: 128 LAGCKQIPYRWDIKTLESYAIHEGLESYVKALEELDLRQKPPL-EVELDSSAAIKAITRA 187
A Q+ D E+ + E L S++K+ P + E+E+D+ A+ R
Sbjct: 145 AARATQVHGIIDPALAEALGVREAL-SWLKS-------NFPQVHEIEMDAITVYNALHRD 204
Query: 188 EEDQSELSLFVEGVTDLIPAANAVRFSKCSRAANVGAHNLVRAS 228
E D S L +E L +RF R AN AH L + +
Sbjct: 205 EPDFSYFGLIIEDCLSLARNIPNIRFLWTRRTANKAAHILAQTA 239
BLAST of Lcy01g003700 vs. NCBI nr
Match:
ONK81429.1 (uncharacterized protein A4U43_C01F28990 [Asparagus officinalis])
HSP 1 Score: 89.0 bits (219), Expect = 7.0e-14
Identity = 66/224 (29.46%), Postives = 105/224 (46.88%), Query Frame = 0
Query: 8 TPPDYWQRLASILNIRDQNKA--AIIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEF 67
T P++ ++L + QN A A+ W +W RN + + K + LE++
Sbjct: 25 TAPNFKGWFNAMLQNQQQNLALIAMTCWAIWNNRNEIVWQARSFTVSKALWIACNLLEQW 84
Query: 68 ERK-VVPARSSDRSENQASHGSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLI 127
++ VVP ++ +E A++ WSPPA+G FKLN DA+ G+G I+RD GS +
Sbjct: 85 RKENVVPPLATSETET-ANNSKWSPPAAGKFKLNVDAAVFTNQRKCGLGFIIRDDQGSFV 144
Query: 128 LAGCKQIPYRWDIKTLESYAIHEGLESYVKALEELDLRQKPPL-EVELDSSAAIKAITRA 187
A Q+ D E+ + E L S++K+ P + E+E+D+ A+ R
Sbjct: 145 AARATQVHGIIDPALAEALGVREAL-SWLKS-------NFPQVHEIEMDAITVYNALHRD 204
Query: 188 EEDQSELSLFVEGVTDLIPAANAVRFSKCSRAANVGAHNLVRAS 228
E D S L +E L +RF R AN AH L + +
Sbjct: 205 EPDFSYFGLIIEDCLSLARNIPNIRFLWTRRTANKAAHILAQTA 239
BLAST of Lcy01g003700 vs. TAIR 10
Match:
AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 44.3 bits (103), Expect = 1.9e-04
Identity = 42/179 (23.46%), Postives = 77/179 (43.02%), Query Frame = 0
Query: 73 RSSDRSENQASHGSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIP 132
++ +R+ + + + WSPP K N DAS +R+ G+G ILR+S G++I G +
Sbjct: 91 QNGNRNADPSRNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQ 150
Query: 133 YRWDIKTLESYAIHEGLES-----YVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQ 192
R + E + +++ + K + E D + I + +
Sbjct: 151 GRMTTEEAECSTLIWAIQASYGFGHKKVIFEGD-------------NQTITRMINTKSSN 210
Query: 193 SELSLFVEGVTDLIPAANAVRFSKCSRAANVGAHNLVRASLQVG-DFSFFGR---FLSP 243
L F++ + IP+ ++ FS R N A L + +++ +S F FLSP
Sbjct: 211 PRLQHFLDTIQSWIPSFESIEFSFKHREQNGCADFLAKQAIKENTQWSLFHSCPYFLSP 256
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DSV1 | 3.3e-17 | 30.91 | uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1CP26 | 5.6e-17 | 31.48 | uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A5P1EPS3 | 2.6e-14 | 29.46 | RNase H domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F... | [more] |
A0A1R3GVP2 | 3.4e-14 | 30.20 | Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23000 PE=4 SV... | [more] |
A0A5P1FW40 | 3.4e-14 | 29.46 | RNase H domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F... | [more] |
Match Name | E-value | Identity | Description | |
XP_022156777.1 | 6.8e-17 | 30.91 | uncharacterized protein LOC111023608 [Momordica charantia] | [more] |
XP_022143535.1 | 1.2e-16 | 31.48 | uncharacterized protein LOC111013412 [Momordica charantia] | [more] |
XP_023880912.1 | 1.3e-15 | 27.08 | uncharacterized protein LOC111993298 [Quercus suber] | [more] |
ONK67926.1 | 5.4e-14 | 29.46 | uncharacterized protein A4U43_C05F5270 [Asparagus officinalis] | [more] |
ONK81429.1 | 7.0e-14 | 29.46 | uncharacterized protein A4U43_C01F28990 [Asparagus officinalis] | [more] |
Match Name | E-value | Identity | Description | |
AT5G65005.1 | 1.9e-04 | 23.46 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |