Lcy01g003220 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g003220
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ethylene-responsive transcription factor 1B-like
Location	Chr01: 3841155 .. 3842212 (+)
RNA-Seq Expression	Lcy01g003220
Synteny	Lcy01g003220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAACAGAGCAGTGGCCTCCTCCCTTGATGAACCACAATTTCCTTCATCAATTCTTCTAAGATTTCAATGAATTCTTCATTCTTTCACTTCCAGAACTCCGATTTCTCGCCGGAATCTTCCCTCGGCTCCTTCGAATCTCTCCGATGGGAAGGTTTTCAAATCAACGACAACTCTCTGCCCTTCAACGAGAATGATTCCGGCGAAATGCTCCTCCACAGCTTAATCTCCGAGGCCGCCGTGTACCCACCAGAGAATTCTCTCCGGCAGGCTCCGATCAAAGATGAGGAGGTCGATTCGCTCGGAGAGGAAGACTCCCACAAGCAGAAATCCTACAGAGGAGTCCGCCAGCGGCCGTGGGGGAAATTCGCGGCGGAGATCCGGGACTCGACCCGCCACGGCGTTCGGGTCTGGCTCGGGACATTCGACAGCGCCGAGGAGGCCGCTTTGGCCTACGATCAAGCCGCTTTTTCGATGCGGGGCTCGGCGGCCGTTCTCAATTTTCCGGTGGAAAGAGTTCAGGAATCGCTAAAGGAGATGGAGATGATCAACTCCGCCGTCGGCGACGGCGACGGCGGATCTCCGGTGGTGGCTTTGAAGAGAAAACACTCGATGAGGAAGAAGTTCACGAGGAGAAAGAGCAAAGAGAGAGATGGAAATGGGAAAATGGAGAGTAATGTGGTTGTTTTGGAAGATCTTGGTCCTGATTATTTGGAAGAACTTTTGGAGTCGTCGGAGAATCTCCGGCCGTGGTGAATTACCTTTCGGCGACTAGAAATCCCGACACTTCCGTGCTCGGGACGAGAAATTATTTGAGGAGCTAGAACAACGTGAAAGTTTTGATCGAGCAGTAGATGGTTAAAAAGAAACAGCTACATTACGACGATCGCACATCAATCATTTTTCTTTCCTTTTGTTTATAATTTTGCTCCTTAGATCTTCATGTGATATACACATAGATCACTGCCATTAGTTAATATGGTTTTCAAGATTTTGCATAATTTTTTCCTTGCCTTTTTTAAGCAAGAGAAAAATAACAAAATCTTTTTTTGTGTGTG

mRNA sequence

AGAAAACAGAGCAGTGGCCTCCTCCCTTGATGAACCACAATTTCCTTCATCAATTCTTCTAAGATTTCAATGAATTCTTCATTCTTTCACTTCCAGAACTCCGATTTCTCGCCGGAATCTTCCCTCGGCTCCTTCGAATCTCTCCGATGGGAAGGTTTTCAAATCAACGACAACTCTCTGCCCTTCAACGAGAATGATTCCGGCGAAATGCTCCTCCACAGCTTAATCTCCGAGGCCGCCGTGTACCCACCAGAGAATTCTCTCCGGCAGGCTCCGATCAAAGATGAGGAGGTCGATTCGCTCGGAGAGGAAGACTCCCACAAGCAGAAATCCTACAGAGGAGTCCGCCAGCGGCCGTGGGGGAAATTCGCGGCGGAGATCCGGGACTCGACCCGCCACGGCGTTCGGGTCTGGCTCGGGACATTCGACAGCGCCGAGGAGGCCGCTTTGGCCTACGATCAAGCCGCTTTTTCGATGCGGGGCTCGGCGGCCGTTCTCAATTTTCCGGTGGAAAGAGTTCAGGAATCGCTAAAGGAGATGGAGATGATCAACTCCGCCGTCGGCGACGGCGACGGCGGATCTCCGGTGGTGGCTTTGAAGAGAAAACACTCGATGAGGAAGAAGTTCACGAGGAGAAAGAGCAAAGAGAGAGATGGAAATGGGAAAATGGAGAGTAATGTGGTTGTTTTGGAAGATCTTGGTCCTGATTATTTGGAAGAACTTTTGGAGTCGTCGGAGAATCTCCGGCCGTGGTGAATTACCTTTCGGCGACTAGAAATCCCGACACTTCCGTGCTCGGGACGAGAAATTATTTGAGGAGCTAGAACAACGTGAAAGTTTTGATCGAGCAGTAGATGGTTAAAAAGAAACAGCTACATTACGACGATCGCACATCAATCATTTTTCTTTCCTTTTGTTTATAATTTTGCTCCTTAGATCTTCATGTGATATACACATAGATCACTGCCATTAGTTAATATGGTTTTCAAGATTTTGCATAATTTTTTCCTTGCCTTTTTTAAGCAAGAGAAAAATAACAAAATCTTTTTTTGTGTGTG

Coding sequence (CDS)

ATGAATTCTTCATTCTTTCACTTCCAGAACTCCGATTTCTCGCCGGAATCTTCCCTCGGCTCCTTCGAATCTCTCCGATGGGAAGGTTTTCAAATCAACGACAACTCTCTGCCCTTCAACGAGAATGATTCCGGCGAAATGCTCCTCCACAGCTTAATCTCCGAGGCCGCCGTGTACCCACCAGAGAATTCTCTCCGGCAGGCTCCGATCAAAGATGAGGAGGTCGATTCGCTCGGAGAGGAAGACTCCCACAAGCAGAAATCCTACAGAGGAGTCCGCCAGCGGCCGTGGGGGAAATTCGCGGCGGAGATCCGGGACTCGACCCGCCACGGCGTTCGGGTCTGGCTCGGGACATTCGACAGCGCCGAGGAGGCCGCTTTGGCCTACGATCAAGCCGCTTTTTCGATGCGGGGCTCGGCGGCCGTTCTCAATTTTCCGGTGGAAAGAGTTCAGGAATCGCTAAAGGAGATGGAGATGATCAACTCCGCCGTCGGCGACGGCGACGGCGGATCTCCGGTGGTGGCTTTGAAGAGAAAACACTCGATGAGGAAGAAGTTCACGAGGAGAAAGAGCAAAGAGAGAGATGGAAATGGGAAAATGGAGAGTAATGTGGTTGTTTTGGAAGATCTTGGTCCTGATTATTTGGAAGAACTTTTGGAGTCGTCGGAGAATCTCCGGCCGTGGTGA

Protein sequence

MNSSFFHFQNSDFSPESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYPPENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFDSAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRKHSMRKKFTRRKSKERDGNGKMESNVVVLEDLGPDYLEELLESSENLRPW

Homology

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BLAST of Lcy01g003220 vs. ExPASy Swiss-Prot
Match: Q8LDC8 (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2)

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-54
Identity = 125/220 (56.82%), Postives = 153/220 (69.55%), Query Frame = 0


Query: 11  SDFSPESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYPPENSLRQAPI 70
           S FSPE S+GS     +     N+ SLPFNENDS EM L+ LI ++     + +   +  
Sbjct: 11  SGFSPEYSIGSSPD-SFSSSSSNNYSLPFNENDSEEMFLYGLIEQST----QQTYIDSDS 70

Query: 71  KDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFDSAEEAALAYD 130
           +D  + S+    S  +KSYRGVR+RPWGKFAAEIRDSTR+G+RVWLGTF+SAEEAALAYD
Sbjct: 71  QDLPIKSVSSRKS--EKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYD 130

Query: 131 QAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRKHSMRKKFTRRK 190
           QAAFSMRGS+A+LNF  ERVQESL E++         DG SPVVALKRKHSMR++ T +K
Sbjct: 131 QAAFSMRGSSAILNFSAERVQESLSEIKYTYE-----DGCSPVVALKRKHSMRRRMTNKK 190

Query: 191 SKERDGNGKME--SNVVVLEDLGPDYLEELLESSENLRPW 229
           +K+ D + +     NVVV EDLG  YLEELL SSEN   W
Sbjct: 191 TKDSDFDHRSVKLDNVVVFEDLGEQYLEELLGSSENSGTW 218

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BLAST of Lcy01g003220 vs. ExPASy Swiss-Prot
Match: A0A3Q7I5Y9 (Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-51
Identity = 115/194 (59.28%), Postives = 144/194 (74.23%), Query Frame = 0


Query: 35  NSLPFNENDSGEMLLHSLISEAAVYPPENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQ 94
           NSLPFN ND+ +MLL++L++E +     NS     IK+EEV S  EE   K K+YRGVR+
Sbjct: 14  NSLPFNVNDTQDMLLYNLVAEGSSQETVNSSSSYGIKEEEVTSYEEE--RKDKNYRGVRK 73

Query: 95  RPWGKFAAEIRDSTRHGVRVWLGTFDSAEEAALAYDQAAFSMRGSAAVLNFPVERVQESL 154
           RPWGK+AAEIRDSTR+GVRVWLGTFD+AEEAALAYDQAAF+MRGS A+LNFPVE V+ESL
Sbjct: 74  RPWGKYAAEIRDSTRNGVRVWLGTFDNAEEAALAYDQAAFAMRGSMAILNFPVEIVKESL 133

Query: 155 KEMEMINSAVGDGDGGSPVVALKRKHSMRKKFTRRKSKERDGNGKMESNVVVLEDLGPDY 214
            EM+       DG+  SPV+ LK+++SMR+K   RK++ R        +VVV EDLG +Y
Sbjct: 134 NEMK----CRFDGN-CSPVIELKKRYSMRRKSVSRKNRAR-------KDVVVFEDLGAEY 193

Query: 215 LEELLESSENLRPW 229
           LEELL SSE++  W
Sbjct: 194 LEELLISSESITNW 193

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BLAST of Lcy01g003220 vs. ExPASy Swiss-Prot
Match: Q8VYM0 (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-38
Identity = 112/250 (44.80%), Postives = 141/250 (56.40%), Query Frame = 0


Query: 14  SPESSLGSFESLRW-EGFQINDNSLP-------------FNENDSGEMLLHSLISEAAVY 73
           SP S   S ESL W E   ++ +S P             F   +S EM++   I    V 
Sbjct: 11  SPSSWSSSQESLLWNESCFLDQSSEPQAFFCPNYDYSDDFFSFESPEMMIKEEIQNGDV- 70

Query: 74  PPENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTF 133
              NS        EE + +G ++   ++SYRGVR+RPWGKFAAEIRDSTR+G+RVWLGTF
Sbjct: 71  --SNS--------EEEEKVGIDE---ERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTF 130

Query: 134 DSAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRK 193
           D AEEAALAYDQAAF+ +GS A LNFPVE V+ESLK+ME +N      DGGSPV+ALKRK
Sbjct: 131 DKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNL----HDGGSPVMALKRK 190

Query: 194 HSMRKK---------------------------FTRRKSKERDGNGKMESNVVVLEDLGP 223
           HS+R +                            T R S ++    +    +VV EDLG 
Sbjct: 191 HSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGA 242

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BLAST of Lcy01g003220 vs. ExPASy Swiss-Prot
Match: Q9LND1 (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.0e-38
Identity = 113/261 (43.30%), Postives = 145/261 (55.56%), Query Frame = 0


Query: 7   HFQNSDFSPE----SSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVY--P 66
           +F + +FSPE    SS  S ES  WE                 E  LH    ++ +   P
Sbjct: 6   NFLSGEFSPENSSSSSWSSQESFLWE-----------------ESFLHQSFDQSFLLSSP 65

Query: 67  PEN------SLRQAPIKDE--EVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGV 126
            +N      +   + IK+E  E     EE+   +KSYRGVR+RPWGKFAAEIRDSTR G+
Sbjct: 66  TDNYCDDFFAFESSIIKEEGKEATVAAEEE---EKSYRGVRKRPWGKFAAEIRDSTRKGI 125

Query: 127 RVWLGTFDSAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSP 186
           RVWLGTFD+AE AALAYDQAAF+++GS AVLNFP + V+ESL++ME +N      DG SP
Sbjct: 126 RVWLGTFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNL----NDGESP 185

Query: 187 VVALKRKHSMRKKFTRRK------------------------------SKERDGNGKMES 222
           V+ALKRKHSMR +   +K                              S+++      ES
Sbjct: 186 VIALKRKHSMRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQES 242

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BLAST of Lcy01g003220 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.8e-27
Identity = 67/125 (53.60%), Postives = 83/125 (66.40%), Query Frame = 0


Query: 35  NSLPFNENDSGEMLLHSLISEA-----AVYPPENSLRQAPIKDEEVDSLGEEDSHKQKSY 94
           + LP NENDS EM+L+ +++EA        P  N L         +  +G       K Y
Sbjct: 7   SDLPLNENDSQEMVLYEVLNEANALNIPYLPQRNQLLPRNNILRPLQCIG-------KKY 66

Query: 95  RGVRQRPWGKFAAEIRDSTRHGVRVWLGTFDSAEEAALAYDQAAFSMRGSAAVLNFPVER 154
           RGVR+RPWGK+AAEIRDS RHG RVWLGTF++AEEAALAYD+AAF MRG+ A+LNFP E 
Sbjct: 67  RGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSEI 124

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BLAST of Lcy01g003220 vs. ExPASy TrEMBL
Match: A0A6J1H2S4 (ethylene-responsive transcription factor 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111459951 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.5e-108
Identity = 204/227 (89.87%), Postives = 216/227 (95.15%), Query Frame = 0


Query: 1   MNSSFFHFQNSDFSPESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYP 60
           MNSSFF FQN+DFSPESS GSFESL+WEGFQIND+SLPFNENDSGEMLLHSLISEAA YP
Sbjct: 1   MNSSFFQFQNADFSPESSFGSFESLQWEGFQINDSSLPFNENDSGEMLLHSLISEAAGYP 60

Query: 61  PENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFD 120
           PE +LRQAPIKDEEVDSLGEE+ HK+KSYRGVR+RPWGKFAAEIRDSTR+G RVWLGTFD
Sbjct: 61  PEIALRQAPIKDEEVDSLGEEEPHKRKSYRGVRRRPWGKFAAEIRDSTRNGARVWLGTFD 120

Query: 121 SAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRKH 180
           SAE AALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINS+   GDGGSPVVALKRKH
Sbjct: 121 SAEAAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSSENGGDGGSPVVALKRKH 180

Query: 181 SMRKKFTRRKSKERDGNGKMESNVVVLEDLGPDYLEELLESSENLRP 228
           SMRKKFTRRKSKERDG+GK+ +NVVVLEDLGPDYLEELLESSENLRP
Sbjct: 181 SMRKKFTRRKSKERDGSGKIVNNVVVLEDLGPDYLEELLESSENLRP 227

[Close]

BLAST of Lcy01g003220 vs. ExPASy TrEMBL
Match: A0A6J1KZT9 (ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111499095 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.4e-108
Identity = 204/227 (89.87%), Postives = 213/227 (93.83%), Query Frame = 0


Query: 1   MNSSFFHFQNSDFSPESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYP 60
           MNSSFFH QN+DFSPESS GSFESL WEGFQINDNSLPFNENDSGEMLLHSLISEAA YP
Sbjct: 1   MNSSFFHSQNADFSPESSFGSFESLLWEGFQINDNSLPFNENDSGEMLLHSLISEAAGYP 60

Query: 61  PENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFD 120
           PE SLRQAPIKDEEVDSLGEE+ HK+K YRGVR+RPWGKFAAEIRDSTR+G RVWLGTFD
Sbjct: 61  PEISLRQAPIKDEEVDSLGEEEPHKRKCYRGVRRRPWGKFAAEIRDSTRNGARVWLGTFD 120

Query: 121 SAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRKH 180
           SAE AALAYDQAAFSMRGS AVLNFPVERVQESLKEMEMINS+   GDGGSPVVALKRKH
Sbjct: 121 SAEAAALAYDQAAFSMRGSTAVLNFPVERVQESLKEMEMINSSENGGDGGSPVVALKRKH 180

Query: 181 SMRKKFTRRKSKERDGNGKMESNVVVLEDLGPDYLEELLESSENLRP 228
           SMRKKFTRRKSKERDG+G +E+NVVVLEDLGPDYLEELLESSENLRP
Sbjct: 181 SMRKKFTRRKSKERDGSGTIENNVVVLEDLGPDYLEELLESSENLRP 227

[Close]

BLAST of Lcy01g003220 vs. ExPASy TrEMBL
Match: A0A5D3CA48 (Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00540 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 8.3e-107
Identity = 203/228 (89.04%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MNSSFFHFQNSDFSPESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYP 60
           MNSSFFH QNSD SP+SS  SFESL WEGFQIND+SLPFN+NDSGEMLLHSLISEA V P
Sbjct: 1   MNSSFFHSQNSDLSPQSSFSSFESLPWEGFQINDDSLPFNQNDSGEMLLHSLISEAYVDP 60

Query: 61  PENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFD 120
           PENS RQ PIKDEEVDSLGEED HK+KSYRGVR+RPWGKFAAEIRDSTRHGVRVWLGTFD
Sbjct: 61  PENSPRQVPIKDEEVDSLGEEDPHKRKSYRGVRRRPWGKFAAEIRDSTRHGVRVWLGTFD 120

Query: 121 SAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRKH 180
           SAE AALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSA   GDGGSPVVALKRKH
Sbjct: 121 SAEAAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAAEGGDGGSPVVALKRKH 180

Query: 181 SMRKKFTRRKSKERDGNGKMESNVVVLEDLGPDYLEELLESSENLRPW 229
           SMRKKFTRRKSKE DG GK E+NVVVLEDLG DYLEELLESSEN+RPW
Sbjct: 181 SMRKKFTRRKSKEIDGIGKSENNVVVLEDLGSDYLEELLESSENVRPW 228

[Close]

BLAST of Lcy01g003220 vs. ExPASy TrEMBL
Match: A0A1S3CDC8 (ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC103499414 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 8.3e-107
Identity = 203/228 (89.04%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MNSSFFHFQNSDFSPESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYP 60
           MNSSFFH QNSD SP+SS  SFESL WEGFQIND+SLPFN+NDSGEMLLHSLISEA V P
Sbjct: 1   MNSSFFHSQNSDLSPQSSFSSFESLPWEGFQINDDSLPFNQNDSGEMLLHSLISEAYVDP 60

Query: 61  PENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFD 120
           PENS RQ PIKDEEVDSLGEED HK+KSYRGVR+RPWGKFAAEIRDSTRHGVRVWLGTFD
Sbjct: 61  PENSPRQVPIKDEEVDSLGEEDPHKRKSYRGVRRRPWGKFAAEIRDSTRHGVRVWLGTFD 120

Query: 121 SAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRKH 180
           SAE AALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSA   GDGGSPVVALKRKH
Sbjct: 121 SAEAAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAAEGGDGGSPVVALKRKH 180

Query: 181 SMRKKFTRRKSKERDGNGKMESNVVVLEDLGPDYLEELLESSENLRPW 229
           SMRKKFTRRKSKE DG GK E+NVVVLEDLG DYLEELLESSEN+RPW
Sbjct: 181 SMRKKFTRRKSKEIDGIGKSENNVVVLEDLGSDYLEELLESSENVRPW 228

[Close]

BLAST of Lcy01g003220 vs. ExPASy TrEMBL
Match: A0A0A0LKN3 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G177210 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.6e-104
Identity = 201/228 (88.16%), Postives = 208/228 (91.23%), Query Frame = 0


Query: 1   MNSSFFHFQNSDFSPESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYP 60
           MNSSFFH QNSD SPESS  SFESLRWEGFQIND+SLPFN+NDS EMLLHSLISEA V P
Sbjct: 1   MNSSFFHSQNSDLSPESSFSSFESLRWEGFQINDHSLPFNQNDSDEMLLHSLISEAYVDP 60

Query: 61  PENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFD 120
            ENS RQ PIKDEEVDSLGEED HK+KSYRGVR+RPWGK+AAEIRDSTR+GVRVWLGTFD
Sbjct: 61  QENSPRQDPIKDEEVDSLGEEDPHKRKSYRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFD 120

Query: 121 SAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRKH 180
           SAE AALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSA   GDGGSPVVALKRKH
Sbjct: 121 SAEAAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAGEGGDGGSPVVALKRKH 180

Query: 181 SMRKKFTRRKSKERDGNGKMESNVVVLEDLGPDYLEELLESSENLRPW 229
           SMRKKFTRRKSKE D  GK E+NVVVLEDLG DYLEELLESSENLRPW
Sbjct: 181 SMRKKFTRRKSKEIDRIGKTENNVVVLEDLGSDYLEELLESSENLRPW 228

[Close]

BLAST of Lcy01g003220 vs. NCBI nr
Match: XP_023547901.1 (ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403.3 bits (1035), Expect = 1.4e-108
Identity = 205/227 (90.31%), Postives = 216/227 (95.15%), Query Frame = 0


Query: 1   MNSSFFHFQNSDFSPESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYP 60
           MNSSFFH QN+DFSPESS GSFESL+WEGFQIND+SLPFNENDSGEMLLHSLISEAA YP
Sbjct: 1   MNSSFFHSQNADFSPESSFGSFESLQWEGFQINDDSLPFNENDSGEMLLHSLISEAAGYP 60

Query: 61  PENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFD 120
           PE SLRQAPIKDEEVDSLGEE+ HK+KSYRGVR+RPWGKFAAEIRDSTR+G RVWLGTFD
Sbjct: 61  PEISLRQAPIKDEEVDSLGEEEPHKRKSYRGVRRRPWGKFAAEIRDSTRNGARVWLGTFD 120

Query: 121 SAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRKH 180
           SAE AALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINS+   GDGGSPVVALKRKH
Sbjct: 121 SAEAAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSSENGGDGGSPVVALKRKH 180

Query: 181 SMRKKFTRRKSKERDGNGKMESNVVVLEDLGPDYLEELLESSENLRP 228
           SMRKKFTRRKSKERDG+GK+ +NVVVLEDLGPDYLEELLESSENLRP
Sbjct: 181 SMRKKFTRRKSKERDGSGKIVNNVVVLEDLGPDYLEELLESSENLRP 227

[Close]

BLAST of Lcy01g003220 vs. NCBI nr
Match: XP_022958782.1 (ethylene-responsive transcription factor 1B-like [Cucurbita moschata])

HSP 1 Score: 402.1 bits (1032), Expect = 3.1e-108
Identity = 204/227 (89.87%), Postives = 216/227 (95.15%), Query Frame = 0


Query: 1   MNSSFFHFQNSDFSPESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYP 60
           MNSSFF FQN+DFSPESS GSFESL+WEGFQIND+SLPFNENDSGEMLLHSLISEAA YP
Sbjct: 1   MNSSFFQFQNADFSPESSFGSFESLQWEGFQINDSSLPFNENDSGEMLLHSLISEAAGYP 60

Query: 61  PENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFD 120
           PE +LRQAPIKDEEVDSLGEE+ HK+KSYRGVR+RPWGKFAAEIRDSTR+G RVWLGTFD
Sbjct: 61  PEIALRQAPIKDEEVDSLGEEEPHKRKSYRGVRRRPWGKFAAEIRDSTRNGARVWLGTFD 120

Query: 121 SAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRKH 180
           SAE AALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINS+   GDGGSPVVALKRKH
Sbjct: 121 SAEAAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSSENGGDGGSPVVALKRKH 180

Query: 181 SMRKKFTRRKSKERDGNGKMESNVVVLEDLGPDYLEELLESSENLRP 228
           SMRKKFTRRKSKERDG+GK+ +NVVVLEDLGPDYLEELLESSENLRP
Sbjct: 181 SMRKKFTRRKSKERDGSGKIVNNVVVLEDLGPDYLEELLESSENLRP 227

[Close]

BLAST of Lcy01g003220 vs. NCBI nr
Match: XP_023006325.1 (ethylene-responsive transcription factor 1B-like [Cucurbita maxima])

HSP 1 Score: 401.0 bits (1029), Expect = 7.0e-108
Identity = 204/227 (89.87%), Postives = 213/227 (93.83%), Query Frame = 0


Query: 1   MNSSFFHFQNSDFSPESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYP 60
           MNSSFFH QN+DFSPESS GSFESL WEGFQINDNSLPFNENDSGEMLLHSLISEAA YP
Sbjct: 1   MNSSFFHSQNADFSPESSFGSFESLLWEGFQINDNSLPFNENDSGEMLLHSLISEAAGYP 60

Query: 61  PENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFD 120
           PE SLRQAPIKDEEVDSLGEE+ HK+K YRGVR+RPWGKFAAEIRDSTR+G RVWLGTFD
Sbjct: 61  PEISLRQAPIKDEEVDSLGEEEPHKRKCYRGVRRRPWGKFAAEIRDSTRNGARVWLGTFD 120

Query: 121 SAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRKH 180
           SAE AALAYDQAAFSMRGS AVLNFPVERVQESLKEMEMINS+   GDGGSPVVALKRKH
Sbjct: 121 SAEAAALAYDQAAFSMRGSTAVLNFPVERVQESLKEMEMINSSENGGDGGSPVVALKRKH 180

Query: 181 SMRKKFTRRKSKERDGNGKMESNVVVLEDLGPDYLEELLESSENLRP 228
           SMRKKFTRRKSKERDG+G +E+NVVVLEDLGPDYLEELLESSENLRP
Sbjct: 181 SMRKKFTRRKSKERDGSGTIENNVVVLEDLGPDYLEELLESSENLRP 227

[Close]

BLAST of Lcy01g003220 vs. NCBI nr
Match: KAG6574920.1 (Ethylene-responsive transcription factor 1B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 399.8 bits (1026), Expect = 1.6e-107
Identity = 204/227 (89.87%), Postives = 214/227 (94.27%), Query Frame = 0


Query: 1   MNSSFFHFQNSDFSPESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYP 60
           MNSSFF  QN+DFSPESS GSFESLRWEGFQIND+SLPFNENDSGEMLLHSLISEAA YP
Sbjct: 1   MNSSFFQSQNADFSPESSFGSFESLRWEGFQINDSSLPFNENDSGEMLLHSLISEAAGYP 60

Query: 61  PENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFD 120
           PE SLRQAPIKDEEVDSLGEE+ HK+K YRGVR+RPWGKFAAEIRDSTR+G RVWLGTFD
Sbjct: 61  PEISLRQAPIKDEEVDSLGEEEPHKRKCYRGVRRRPWGKFAAEIRDSTRNGARVWLGTFD 120

Query: 121 SAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRKH 180
           SAE AALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINS+   GDGGSPVVALKRKH
Sbjct: 121 SAEAAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSSENGGDGGSPVVALKRKH 180

Query: 181 SMRKKFTRRKSKERDGNGKMESNVVVLEDLGPDYLEELLESSENLRP 228
           SMRKKFTRRKSKERDG+GK+ +NVVVLEDLGPDYLEELLESSENLRP
Sbjct: 181 SMRKKFTRRKSKERDGSGKIVNNVVVLEDLGPDYLEELLESSENLRP 227

[Close]

BLAST of Lcy01g003220 vs. NCBI nr
Match: XP_008460636.1 (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo] >KAA0065672.1 ethylene-responsive transcription factor 1B-like [Cucumis melo var. makuwa] >TYK08230.1 ethylene-responsive transcription factor 1B-like [Cucumis melo var. makuwa])

HSP 1 Score: 396.4 bits (1017), Expect = 1.7e-106
Identity = 203/228 (89.04%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MNSSFFHFQNSDFSPESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYP 60
           MNSSFFH QNSD SP+SS  SFESL WEGFQIND+SLPFN+NDSGEMLLHSLISEA V P
Sbjct: 1   MNSSFFHSQNSDLSPQSSFSSFESLPWEGFQINDDSLPFNQNDSGEMLLHSLISEAYVDP 60

Query: 61  PENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFD 120
           PENS RQ PIKDEEVDSLGEED HK+KSYRGVR+RPWGKFAAEIRDSTRHGVRVWLGTFD
Sbjct: 61  PENSPRQVPIKDEEVDSLGEEDPHKRKSYRGVRRRPWGKFAAEIRDSTRHGVRVWLGTFD 120

Query: 121 SAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRKH 180
           SAE AALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSA   GDGGSPVVALKRKH
Sbjct: 121 SAEAAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAAEGGDGGSPVVALKRKH 180

Query: 181 SMRKKFTRRKSKERDGNGKMESNVVVLEDLGPDYLEELLESSENLRPW 229
           SMRKKFTRRKSKE DG GK E+NVVVLEDLG DYLEELLESSEN+RPW
Sbjct: 181 SMRKKFTRRKSKEIDGIGKSENNVVVLEDLGSDYLEELLESSENVRPW 228

[Close]

BLAST of Lcy01g003220 vs. TAIR 10
Match: AT3G23240.1 (ethylene response factor 1 )

HSP 1 Score: 214.5 bits (545), Expect = 8.6e-56
Identity = 125/220 (56.82%), Postives = 153/220 (69.55%), Query Frame = 0


Query: 11  SDFSPESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYPPENSLRQAPI 70
           S FSPE S+GS     +     N+ SLPFNENDS EM L+ LI ++     + +   +  
Sbjct: 11  SGFSPEYSIGSSPD-SFSSSSSNNYSLPFNENDSEEMFLYGLIEQST----QQTYIDSDS 70

Query: 71  KDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFDSAEEAALAYD 130
           +D  + S+    S  +KSYRGVR+RPWGKFAAEIRDSTR+G+RVWLGTF+SAEEAALAYD
Sbjct: 71  QDLPIKSVSSRKS--EKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYD 130

Query: 131 QAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRKHSMRKKFTRRK 190
           QAAFSMRGS+A+LNF  ERVQESL E++         DG SPVVALKRKHSMR++ T +K
Sbjct: 131 QAAFSMRGSSAILNFSAERVQESLSEIKYTYE-----DGCSPVVALKRKHSMRRRMTNKK 190

Query: 191 SKERDGNGKME--SNVVVLEDLGPDYLEELLESSENLRPW 229
           +K+ D + +     NVVV EDLG  YLEELL SSEN   W
Sbjct: 191 TKDSDFDHRSVKLDNVVVFEDLGEQYLEELLGSSENSGTW 218

[Close]

BLAST of Lcy01g003220 vs. TAIR 10
Match: AT2G31230.1 (ethylene-responsive element binding factor 15 )

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 112/250 (44.80%), Postives = 141/250 (56.40%), Query Frame = 0


Query: 14  SPESSLGSFESLRW-EGFQINDNSLP-------------FNENDSGEMLLHSLISEAAVY 73
           SP S   S ESL W E   ++ +S P             F   +S EM++   I    V 
Sbjct: 11  SPSSWSSSQESLLWNESCFLDQSSEPQAFFCPNYDYSDDFFSFESPEMMIKEEIQNGDV- 70

Query: 74  PPENSLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTF 133
              NS        EE + +G ++   ++SYRGVR+RPWGKFAAEIRDSTR+G+RVWLGTF
Sbjct: 71  --SNS--------EEEEKVGIDE---ERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTF 130

Query: 134 DSAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVVALKRK 193
           D AEEAALAYDQAAF+ +GS A LNFPVE V+ESLK+ME +N      DGGSPV+ALKRK
Sbjct: 131 DKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNL----HDGGSPVMALKRK 190

Query: 194 HSMRKK---------------------------FTRRKSKERDGNGKMESNVVVLEDLGP 223
           HS+R +                            T R S ++    +    +VV EDLG 
Sbjct: 191 HSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGA 242

[Close]

BLAST of Lcy01g003220 vs. TAIR 10
Match: AT1G06160.1 (octadecanoid-responsive Arabidopsis AP2/ERF 59 )

HSP 1 Score: 159.1 bits (401), Expect = 4.3e-39
Identity = 113/261 (43.30%), Postives = 145/261 (55.56%), Query Frame = 0


Query: 7   HFQNSDFSPE----SSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVY--P 66
           +F + +FSPE    SS  S ES  WE                 E  LH    ++ +   P
Sbjct: 6   NFLSGEFSPENSSSSSWSSQESFLWE-----------------ESFLHQSFDQSFLLSSP 65

Query: 67  PEN------SLRQAPIKDE--EVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGV 126
            +N      +   + IK+E  E     EE+   +KSYRGVR+RPWGKFAAEIRDSTR G+
Sbjct: 66  TDNYCDDFFAFESSIIKEEGKEATVAAEEE---EKSYRGVRKRPWGKFAAEIRDSTRKGI 125

Query: 127 RVWLGTFDSAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSP 186
           RVWLGTFD+AE AALAYDQAAF+++GS AVLNFP + V+ESL++ME +N      DG SP
Sbjct: 126 RVWLGTFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNL----NDGESP 185

Query: 187 VVALKRKHSMRKKFTRRK------------------------------SKERDGNGKMES 222
           V+ALKRKHSMR +   +K                              S+++      ES
Sbjct: 186 VIALKRKHSMRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQES 242

[Close]

BLAST of Lcy01g003220 vs. TAIR 10
Match: AT4G17500.1 (ethylene responsive element binding factor 1 )

HSP 1 Score: 112.5 bits (280), Expect = 4.6e-25
Identity = 62/136 (45.59%), Postives = 85/136 (62.50%), Query Frame = 0


Query: 37  LPFNENDSGEMLLHSLISEA----------------------AVYPPEN--SLRQAPIKD 96
           LP  ENDS +ML++ ++++A                       +  PE+  ++   P+K 
Sbjct: 71  LPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESFAAVDSVPVKK 130

Query: 97  EEVDSLGEE-DSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFDSAEEAALAYDQ 148
           E+   +     + K K YRGVRQRPWGKFAAEIRD  ++G RVWLGTF++AE+AALAYD+
Sbjct: 131 EKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDR 190

[Close]

BLAST of Lcy01g003220 vs. TAIR 10
Match: AT5G47220.1 (ethylene responsive element binding factor 2 )

HSP 1 Score: 109.4 bits (272), Expect = 3.9e-24
Identity = 81/207 (39.13%), Postives = 104/207 (50.24%), Query Frame = 0


Query: 16  ESSLGSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEA------------------- 75
           E+ L   ES     F  +   LP  ENDS +ML++ L+ +A                   
Sbjct: 27  ENELRLNESTPSSCFTESWGGLPLKENDSEDMLVYGLLKDAFHFDTSSSDLSCLFDFPAV 86

Query: 76  AVYPPEN--SLRQAPIKDEEVDSLGEEDSHKQKSYRGVRQRPWGKFAAEIRDSTRHGVRV 135
            V P EN  ++ + P K   V     E + K K YRGVRQRPWGKFAAEIRD  ++G RV
Sbjct: 87  KVEPTENFTAMEEKPKKAIPV----TETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARV 146

Query: 136 WLGTFDSAEEAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAVGDGDGGSPVV 195
           WLGTF++AE+AALAYD AAF MRGS A+LNFP+            +NS      G    V
Sbjct: 147 WLGTFETAEDAALAYDIAAFRMRGSRALLNFPLR-----------VNS------GEPDPV 206

Query: 196 ALKRKHSMRKKFTRRKSKERDGNGKME 202
            +  K S     +   S     NGK++
Sbjct: 207 RITSKRSSSSSSSSSSSTSSSENGKLK 212

The following BLAST results are available for this feature:

BLAST of Lcy01g003220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDC8	1.2e-54	56.82	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
A0A3Q7I5Y9	2.1e-51	59.28	Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1	[more]
Q8VYM0	1.6e-38	44.80	Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9LND1	6.0e-38	43.30	Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 ...	[more]
O04681	4.8e-27	53.60	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]

BLAST of Lcy01g003220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2S4	1.5e-108	89.87	ethylene-responsive transcription factor 1B-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1KZT9	3.4e-108	89.87	ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A5D3CA48	8.3e-107	89.04	Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CDC8	8.3e-107	89.04	ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0LKN3	6.6e-104	88.16	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G177210 PE=...	[more]

BLAST of Lcy01g003220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547901.1	1.4e-108	90.31	ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022958782.1	3.1e-108	89.87	ethylene-responsive transcription factor 1B-like [Cucurbita moschata]	[more]
XP_023006325.1	7.0e-108	89.87	ethylene-responsive transcription factor 1B-like [Cucurbita maxima]	[more]
KAG6574920.1	1.6e-107	89.87	Ethylene-responsive transcription factor 1B, partial [Cucurbita argyrosperma sub...	[more]
XP_008460636.1	1.7e-106	89.04	PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo] >KAA0...	[more]

BLAST of Lcy01g003220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23240.1	8.6e-56	56.82	ethylene response factor 1	[more]
AT2G31230.1	1.1e-39	44.80	ethylene-responsive element binding factor 15	[more]
AT1G06160.1	4.3e-39	43.30	octadecanoid-responsive Arabidopsis AP2/ERF 59	[more]
AT4G17500.1	4.6e-25	45.59	ethylene responsive element binding factor 1	[more]
AT5G47220.1	3.9e-24	39.13	ethylene responsive element binding factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 89..100 score: 74.24 coord: 112..128 score: 68.34
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 88..152 e-value: 1.3E-38 score: 144.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 88..138 e-value: 1.1E-15 score: 57.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 88..146 score: 22.918894
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 87..147 e-value: 3.11274E-31 score: 107.357
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 87..148 e-value: 9.1E-27 score: 95.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..203
None	No IPR available	PANTHER	PTHR31190:SF132	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B	coord: 31..221
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 31..221
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 88..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g003220.1	Lcy01g003220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity