Lag0042173 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0042173
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionHomeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Locationchr13: 37928758 .. 37934894 (+)
RNA-Seq ExpressionLag0042173
SyntenyLag0042173
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATAATGTATTGGTCCTAGAATGGAAAGGAACTCTTGTCTATTACTATTTGATTTCAAACAACCCAGAAAAAAAATCTCTCAAGGCCACTTTAGAGTCATCTGTTTTCTCTCACTATATCTTAGAAGGTTTTCTTCACTGTCAGGCTTGGAGTGTTCCTGAAGTTCCAAGACCACTTTATGAATCAACAAAAATTCTAGCTCAGAGAATGACTGTATCGGTAAGAATTGTTGCTTTAACCGGTCACCCTTTCTTTCGGTCATATATTTTATCAAATATTGTGCTTAAATTTTGTGGAATATGCCTTACGCTACGTTCGGCAAATTGCTTAAGAGGCAAGTGGAGAAATTCAATTGGGTGGGGCCACCAACCAGTTGTTTTAAGGACTTTCAGTCAAAGGCTCTGTAGGTAAAGCTCTACAACTTTGTCTCAAAGTTGGGTCATGTTGAACACTTTTGGTAAGGACTTGCAATATTTGAAGATTGCCTCCAAACTCTAGGTCCAAGCTCCTAAGTTGAAAATTTAATAACTTAAAACCATTGCTGTCTCTAAAAGCTAGTTCTTGTAGGTACGTCCAGTTGTATTTGAATTTGTTCTGGCCTTTTTTGAAGCATATAAGAATCATATAAATATGCAGTCTACTACTTTTAATCTGTGGTAAAAGAACTAAGAGGACTATTCTACCCCATTTCACGTTTGAATGACATTTAATCTCTTCAAGTTAAGACATTAAAGTATAAGTGTACTTATGTTGCTGTCCATTTCACTTTCAATTATGTTGTTGTCTTGTCATTTATCATATGTTCTTGTATGCACAAATATTCTACTGTACATGCTTCCATGCATTGTAGGTGTTCTTATCTGTGATATTATCAATCCTTTGAATTCTACAGTCGATCTCATGCTTTTTGATCTTGTTCATCGAGTTATAAGGTTGATTTATTTCTACTGGCTAGTGGGTATTTGACCTTTAGCAGTAAGGAACAATTTCCCAATGAATTTGATGTGTTTGCAAATTACAGGTTATACTATTTATCAACTTGATCTCTCATGGTCATGGCCCATCTGAGATGAGTTGAATTGGCCACTATTTATTGACACTAAACATGCTTTCTATTTCTCACTCAAACAGTACTTTCACAAAATGAAGTTTTTTCTCATACTATAAAAGAATAAAGATACTTTCTCTGTCATCTTAATTTTGTTGGCGTATTTGTATTTTGGCTGACTTTACAATTTACAAGCAACTGGGTAAAAAATTTTGACCAATGAGAGGATAAAAGAAAAGAAAGTTATTTTAAGGATTGTCATTACTGAGAAAAAAAGTTGTTGGCTTCTTATTATGAGTCTATGACAAACATTTTTTAGTTGCTTGTTTCAACTGTGACTTCCAATCTTTGAATGGTTCATTTTCTCTTCTTCATAGGTCTCTCCGATCTCTCTGAGGAAACTCTTCACTTTTAGCCATGGGAGAAGTTCAAGAAAAGTGTCTGCAAATTATAGGTTAGTATTCAACAAATCAATACCATGAAAGAAAAAGAGAAAATCTGAAGTAATTTTTATGAGCTTTTTGATTTTTTCATATTGAATTAATATTCTGTGTGGTTTATTTAATTTTGAGGTGAAGAAATTTTGAGGATATTAGGAGTTATTGTGTGAACTGTTTGCTAAAGATGATCTACCTATGTTATCTTAATTTGTAATTCTTAGGCGTTGGTCTAAAAATTTGAGTTGCTTTTGTAAGTATTTGTTTTTTAATCTCATTTGTTGAGAATCTTCACATGAATTGTGCCACATGATACAAGAAAGAGCCTCATGTTTGATTTTCTAGCCTACTCTTTCATTATATACAATTTATGAGATCGAATATTGGTTATATGTTGTTATTTGTTGTTTTGGTAAGGGAGAATTTAGGACGTAACGTTTGAATTTCCAACATTTGTTGTGTTTATATTCTTAGTTGTTGTGCTCAAGGTTTATTCAAGGTGATAGAAGAGGTCCAAAACATTCTGGAAATTATCCAGAGAACCATATTCCAATGGTGCAATTTATGTTAGAAAACATTAATGTGAAATATCGTTACTTTTGAGATTTTTCTTGTGAGCCAGCTAAAGTTTGATCATGGATCATTAATGATTATATTAATACTTCATCTCCTAATTAATAAAATTTGTTTCCTTGTAGATTCAAAAGTGGAGAAAGAAAAGCAAAAGAACAATGGTATTGCTTAGTTTTTATACTTTTCATTCTAAGCTTGGTTGTTTGATTTTGATGTATGAAACAATAGTTTAGTTGAGCATATACTTAAGCTCTCTATATATTTTTCATCACTTTAAAATTCAATCAATGTTTTATTTCAGAATTGAGCCCAAGAAATTTGAAGATGCTCTTTTCAAAGAGGTACTTCCATTTTCCCTAATTTGTTCTCTTTTGTGTAACTTAATTTTTCGTTGCATGACATTTAGGTGGTATTTTTGAATGGTTAGACTATGTTGGTGTGTTGATAATCTTCTCTCTGGAAAATAAATGTTGAGTACTATTTTAACCCAAGTTAGTACATTGCTATCCCTGTTAGAATATTCTTCTTATTGTCATTCCAAATATCTAGCTCATTTCTTCACTCTTTCCCAATTCTTCTCATTTTCTTCTTGCTCACCAATGAATGAAAGTAGAAATCAAAATAGAAGAAAGATGAGAAGATATAAAAGAAAGAATAGTGGATTAAATCAAAGTTGTAGGTCTAGCAACTTCACGAACATGAGGTAACTTCTCAAAAATTCATCTTTGTCTTTTATTTTTGTTTAACTTTTTCTTAATCTGATTATATAGATTTTGAATTTTTTATGTTTAATTTTTCTTTCAAATTCTTTGTTTTTGAGTTATCTATATACTCTTTTGAGTTTTTTAGATATCGTTAGTTTATTCCTAGGTTGTTTTTTTTAATATTTATTTTTAGAGTAGTAATTAAACAAAAAAAAATGGTGAGGTTTACACACAAAATGGAAGAAAAAAGGGGCTACAAAACAAAGTAAGTTGGTTGTATTATTATCAAAACCATGAATATACACAAGTGTTTTGTCTACTAAATAGAGTTTTACAACCAAAATGCTCAACTAAAAAGGAGGGATATACACAAAAGGCATAAGATAAATGCCAATGGTAACTAATAAAAAAGGGGTTCATCAACAATTAGAGATATTGCTTTTAAGGAAATAAAAAGAACAAATTGTTGTTCAATCTGCAGGTGCAATATGTGTTGTTAATAGCATGATTTCTTCTTAATGTCATGTGCAATATGACTTCATAGATTAGAGTACATAGTTTACAACTAGAGTTGTAGTTTAATTTCTCTTCTAAGTTCTTTTCCCTAATTAATTTCTCCACTCTAATCTTTTTTCTTCTTTATTTGATAACTTAGCTATTTTTCTTTTTTATTTGAGAACTTAGCTATTTAGGAAAAGATGTCTCATATATAATTATTGTCCTTCAATTTGTTGCAAGTAAAATCATGAGGTCTTGTTAGTTACTCATCTCTGTTTTGATGGATCAAAATGTGGCCCCTTCATGCTTATCTTGATAGTGAGGAGGCAAGAACCAAAAGAATAGAAGAGGCAACAATGGCAAAAAAAAAGTAGAGGTCTCAAGTTTGATTTAGTTTCTTCAAATTAAAATATTGATTTAGTTTATTGATTATGTAAATATATATATTGATCTTATAAACATTTTTTTATAGGTGAATGAAAGGATGACACACCAACATATTTATTGGAGGATATGTTCATTTGAATCTCTTGAACCATGTGTGTACATGTTATTGAAATGAATGTGTTTCGGGATTTTGTACGTTTTTTATTTTCATTTTTAGTTTAGGATTATGAATTACATCTGTATCAATAAGAACACTTTGAGATTATCAACTTAGTATTACTCTTGAAAAAGTTTATGTAAATGCATTTAAATGTTTATGTAATTGAGTTGATATTGTAATAACATTTGAATAATTTGTTAGTTATATAAAATGCTATAAAACTGTTGTGTACTACTTGAAAATGGTACAAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGTAAAAAATGTAAAAAAAAAAAAAAAAAAAAAAAAACTCCAGTAAAAGTTACTATCTATAACAATGTCTACTAGAACGATGTTCAAAATGCTATGAAAGATCAATTATAGCGTTTTTATACTAATGTTATGAAAGGTTTCAATTACATCAAAATAATGCAATTAAAAATAAGCTTTTTTATAACTCTTTCTATAGCATTGCAAAAACGCTATGAAAAGTCAGACTTTCAAAGACTTTCAATAACATCAGCTATGACAACGTGTCTAAAATCGTTTTTTTACAGCTATGAAAAATGCTATTAAAGAGCAATTATAGCGTTTTTTGTTAACGCTATGAAAAGTTTCTATAACATATAAATTATGCAATGAAAAATAGAATTTTTATAGCACTTTTTATAGCACTGAAAAAACGCTATGAAAAGTCAAGGACTTTCAATAGCATCGGCTACGACGGCGTTTGAAAAACGCTATAAAAAGGCTATGATAGCGTTTTTTTTTTTACGCTATCGTATGTGATATTTGTTGTAGTGTACCCACCAATTTTTGGATAGAGTTTTTAATTTACTTGAATTAAAGTTTGGGCATAATCCAAATTTTATCCCAAGTGGAAATTTCAATAAATTTCAATTCAAATTTCATTCAAGCCAAAATTTGGAATTTTATTTTAAACTAAAGTTTGGGCATAATCCAAATTTCTTATGTCAAACTTATGTTCAAATTAAAATTGCCACAAATTTTGATTAATTGGTGCAAAATATGTGTAAAAAAAAATCAAAATTATGAACCAACTTCATGTTTTGATTAAATTGACACATGCAAGGGAGTTAAAAATCAAGGGGCATATTTTGATTCCCAAATTATCTTTTTCAAGACTCAACCACACATAATTTGTGCATAAACCTTGAAAAGGGACATTTGTTGAAGGAGAAATTTCGGTCAATCACAAATTGTCACGTCATTATACAAATATAATGACAAAATTAAAATTAAATAAATTTGAGACTTTAGTTGACATGTGTCCCAAATTTAATTTGAAAACAGAGTTGACAACCACATGCCTTTAATATGACCATTTGATCAAAGTTGGGTCATATAATATTTGGGTTATATGATATTTGGGTCAAATTTAAATCAAACTCAAATCCAAATGATTCGGTCCAAAATCAGTAAAGCCTAAGTCCAAATGATTTGGCCCAAGATCAATGAGCCCAAGTCCAATGGGTTAGGATCAAGCCCAGTGGACCAAGTCCAAAGTCAATTAAGCCCAAGCCCATGTTCATGGAGAACTCTACAAATAGGAGAGTTCTCCTTCATTTTGGGGAGTCAGAAGTTGGAGATTTTAGAGAGAATTCATAACTTAGAGCACTTGAAGACGTCCAGAAGATCAAAAGACTCCTTGAAGCTCACGAAGCCCTCGAAACAACTTCAATCTCAAGAACAAGCTACAAAGCTCTTGAGACGACCTCAAACTCGAGATCAAGCATTCCACCATTCAAGCGAAACACATTCACACACAAGATAGAGTATTAGAGGATTAAAGTTAGAGATTGTACATTCATACGCATACGTTTACAAATACAGAATTATTCCACGTGTCTCATCTTTGAAGTTACGTGTGAACACATGTATAATAGAGTATACGCTAATACAAAATCTCCAACATTTTCAAAATAATTGGAGCTTCAAAAGAACCGTTATTTGTAAAAGCTTTCTTAAAAAAATACAGCGTTTCAAACTCACTGTCATGAAGACATAGTCATTTATTAAACTAATATTTTATTTAATCATTCAAATTTATTTACTTTAATATAGTTTTTTGTTAATTTAATATTATTATTGTTATAGGTAATCTTGGACCACACCGACGAACAAGGAGCTGACGAGGACAATCGGGCGAAAGTAGGACTAGAAAACCGACCCAGAGGAAGATCGGACCAAAGGGGTCGGGCCATGGTCGGCCTCGGCAAAAGGCCGAGGCCGACCATTAGGCCCACTGGCGCGGGCCGAGCTCGTTCACCTCCTTTCGGCCCCTGA

mRNA sequence

ATGTATAATGTATTGGTCCTAGAATGGAAAGGAACTCTTGTCTATTACTATTTGATTTCAAACAACCCAGAAAAAAAATCTCTCAAGGCCACTTTAGAGTCATCTGTTTTCTCTCACTATATCTTAGAAGGTTTTCTTCACTGTCAGGCTTGGAGTGTTCCTGAAGTTCCAAGACCACTTTATGAATCAACAAAAATTCTAGCTCAGAGAATGACTGTATCGGTCTCTCCGATCTCTCTGAGGAAACTCTTCACTTTTAGCCATGGGAGAAGTTCAAGAAAAGTGTCTGCAAATTATAGGTTTATTCAAGGTGATAGAAGAGGTCCAAAACATTCTGGAAATTATCCAGAGAACCATATTCCAATGGTGCAATTTATAATTGAGCCCAAGAAATTTGAAGATGCTCTTTTCAAAGAGGTAATCTTGGACCACACCGACGAACAAGGAGCTGACGAGGACAATCGGGCGAAAGTAGGACTAGAAAACCGACCCAGAGGAAGATCGGACCAAAGGGGTCGGGCCATGGTCGGCCTCGGCAAAAGGCCGAGGCCGACCATTAGGCCCACTGGCGCGGGCCGAGCTCGTTCACCTCCTTTCGGCCCCTGA

Coding sequence (CDS)

ATGTATAATGTATTGGTCCTAGAATGGAAAGGAACTCTTGTCTATTACTATTTGATTTCAAACAACCCAGAAAAAAAATCTCTCAAGGCCACTTTAGAGTCATCTGTTTTCTCTCACTATATCTTAGAAGGTTTTCTTCACTGTCAGGCTTGGAGTGTTCCTGAAGTTCCAAGACCACTTTATGAATCAACAAAAATTCTAGCTCAGAGAATGACTGTATCGGTCTCTCCGATCTCTCTGAGGAAACTCTTCACTTTTAGCCATGGGAGAAGTTCAAGAAAAGTGTCTGCAAATTATAGGTTTATTCAAGGTGATAGAAGAGGTCCAAAACATTCTGGAAATTATCCAGAGAACCATATTCCAATGGTGCAATTTATAATTGAGCCCAAGAAATTTGAAGATGCTCTTTTCAAAGAGGTAATCTTGGACCACACCGACGAACAAGGAGCTGACGAGGACAATCGGGCGAAAGTAGGACTAGAAAACCGACCCAGAGGAAGATCGGACCAAAGGGGTCGGGCCATGGTCGGCCTCGGCAAAAGGCCGAGGCCGACCATTAGGCCCACTGGCGCGGGCCGAGCTCGTTCACCTCCTTTCGGCCCCTGA

Protein sequence

MYNVLVLEWKGTLVYYYLISNNPEKKSLKATLESSVFSHYILEGFLHCQAWSVPEVPRPLYESTKILAQRMTVSVSPISLRKLFTFSHGRSSRKVSANYRFIQGDRRGPKHSGNYPENHIPMVQFIIEPKKFEDALFKEVILDHTDEQGADEDNRAKVGLENRPRGRSDQRGRAMVGLGKRPRPTIRPTGAGRARSPPFGP
Homology
[Close]
BLAST of Lag0042173 vs. ExPASy Swiss-Prot
Match: O04291 (Homeobox-leucine zipper protein ATHB-14 OS=Arabidopsis thaliana OX=3702 GN=ATHB-14 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.9e-04
Identity = 21/25 (84.00%), Postives = 24/25 (96.00%), Query Frame = 0 

Query: 50  AWSVPEVPRPLYESTKILAQRMTVS 75
           AWSVPEV RPLYES+KILAQ+MTV+
Sbjct: 351 AWSVPEVMRPLYESSKILAQKMTVA 375

[Close]
BLAST of Lag0042173 vs. ExPASy Swiss-Prot
Match: Q9SE43 (Homeobox-leucine zipper protein REVOLUTA OS=Arabidopsis thaliana OX=3702 GN=REV PE=1 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 3.9e-04
Identity = 19/29 (65.52%), Postives = 27/29 (93.10%), Query Frame = 0 

Query: 46  LHCQAWSVPEVPRPLYESTKILAQRMTVS 75
           L+ +AWSVP+V RPLYES+K++AQ+MT+S
Sbjct: 334 LNLEAWSVPDVLRPLYESSKVVAQKMTIS 362

[Close]
BLAST of Lag0042173 vs. TAIR 10
Match: AT2G34710.1 (Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein )

HSP 1 Score: 46.6 bits (109), Expect = 2.7e-05
Identity = 21/25 (84.00%), Postives = 24/25 (96.00%), Query Frame = 0 

Query: 50  AWSVPEVPRPLYESTKILAQRMTVS 75
           AWSVPEV RPLYES+KILAQ+MTV+
Sbjct: 351 AWSVPEVMRPLYESSKILAQKMTVA 375

[Close]
BLAST of Lag0042173 vs. TAIR 10
Match: AT5G60690.1 (Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein )

HSP 1 Score: 46.6 bits (109), Expect = 2.7e-05
Identity = 19/29 (65.52%), Postives = 27/29 (93.10%), Query Frame = 0 

Query: 46  LHCQAWSVPEVPRPLYESTKILAQRMTVS 75
           L+ +AWSVP+V RPLYES+K++AQ+MT+S
Sbjct: 334 LNLEAWSVPDVLRPLYESSKVVAQKMTIS 362

The following BLAST results are available for this feature:
BLAST of Lag0042173 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0042173 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O042913.9e-0484.00Homeobox-leucine zipper protein ATHB-14 OS=Arabidopsis thaliana OX=3702 GN=ATHB-... [more]
Q9SE433.9e-0465.52Homeobox-leucine zipper protein REVOLUTA OS=Arabidopsis thaliana OX=3702 GN=REV ... [more]
BLAST of Lag0042173 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lag0042173 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G34710.12.7e-0584.00Homeobox-leucine zipper family protein / lipid-binding START domain-containing p... [more]
AT5G60690.12.7e-0565.52Homeobox-leucine zipper family protein / lipid-binding START domain-containing p... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0042173.1Lag0042173.1mRNA