Lag0042156 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGGGATCTCTGCTAGCAACTCTCATATGGGTAGGATTTGGAAAAATGTGTGGAAACTTAAAATCCCCTCTAAGATCAAGCTATTTTGTTGGAAAGCCTTAAAAAGATCTCTCCCAAATAATCTTAATCTCCAAAATAGAGGTGTTCGACTATCAAATTTATGTCCTATTTGTGATTCCCAAATTGAAAATACAAATCACTGCCTTTTCACATGTAACAGAGCACAAGAAGTATGGAATCTAACCTTTCAAAATGTTTTTCTGGAGGTGGATTTTTGCGGGAGTTTTGTTGATCGATGGATTAAACTGGATTCACCTCTAACCTTGGAAGAGCTCGAGTTGGTGGTTGTGGCTTGCTGGGCGATTTGGAGCGACCAAAATAAGCTAGTCCATGGCGATAGCATCTCCCCTGCATCTGCCAAAAGCAATTGGATCAGAAGCTATCTCGATTCTTTCAGGAAAGCGAACCCTAGACGGAAGACTAACCAATTGGCCCATCGTATTCGCGCTTCTGATGAGAATCGACCTTCCCGCTGGTTGCCGCCTCCTTCGGATTATTGGAAGCTTAATGTTGATGCTGCATGTCTTCAATACGCTTCTTTGTCGAGGTTAGGGACAGTTTGCAGAAACAAGGATGGTGATTTAGTTCGCTTCCTCCCATTTTGTTGATTTTTGGATGGATCCTTTGAGGGCTGAAGTGAGAGCTATTTGGGAGGGTTTGAAGAATGCCTTAACGATGGGTTGCCTTAGGCTGAGAGTGGAATCTATAGTGGAATTAAATAGTTTGCTGGCGATCAATTTCATTAATAAGAATTATGTGGTTTGGGAGGACATGGAAGCTGATGTGGCCAGAGTGTGGGAGTTGACTTCTCAATTTTTGGACATTGACTTCTCCTTTATTCCAAGATATTGTAACGAGTTAGCAGACTTAGGGGGTGTTTGGGGCACTGAATAG ATGGATGGGATCTCTGCTAGCAACTCTCATATGGGTAGGATTTGGAAAAATGTGTGGAAACTTAAAATCCCCTCTAAGATCAAGCTATTTTGTTGGAAAGCCTTAAAAAGATCTCTCCCAAATAATCTTAATCTCCAAAATAGAGGTGTTCGACTATCAAATTTATGTCCTATTTGTGATTCCCAAATTGAAAATACAAATCACTGCCTTTTCACATGTAACAGAGCACAAGAAGTATGGAATCTAACCTTTCAAAATGTTTTTCTGGAGGTGGATTTTTGCGGGAGTTTTGTTGATCGATGGATTAAACTGGATTCACCTCTAACCTTGGAAGAGCTCGAGTTGGTGGTTGTGGCTTGCTGGGCGATTTGGAGCGACCAAAATAAGCTAGTCCATGGCGATAGCATCTCCCCTGCATCTGCCAAAAGCAATTGGATCAGAAGCTATCTCGATTCTTTCAGGAAAGCGAACCCTAGACGGAAGACTAACCAATTGGCCCATCGTATTCGCGCTTCTGATGAGAATCGACCTTCCCGCTGGTTGCCGCCTCCTTCGGATTATTGGAAGCTTAATGTTGATGCTGCATGTCTTCAATACGCTTCTTTGTCGAGGCTGAGAGTGGAATCTATAGTGGAATTAAATAGTTTGCTGGCGATCAATTTCATTAATAAGAATTATGTGGTTTGGGAGGACATGGAAGCTGATGTGGCCAGAGTGTGGGAGTTGACTTCTCAATTTTTGGACATTGACTTCTCCTTTATTCCAAGATATTGTAACGAGTTAGCAGACTTAGGGGGTGTTTGGGGCACTGAATAG ATGGATGGGATCTCTGCTAGCAACTCTCATATGGGTAGGATTTGGAAAAATGTGTGGAAACTTAAAATCCCCTCTAAGATCAAGCTATTTTGTTGGAAAGCCTTAAAAAGATCTCTCCCAAATAATCTTAATCTCCAAAATAGAGGTGTTCGACTATCAAATTTATGTCCTATTTGTGATTCCCAAATTGAAAATACAAATCACTGCCTTTTCACATGTAACAGAGCACAAGAAGTATGGAATCTAACCTTTCAAAATGTTTTTCTGGAGGTGGATTTTTGCGGGAGTTTTGTTGATCGATGGATTAAACTGGATTCACCTCTAACCTTGGAAGAGCTCGAGTTGGTGGTTGTGGCTTGCTGGGCGATTTGGAGCGACCAAAATAAGCTAGTCCATGGCGATAGCATCTCCCCTGCATCTGCCAAAAGCAATTGGATCAGAAGCTATCTCGATTCTTTCAGGAAAGCGAACCCTAGACGGAAGACTAACCAATTGGCCCATCGTATTCGCGCTTCTGATGAGAATCGACCTTCCCGCTGGTTGCCGCCTCCTTCGGATTATTGGAAGCTTAATGTTGATGCTGCATGTCTTCAATACGCTTCTTTGTCGAGGCTGAGAGTGGAATCTATAGTGGAATTAAATAGTTTGCTGGCGATCAATTTCATTAATAAGAATTATGTGGTTTGGGAGGACATGGAAGCTGATGTGGCCAGAGTGTGGGAGTTGACTTCTCAATTTTTGGACATTGACTTCTCCTTTATTCCAAGATATTGTAACGAGTTAGCAGACTTAGGGGGTGTTTGGGGCACTGAATAG MDGISASNSHMGRIWKNVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIENTNHCLFTCNRAQEVWNLTFQNVFLEVDFCGSFVDRWIKLDSPLTLEELELVVVACWAIWSDQNKLVHGDSISPASAKSNWIRSYLDSFRKANPRRKTNQLAHRIRASDENRPSRWLPPPSDYWKLNVDAACLQYASLSRLRVESIVELNSLLAINFINKNYVVWEDMEADVARVWELTSQFLDIDFSFIPRYCNELADLGGVWGTE Homology
BLAST of Lag0042156 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 141.0 bits (354), Expect = 1.5e-29 Identity = 91/308 (29.55%), Postives = 134/308 (43.51%), Query Frame = 0
BLAST of Lag0042156 vs. NCBI nr
Match: XP_030508852.1 (uncharacterized protein LOC115723496 [Cannabis sativa]) HSP 1 Score: 131.3 bits (329), Expect = 1.2e-26 Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 0
BLAST of Lag0042156 vs. NCBI nr
Match: XP_030509188.1 (uncharacterized protein LOC115723863 [Cannabis sativa]) HSP 1 Score: 124.4 bits (311), Expect = 1.5e-24 Identity = 67/198 (33.84%), Postives = 102/198 (51.52%), Query Frame = 0
BLAST of Lag0042156 vs. NCBI nr
Match: XP_030502765.1 (uncharacterized protein LOC115717936 [Cannabis sativa]) HSP 1 Score: 123.6 bits (309), Expect = 2.6e-24 Identity = 69/198 (34.85%), Postives = 101/198 (51.01%), Query Frame = 0
BLAST of Lag0042156 vs. NCBI nr
Match: XP_030969753.1 (uncharacterized protein LOC115990032 [Quercus lobata]) HSP 1 Score: 123.2 bits (308), Expect = 3.3e-24 Identity = 69/248 (27.82%), Postives = 120/248 (48.39%), Query Frame = 0
BLAST of Lag0042156 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 7.5e-30 Identity = 91/308 (29.55%), Postives = 134/308 (43.51%), Query Frame = 0
BLAST of Lag0042156 vs. ExPASy TrEMBL
Match: A0A803Q2K8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 7.2e-25 Identity = 67/198 (33.84%), Postives = 102/198 (51.52%), Query Frame = 0
BLAST of Lag0042156 vs. ExPASy TrEMBL
Match: A0A803P8W5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.1e-24 Identity = 65/203 (32.02%), Postives = 105/203 (51.72%), Query Frame = 0
BLAST of Lag0042156 vs. ExPASy TrEMBL
Match: A0A803QH76 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 4.0e-23 Identity = 62/201 (30.85%), Postives = 105/201 (52.24%), Query Frame = 0
BLAST of Lag0042156 vs. ExPASy TrEMBL
Match: A0A803Q6Z2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 4.0e-23 Identity = 71/217 (32.72%), Postives = 100/217 (46.08%), Query Frame = 0
BLAST of Lag0042156 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 77.0 bits (188), Expect = 2.6e-14 Identity = 74/306 (24.18%), Postives = 120/306 (39.22%), Query Frame = 0
BLAST of Lag0042156 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 67.4 bits (163), Expect = 2.0e-11 Identity = 48/194 (24.74%), Postives = 78/194 (40.21%), Query Frame = 0
BLAST of Lag0042156 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 65.5 bits (158), Expect = 7.7e-11 Identity = 51/184 (27.72%), Postives = 74/184 (40.22%), Query Frame = 0
BLAST of Lag0042156 vs. TAIR 10
Match: AT1G10000.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.4e-07 Identity = 67/282 (23.76%), Postives = 110/282 (39.01%), Query Frame = 0
BLAST of Lag0042156 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 50.4 bits (119), Expect = 2.6e-06 Identity = 25/61 (40.98%), Postives = 31/61 (50.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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