Lag0042156 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0042156
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRibonuclease H-like superfamily protein
Locationchr13: 37548193 .. 37549150 (-)
RNA-Seq ExpressionLag0042156
SyntenyLag0042156
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGGATCTCTGCTAGCAACTCTCATATGGGTAGGATTTGGAAAAATGTGTGGAAACTTAAAATCCCCTCTAAGATCAAGCTATTTTGTTGGAAAGCCTTAAAAAGATCTCTCCCAAATAATCTTAATCTCCAAAATAGAGGTGTTCGACTATCAAATTTATGTCCTATTTGTGATTCCCAAATTGAAAATACAAATCACTGCCTTTTCACATGTAACAGAGCACAAGAAGTATGGAATCTAACCTTTCAAAATGTTTTTCTGGAGGTGGATTTTTGCGGGAGTTTTGTTGATCGATGGATTAAACTGGATTCACCTCTAACCTTGGAAGAGCTCGAGTTGGTGGTTGTGGCTTGCTGGGCGATTTGGAGCGACCAAAATAAGCTAGTCCATGGCGATAGCATCTCCCCTGCATCTGCCAAAAGCAATTGGATCAGAAGCTATCTCGATTCTTTCAGGAAAGCGAACCCTAGACGGAAGACTAACCAATTGGCCCATCGTATTCGCGCTTCTGATGAGAATCGACCTTCCCGCTGGTTGCCGCCTCCTTCGGATTATTGGAAGCTTAATGTTGATGCTGCATGTCTTCAATACGCTTCTTTGTCGAGGTTAGGGACAGTTTGCAGAAACAAGGATGGTGATTTAGTTCGCTTCCTCCCATTTTGTTGATTTTTGGATGGATCCTTTGAGGGCTGAAGTGAGAGCTATTTGGGAGGGTTTGAAGAATGCCTTAACGATGGGTTGCCTTAGGCTGAGAGTGGAATCTATAGTGGAATTAAATAGTTTGCTGGCGATCAATTTCATTAATAAGAATTATGTGGTTTGGGAGGACATGGAAGCTGATGTGGCCAGAGTGTGGGAGTTGACTTCTCAATTTTTGGACATTGACTTCTCCTTTATTCCAAGATATTGTAACGAGTTAGCAGACTTAGGGGGTGTTTGGGGCACTGAATAG

mRNA sequence

ATGGATGGGATCTCTGCTAGCAACTCTCATATGGGTAGGATTTGGAAAAATGTGTGGAAACTTAAAATCCCCTCTAAGATCAAGCTATTTTGTTGGAAAGCCTTAAAAAGATCTCTCCCAAATAATCTTAATCTCCAAAATAGAGGTGTTCGACTATCAAATTTATGTCCTATTTGTGATTCCCAAATTGAAAATACAAATCACTGCCTTTTCACATGTAACAGAGCACAAGAAGTATGGAATCTAACCTTTCAAAATGTTTTTCTGGAGGTGGATTTTTGCGGGAGTTTTGTTGATCGATGGATTAAACTGGATTCACCTCTAACCTTGGAAGAGCTCGAGTTGGTGGTTGTGGCTTGCTGGGCGATTTGGAGCGACCAAAATAAGCTAGTCCATGGCGATAGCATCTCCCCTGCATCTGCCAAAAGCAATTGGATCAGAAGCTATCTCGATTCTTTCAGGAAAGCGAACCCTAGACGGAAGACTAACCAATTGGCCCATCGTATTCGCGCTTCTGATGAGAATCGACCTTCCCGCTGGTTGCCGCCTCCTTCGGATTATTGGAAGCTTAATGTTGATGCTGCATGTCTTCAATACGCTTCTTTGTCGAGGCTGAGAGTGGAATCTATAGTGGAATTAAATAGTTTGCTGGCGATCAATTTCATTAATAAGAATTATGTGGTTTGGGAGGACATGGAAGCTGATGTGGCCAGAGTGTGGGAGTTGACTTCTCAATTTTTGGACATTGACTTCTCCTTTATTCCAAGATATTGTAACGAGTTAGCAGACTTAGGGGGTGTTTGGGGCACTGAATAG

Coding sequence (CDS)

ATGGATGGGATCTCTGCTAGCAACTCTCATATGGGTAGGATTTGGAAAAATGTGTGGAAACTTAAAATCCCCTCTAAGATCAAGCTATTTTGTTGGAAAGCCTTAAAAAGATCTCTCCCAAATAATCTTAATCTCCAAAATAGAGGTGTTCGACTATCAAATTTATGTCCTATTTGTGATTCCCAAATTGAAAATACAAATCACTGCCTTTTCACATGTAACAGAGCACAAGAAGTATGGAATCTAACCTTTCAAAATGTTTTTCTGGAGGTGGATTTTTGCGGGAGTTTTGTTGATCGATGGATTAAACTGGATTCACCTCTAACCTTGGAAGAGCTCGAGTTGGTGGTTGTGGCTTGCTGGGCGATTTGGAGCGACCAAAATAAGCTAGTCCATGGCGATAGCATCTCCCCTGCATCTGCCAAAAGCAATTGGATCAGAAGCTATCTCGATTCTTTCAGGAAAGCGAACCCTAGACGGAAGACTAACCAATTGGCCCATCGTATTCGCGCTTCTGATGAGAATCGACCTTCCCGCTGGTTGCCGCCTCCTTCGGATTATTGGAAGCTTAATGTTGATGCTGCATGTCTTCAATACGCTTCTTTGTCGAGGCTGAGAGTGGAATCTATAGTGGAATTAAATAGTTTGCTGGCGATCAATTTCATTAATAAGAATTATGTGGTTTGGGAGGACATGGAAGCTGATGTGGCCAGAGTGTGGGAGTTGACTTCTCAATTTTTGGACATTGACTTCTCCTTTATTCCAAGATATTGTAACGAGTTAGCAGACTTAGGGGGTGTTTGGGGCACTGAATAG

Protein sequence

MDGISASNSHMGRIWKNVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIENTNHCLFTCNRAQEVWNLTFQNVFLEVDFCGSFVDRWIKLDSPLTLEELELVVVACWAIWSDQNKLVHGDSISPASAKSNWIRSYLDSFRKANPRRKTNQLAHRIRASDENRPSRWLPPPSDYWKLNVDAACLQYASLSRLRVESIVELNSLLAINFINKNYVVWEDMEADVARVWELTSQFLDIDFSFIPRYCNELADLGGVWGTE
Homology
BLAST of Lag0042156 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 141.0 bits (354), Expect = 1.5e-29
Identity = 91/308 (29.55%), Postives = 134/308 (43.51%), Query Frame = 0

Query: 5    SASNSHMGRIWKNVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIE 64
            SAS ++ G  W ++WKL +P+KIK+F W++    +P   NL  RG+     C IC  + E
Sbjct: 1122 SASTNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRE 1181

Query: 65   NTNHCLFTCNRAQEVWNLTFQNV-FLEVDFCGSFVDRWIKLDSPLTLEELELVVVACWAI 124
            +  H  F C RA+++W   F  +  L  +   SF++ W  L   L  ++L L  +  W I
Sbjct: 1182 SIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGI 1241

Query: 125  WSDQNKLVHGDSISPASAKSNWIRSYLDSFRKANPRRKTNQLAHRIRASDENRPSRWLPP 184
            W+D+N L+HG  +SP   K  W+  +LDS  +A    + +  + R +++       W P 
Sbjct: 1242 WNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQA----QMSNYSPRTQSNHRPVVQYWRPS 1301

Query: 185  PSDYWKLNVDAAC----------LQYASLSRLRVESI----------------------- 244
             S   KLN DAAC          ++ +S S +   SI                       
Sbjct: 1302 SSVSLKLNTDAACRGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLKFA 1361

Query: 245  ---------VELNSLLAINFINKNYVVWEDMEADVARVWELTSQFLDIDFSFIPRYCNEL 270
                     VE +SLLAI  I        D +  V  +  LT  F  I FS   R CN  
Sbjct: 1362 AASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFSHSSRQCNRA 1421

BLAST of Lag0042156 vs. NCBI nr
Match: XP_030508852.1 (uncharacterized protein LOC115723496 [Cannabis sativa])

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-26
Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 0

Query: 2    DGISASNSHMGRIWKNVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDS 61
            D  + SNS +   W N WKLK+P K+++F WK    SLP    L  R +  S  C IC+S
Sbjct: 1040 DDSTCSNS-IEHWWSNFWKLKLPPKVRIFVWKVFHTSLPVAAELYRRHIAFSPYCTICNS 1099

Query: 62   QIENTNHCLFTCNRAQEVWNLTFQNVFLEVDFCGSFVDRWIKLDSPLTLEELELVVVACW 121
              E  +H LF+C RA+ VW L+  ++  +     S  D  + L + L+  ELEL +V CW
Sbjct: 1100 CEETVHHALFSCPRAKAVWELSNFSIDFQTIERSSTADTLLLLSTSLSSSELELFLVLCW 1159

Query: 122  AIWSDQNKLVHGDSISPASAKSNWIRSYLDSFRKANPRRKTNQLAHRIRASDENRPS--- 181
            +IW ++N + HG+S+   +A + +  SYL  F++A  R K  +      A+  +RPS   
Sbjct: 1160 SIWHERNAIYHGNSVRTPAAVAAYAPSYLTEFQQA--RAKNAKPVTASGAATPSRPSSEF 1219

Query: 182  ----RWLPPPSDYWKLNVDAA 196
                +W  PP    KLN DAA
Sbjct: 1220 IHAPKWTTPPRGRLKLNTDAA 1237

BLAST of Lag0042156 vs. NCBI nr
Match: XP_030509188.1 (uncharacterized protein LOC115723863 [Cannabis sativa])

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-24
Identity = 67/198 (33.84%), Postives = 102/198 (51.52%), Query Frame = 0

Query: 5    SASNSHMGRIWKNVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIE 64
            +AS+  M   W   WK+K+P K+++F WK    +LP    L  R +  S  C IC+S  E
Sbjct: 1001 TASSHSMENWWSTFWKMKLPPKVRIFVWKVFHSTLPVAAELFRRHIATSPHCSICNSAEE 1060

Query: 65   NTNHCLFTCNRAQEVWNLTFQNVFLEVDFCGSFVDRWIKLDSPLTLEELELVVVACWAIW 124
            + NH LF C RA+ VW L+  ++        +  D  + L + L+  E EL +V CW  W
Sbjct: 1061 SINHALFDCPRAKAVWELSSLHIDFHTLRQSASADILLHLSTALSTSEFELFLVLCWCNW 1120

Query: 125  SDQNKLVHGDSISPASAKSNWIRSYLDSFRKANPRRKTNQLAHRIRASDENRPS------ 184
             ++N + HG+++  + A +++  SYL  F+  N R K +Q      A+ + RPS      
Sbjct: 1121 HERNAIYHGNTVRSSQAVASYAPSYLAEFQ--NARAKRSQPTPISIAATDPRPSSEFTHA 1180

Query: 185  -RWLPPPSDYWKLNVDAA 196
             +W  PP    KLN DAA
Sbjct: 1181 PKWTAPPQGRLKLNTDAA 1196

BLAST of Lag0042156 vs. NCBI nr
Match: XP_030502765.1 (uncharacterized protein LOC115717936 [Cannabis sativa])

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-24
Identity = 69/198 (34.85%), Postives = 101/198 (51.01%), Query Frame = 0

Query: 5    SASNSHMGRIWKNVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIE 64
            +AS+S M   W   WK+KIP K+++F WK    +LP    L  R +  S  C IC+S  E
Sbjct: 931  TASSSSMEHWWSTFWKVKIPPKVRIFVWKVFHSTLPVAAELYRRHIATSPYCTICNSAEE 990

Query: 65   NTNHCLFTCNRAQEVWNLTFQNVFLEVDFCGSFVDRWIKLDSPLTLEELELVVVACWAIW 124
            +  H LF+C RA+ VW+L+  N+        +  D  + L + LT  E E  +V CW  W
Sbjct: 991  SITHALFSCPRAKTVWDLSPLNIDFNTLRQTASADILLHLSTVLTTSEYEQFLVICWCNW 1050

Query: 125  SDQNKLVHGDSISPASAKSNWIRSYLDSFRKANPRRKTNQLAHRIRASDENRPS------ 184
             ++N + HG+S+    A + +  SYL  F+ A  R K +Q      A+ + RPS      
Sbjct: 1051 HERNAIYHGNSVRSPQAVAAYAPSYLTEFQSA--RAKRSQPTTSSVAATDPRPSSEFTHA 1110

Query: 185  -RWLPPPSDYWKLNVDAA 196
             +W  PP    KLN +AA
Sbjct: 1111 PKWTAPPRGRLKLNTNAA 1126

BLAST of Lag0042156 vs. NCBI nr
Match: XP_030969753.1 (uncharacterized protein LOC115990032 [Quercus lobata])

HSP 1 Score: 123.2 bits (308), Expect = 3.3e-24
Identity = 69/248 (27.82%), Postives = 120/248 (48.39%), Query Frame = 0

Query: 5    SASNSHMGRIWKNVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIE 64
            S++++ M   WK +W+L +P+KI+ F W+A +  LP  +NL  R +   N   +C S  E
Sbjct: 880  SSNSTRMKEFWKFIWRLNVPNKIRSFTWRACRNILPTKVNLFRRRITADNTYEVCGSFEE 939

Query: 65   NTNHCLFTCNRAQEVWNLTFQNVFLEVDFCGSFVDR--WIKLDSPLTLEELELVVVACWA 124
             T H L+ C+ A+EVW     N    +D C  F+D   + +      +E++ L+V   W 
Sbjct: 940  TTGHALWHCHLAKEVWKEAGMNTDKVMDNCPEFLDLLWYARNVKQWPMEDVGLMVTTAWG 999

Query: 125  IWSDQNKLVHGDSISPASAKSNWIRSYLDSFRKANPRRKTNQLAHRIRASDENRPSRWLP 184
            IW+++N++ HG S  PAS    W +  L++F  AN         +  R   ++  +RW P
Sbjct: 1000 IWTNRNEVRHGKSRKPASVLVGWTKELLENFVMAN---------YSTRPFKDSVEARWQP 1059

Query: 185  PPSDYWKLNVDAACLQYASLSRLRVESIVELNSLLAINFINKNY--------VVWEDMEA 243
            P   ++K N+D A   +       +E ++  +    +  ++K          +V + ME 
Sbjct: 1060 PKPPWYKANMDGAV--FTQQKEAGIEVVIRDHHGEVVAALSKRIKAPLGAVEIVAKAMEE 1116

BLAST of Lag0042156 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.5e-30
Identity = 91/308 (29.55%), Postives = 134/308 (43.51%), Query Frame = 0

Query: 5    SASNSHMGRIWKNVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIE 64
            SAS ++ G  W ++WKL +P+KIK+F W++    +P   NL  RG+     C IC  + E
Sbjct: 1122 SASTNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRE 1181

Query: 65   NTNHCLFTCNRAQEVWNLTFQNV-FLEVDFCGSFVDRWIKLDSPLTLEELELVVVACWAI 124
            +  H  F C RA+++W   F  +  L  +   SF++ W  L   L  ++L L  +  W I
Sbjct: 1182 SIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGI 1241

Query: 125  WSDQNKLVHGDSISPASAKSNWIRSYLDSFRKANPRRKTNQLAHRIRASDENRPSRWLPP 184
            W+D+N L+HG  +SP   K  W+  +LDS  +A    + +  + R +++       W P 
Sbjct: 1242 WNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQA----QMSNYSPRTQSNHRPVVQYWRPS 1301

Query: 185  PSDYWKLNVDAAC----------LQYASLSRLRVESI----------------------- 244
             S   KLN DAAC          ++ +S S +   SI                       
Sbjct: 1302 SSVSLKLNTDAACRGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLKFA 1361

Query: 245  ---------VELNSLLAINFINKNYVVWEDMEADVARVWELTSQFLDIDFSFIPRYCNEL 270
                     VE +SLLAI  I        D +  V  +  LT  F  I FS   R CN  
Sbjct: 1362 AASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFSHSSRQCNRA 1421

BLAST of Lag0042156 vs. ExPASy TrEMBL
Match: A0A803Q2K8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 7.2e-25
Identity = 67/198 (33.84%), Postives = 102/198 (51.52%), Query Frame = 0

Query: 5    SASNSHMGRIWKNVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIE 64
            +AS+  M   W   WK+K+P K+++F WK    +LP    L  R +  S  C IC+S  E
Sbjct: 1400 TASSHSMENWWSTFWKMKLPPKVRIFVWKVFHSTLPVAAELFRRHIATSPHCSICNSAEE 1459

Query: 65   NTNHCLFTCNRAQEVWNLTFQNVFLEVDFCGSFVDRWIKLDSPLTLEELELVVVACWAIW 124
            + NH LF C RA+ VW L+  ++        +  D  + L + L+  E EL +V CW  W
Sbjct: 1460 SINHALFDCPRAKAVWELSSLHIDFHTLRQSASADILLHLSTALSTSEFELFLVLCWCNW 1519

Query: 125  SDQNKLVHGDSISPASAKSNWIRSYLDSFRKANPRRKTNQLAHRIRASDENRPS------ 184
             ++N + HG+++  + A +++  SYL  F+  N R K +Q      A+ + RPS      
Sbjct: 1520 HERNAIYHGNTVRSSQAVASYAPSYLAEFQ--NARAKRSQPTPISIAATDPRPSSEFTHA 1579

Query: 185  -RWLPPPSDYWKLNVDAA 196
             +W  PP    KLN DAA
Sbjct: 1580 PKWTAPPQGRLKLNTDAA 1595

BLAST of Lag0042156 vs. ExPASy TrEMBL
Match: A0A803P8W5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-24
Identity = 65/203 (32.02%), Postives = 105/203 (51.72%), Query Frame = 0

Query: 5    SASNSHMGRIWKNVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIE 64
            S+++S  G  WK +W LK+P K+K F W+ +  +LP  +NL +R V  SN+C +C+   E
Sbjct: 1295 SSTSSSNGNWWKRLWALKLPKKVKNFVWRVINDALPTAVNLLHRKVLQSNVCSLCNRSRE 1354

Query: 65   NTNHCLFTCNRAQEVW-NLTFQNVFLEVDFCGSFVDRWIKLDSPLTLEELELVVVACWAI 124
              +H LF C RA  VW  L F      +     F + +  L +  +  ELE ++   W+I
Sbjct: 1355 TLSHALFMCTRALHVWAQLPFFKAAPNISHLNGF-EIFSSLVAATSNSELERILCRMWSI 1414

Query: 125  WSDQNKLVHGDSISPASAKSNWIRSYLDSFRKAN-----------PRRKTNQLAHRIRAS 184
            W+++NK +HG    PAS   ++  SY+  F  ++           P+         +R +
Sbjct: 1415 WTERNKEIHGTKPKPASLIGSFADSYVQQFTNSSLQQSPSVSNSLPQHCPTSRDDNLRTT 1474

Query: 185  DENRPSRWLPPPSDYWKLNVDAA 196
             E+   +W PP + ++KLNVDAA
Sbjct: 1475 RESGTVKWTPPHAGFFKLNVDAA 1496

BLAST of Lag0042156 vs. ExPASy TrEMBL
Match: A0A803QH76 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.0e-23
Identity = 62/201 (30.85%), Postives = 105/201 (52.24%), Query Frame = 0

Query: 6    ASNSHMGRIWKNVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIEN 65
            +S+S   + W  +W L++P K+K+F W+ +  +LP  +NL +R +  S  C +C    E+
Sbjct: 1364 SSSSTNRKWWNRLWSLQLPKKVKIFAWRLVNDALPTAVNLAHRKIASSAACALCKCSWES 1423

Query: 66   TNHCLFTCNRAQEVWNLTFQNVFLEVDFCGSFVDRWIKLDSPLTLEELELVVVACWAIWS 125
              H LF C+RA+ VW+    NVF+         D +  L +     +LE++    W IWS
Sbjct: 1424 VGHALFRCHRAKLVWDKFHFNVFIPNIANIKGFDIYSHLAAAHNDNDLEIITCLLWCIWS 1483

Query: 126  DQNKLVHGDSISPASAKSNWIRSYLDSFRKANPRRK--------TNQLAHRIRASDENRP 185
            ++NK +HG    PA    ++  +YL  ++ A  ++K        +   +  + A ++ RP
Sbjct: 1484 ERNKEIHGTKPKPAPILCSFAANYLTQYKMAATQQKCASGLSSTSCNASVPVDAPEKTRP 1543

Query: 186  SRWLPPPSDYWKLNVDAACLQ 199
             +W PP    +KLNVDAAC +
Sbjct: 1544 -QWKPPDEGCYKLNVDAACTE 1563

BLAST of Lag0042156 vs. ExPASy TrEMBL
Match: A0A803Q6Z2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.0e-23
Identity = 71/217 (32.72%), Postives = 100/217 (46.08%), Query Frame = 0

Query: 15   WKNVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIENTNHCLFTCN 74
            W+  W LK+PSKI++F W+A   +LP    LQ R +  S  CP+C   +E  NH  F CN
Sbjct: 1775 WQYFWGLKLPSKIRIFAWRAYHEALPTAAILQYRHISSSPQCPLCQVHLETINHAFFWCN 1834

Query: 75   RAQEVWNLTFQNVFLEVDFCGSFVDRWIKLDSPLTLEELELVVVACWAIWSDQNKLVHGD 134
            RA++VW    +++   +    SF D  + + S L  E++EL +   W IW+ +N   H  
Sbjct: 1835 RAKQVWKNWDESINWSLSMTCSFSDFLVYVSSQLQAEKVELFLTTLWCIWTARNAETHSK 1894

Query: 135  SISPASAKSNWIRSYLDSFRKANPRRKTN----------------------QLAHRIRAS 194
            S   A     +  SYL  FRKA  + KTN                      QL+H + AS
Sbjct: 1895 SPKSALQIFQFASSYLAEFRKA--QAKTNSAGTRFQVSPATSLNSAAESSAQLSHLVAAS 1954

Query: 195  DENRPS--------------RWLPPPSDYWKLNVDAA 196
            D    +              +WL PPS   K+N DAA
Sbjct: 1955 DSAHQAFTYDPTGVLPPTKPKWLAPPSGRLKMNTDAA 1989

BLAST of Lag0042156 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-14
Identity = 74/306 (24.18%), Postives = 120/306 (39.22%), Query Frame = 0

Query: 7   SNSHMGRIWKNVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIENT 66
           S   +  I++ +WK +   KI+ F WK L  SLP    L  R +   + C  C S  E  
Sbjct: 246 SEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETV 305

Query: 67  NHCLFTCNRAQEVWNLTFQNVFLEVDFCGS-FVDRW----IKLDSPLTLEELELVVVACW 126
           NH LF C  A+  W ++   + L  ++  S +V+ +    +   +P   +  +LV    W
Sbjct: 306 NHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLW 365

Query: 127 AIWSDQNKLVHGDSISPASAKSNWIRSYLDSFRKANPRRKTNQLAHRIRASDENRPSRWL 186
            +W ++N+LV       A          L+ +R               R+S      RW 
Sbjct: 366 RLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSS----CGRWR 425

Query: 187 PPPSDYWKLNVDAA-----------------------------------------CLQYA 246
           PPP  + K N DA                                           +++A
Sbjct: 426 PPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWA 485

Query: 247 --SLSRLRVESIV-ELNSLLAINFINKNYVVWEDMEADVARVWELTSQFLDIDFSFIPRY 264
             SLSR +   ++ E +S + I  +N N  +W  ++  +  +  L SQF ++ F FIPR 
Sbjct: 486 VLSLSRFQYNYVIFESDSQVLIEILN-NDEIWPSLKPTIQDLQRLLSQFTEVKFVFIPRE 545

BLAST of Lag0042156 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-11
Identity = 48/194 (24.74%), Postives = 78/194 (40.21%), Query Frame = 0

Query: 18  VWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIENTNHCLFTCNRAQ 77
           +WKL +  KIK F W+ +  +L  N  L++R +    +C  C  + E  +H +F C   Q
Sbjct: 37  IWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQ 96

Query: 78  EVW---NLTFQNVFLEVDFCGSFVDRWIKLDSPLTLEELE--LVVVACWAIWSDQNKLVH 137
            VW   N+   N +         ++R I+L    T   L+  L     W +W  +N  + 
Sbjct: 97  SVWRSANIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDRFLPFWIMWRLWKSRNVFLF 156

Query: 138 GDSI-SPASAKSNWIRSYLDSFRKANPRRKTN-QLAHRIRASDENRPSRWLPPPSDYWKL 197
                SP       I+   +          TN  +A     +     S+W PPP  + K 
Sbjct: 157 QQKCQSPDYEARKGIQDATEWLNANETTENTNVHVATNPIQTSRRDSSQWNPPPEGWVKC 216

Query: 198 NVDAACLQYASLSR 205
           N D+   Q +  +R
Sbjct: 217 NFDSGYTQGSPYTR 230

BLAST of Lag0042156 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 7.7e-11
Identity = 51/184 (27.72%), Postives = 74/184 (40.22%), Query Frame = 0

Query: 18  VWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIENTNHCLFTCNRAQ 77
           +WKLK   KIK F WK L  +L    NL+ R +R    C  C  + E + H  F C  AQ
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77

Query: 78  EVWNLT-FQNVFLEVDFCGSFVDRWIKLDSPLTLEELELVVVA---CWAIWSDQNKLVHG 137
           +VW  +   +  L            + L S L   + +L  +A    W +W  +N+LV  
Sbjct: 78  QVWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVFQ 137

Query: 138 DSISPASAKSNWIRSYLDSFRKANPR-RKTNQLAHRIRASDENRP-SRWLPPPSDYWKLN 196
                        R+ +  +   N   +  NQ  H  R        ++W  PPS + K N
Sbjct: 138 QKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPSTWIKYN 197

BLAST of Lag0042156 vs. TAIR 10
Match: AT1G10000.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-07
Identity = 67/282 (23.76%), Postives = 110/282 (39.01%), Query Frame = 0

Query: 26  KIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIENTNHCLFTCNRAQEVWNLT-- 85
           KIKLF WKA   +LP    L  R +  +  C  C +  E + H LF C+ A +VWNL   
Sbjct: 3   KIKLFLWKAAAGALPVGAQLVRRHISSTWDCARCGAP-ETSTHMLFHCDFAAQVWNLAPL 62

Query: 86  ---FQNVFLEVDFCGSFVDRWIKLDSPLTLEELELVVVACWAIWSDQNKLVHGDS----- 145
                 +   +    + + + I L  P+ +    L    CW IW  +N+L+  +S     
Sbjct: 63  QLGHIPIGTPILEALNLLKKTIVL-PPVGIHTATLFPWICWHIWKARNQLIFQNSHFSVI 122

Query: 146 ------ISPASAKSNWIRSYLDSFRKANPR-RKTNQLAHRI--------RASDENRPSRW 205
                 +  A A  +  +  L   R A PR   T  L H          +       S W
Sbjct: 123 ETVTKAVQDALAWQS-AQLALPKVRVATPRPNSTTTLTHDFLCYVDAAWQQQSSLAGSGW 182

Query: 206 LPPPSDYWKLNV---DAACLQYAS----------------LSRLRVESIVELNSLLAINF 264
           +   + + +  +    A C ++ S                L   R + +V  +S   ++ 
Sbjct: 183 VFQATSHSEKEITTFSAGCRRFPSPLAAEAWAIKSAMLHALQLERSDLLVLSDSKSIVDA 242

BLAST of Lag0042156 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.6e-06
Identity = 25/61 (40.98%), Postives = 31/61 (50.82%), Query Frame = 0

Query: 17 NVWKLKIPSKIKLFCWKALKRSLPNNLNLQNRGVRLSNLCPICDSQIENTNHCLFTCNRA 76
          ++W LKI  KIKL  WKAL  +LP    L +R + +   C  C    E   H LF C  A
Sbjct: 8  DIWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRC-RDFETITHILFNCPFA 67

Query: 77 Q 78
          Q
Sbjct: 68 Q 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158377.11.5e-2929.55uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_030508852.11.2e-2636.32uncharacterized protein LOC115723496 [Cannabis sativa][more]
XP_030509188.11.5e-2433.84uncharacterized protein LOC115723863 [Cannabis sativa][more]
XP_030502765.12.6e-2434.85uncharacterized protein LOC115717936 [Cannabis sativa][more]
XP_030969753.13.3e-2427.82uncharacterized protein LOC115990032 [Quercus lobata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DX307.5e-3029.55uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A803Q2K87.2e-2533.84Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803P8W52.1e-2432.02Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QH764.0e-2330.85Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803Q6Z24.0e-2332.72Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G29090.12.6e-1424.18Ribonuclease H-like superfamily protein [more]
AT2G02650.12.0e-1124.74Ribonuclease H-like superfamily protein [more]
AT3G25270.17.7e-1127.72Ribonuclease H-like superfamily protein [more]
AT1G10000.11.4e-0723.76Ribonuclease H-like superfamily protein [more]
AT3G26855.12.6e-0640.98RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 10..80
e-value: 3.6E-18
score: 66.0
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 7..195
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 7..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0042156.1Lag0042156.1mRNA