Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCCTCGTTCAATTGCAAGGAAGATATTCAAGCCGAGGGCAGTAGATGAAGGAGGCTCGGCTGCCCAAAACAGAGGCAAAAAACATATGATTAAAGACCACAGCGTTTTGCAGCCTATTCCTCAGGCGCCAAAAAGAAGACAAAAAGGAAAGGCCCCAATGGAGGCCATGAGTGAAGTGCCAAGGAAATTTGTAGGCGAGGTTGCAGCCGCACATTATAAAGAGCTGAAGAACAAAGAGATAATGCTAGAAAAAGGCTTTGATGAAAATCTTGACAGCTTACCGCATATGCTGGCGGTTACAATTAGAAATCAGAATTGGCAAATCTTATGCCATCACCCCGAGCCAGCTGTCCCTAGCATTGTCAAGGAATTTTATGCAAATTTTCAAGATAACGGTGTTTGGAAAATAGTAGTGCGAGGGCAAATCGTGGAATGGAGTCCGTCTACTATTAATCAATTCTATGATATACCCGATTTCCCCTTTGCCATCTGCAATGCCATGATGATAACGCCTTCAGAAGAGCAGCTCAAGGCGACCTTGCAAAGTAAAAATAGCAACCGTTCCTTGATGTCCGCCTATGTGACTCCTGAAGCTAATGTGTGGCTTTGGTTTGCGAGGAACTGTCTTCTGCCCACCACGCACGACACCACGGTCTCAAAAGAGAGAATGCTCTTGGTTTTTCTATCATGAGTCTAATCAGTATAGATGTGGGTAGAATAATTGCAAAAGAAATCACCTCGTGTGCCCGTAAGAAAGCGGGAAAGTTATTCTTTCCTAACTTCATTACGGCTTTATGCTTAAGGGCAGGGGTGCAGTTGGAAGAAGGAGATGATCTCGCAGTCGACAAGGGAATTATAGATGCGGCGACTATCAAGCGATTAATGGGTGATGGTAAATCAAGGAAAACATCAACCGTAGCCAGCGAAATAGAAGAAATCCTTAGACAACAAAGAGAATTGTTGCAGCATGTGCAGCACCAAGGCGAGCAGCAAAGAGTTTATTGGGAATACGCATGGAAAAGAGACGAAATGGTCGAGAAGGCTTTTAACTCAAATCAAGAAGAGGCTCTACCACCTTTCCCTCCATTCCCTCATGACGTTTTAAGCCCTTGA
mRNA sequence
ATGGGTCCTCGTTCAATTGCAAGGAAGATATTCAAGCCGAGGGCAGTAGATGAAGGAGGCTCGGCTGCCCAAAACAGAGGCAAAAAACATATGATTAAAGACCACAGCGTTTTGCAGCCTATTCCTCAGGCGCCAAAAAGAAGACAAAAAGGAAAGGCCCCAATGGAGGCCATGAGTGAAGTGCCAAGGAAATTTGTAGGCGAGGTTGCAGCCGCACATTATAAAGAGCTGAAGAACAAAGAGATAATGCTAGAAAAAGGCTTTGATGAAAATCTTGACAGCTTACCGCATATGCTGGCGGTTACAATTAGAAATCAGAATTGGCAAATCTTATGCCATCACCCCGAGCCAGCTGTCCCTAGCATTGTCAAGGAATTTTATGCAAATTTTCAAGATAACGGTGTTTGGAAAATAGTAGTGCGAGGGCAAATCGTGGAATGGAGTCCGTCTACTATTAATCAATTCTATGATATACCCGATTTCCCCTTTGCCATCTGCAATGCCATGATGATAACGCCTTCAGAAGAGCAGCTCAAGGCGACCTTGCAAAGTAAAAATAGCAACCGTTCCTTGATGTCCGCCTATGTGACTCCTGAAGCTAATGTGTGGCTTTGGGCAGGGGTGCAGTTGGAAGAAGGAGATGATCTCGCAGTCGACAAGGGAATTATAGATGCGGCGACTATCAAGCGATTAATGGGTGATGGTAAATCAAGGAAAACATCAACCGTAGCCAGCGAAATAGAAGAAATCCTTAGACAACAAAGAGAATTGTTGCAGCATGTGCAGCACCAAGGCGAGCAGCAAAGAGTTTATTGGGAATACGCATGGAAAAGAGACGAAATGGTCGAGAAGGCTTTTAACTCAAATCAAGAAGAGGCTCTACCACCTTTCCCTCCATTCCCTCATGACGTTTTAAGCCCTTGA
Coding sequence (CDS)
ATGGGTCCTCGTTCAATTGCAAGGAAGATATTCAAGCCGAGGGCAGTAGATGAAGGAGGCTCGGCTGCCCAAAACAGAGGCAAAAAACATATGATTAAAGACCACAGCGTTTTGCAGCCTATTCCTCAGGCGCCAAAAAGAAGACAAAAAGGAAAGGCCCCAATGGAGGCCATGAGTGAAGTGCCAAGGAAATTTGTAGGCGAGGTTGCAGCCGCACATTATAAAGAGCTGAAGAACAAAGAGATAATGCTAGAAAAAGGCTTTGATGAAAATCTTGACAGCTTACCGCATATGCTGGCGGTTACAATTAGAAATCAGAATTGGCAAATCTTATGCCATCACCCCGAGCCAGCTGTCCCTAGCATTGTCAAGGAATTTTATGCAAATTTTCAAGATAACGGTGTTTGGAAAATAGTAGTGCGAGGGCAAATCGTGGAATGGAGTCCGTCTACTATTAATCAATTCTATGATATACCCGATTTCCCCTTTGCCATCTGCAATGCCATGATGATAACGCCTTCAGAAGAGCAGCTCAAGGCGACCTTGCAAAGTAAAAATAGCAACCGTTCCTTGATGTCCGCCTATGTGACTCCTGAAGCTAATGTGTGGCTTTGGGCAGGGGTGCAGTTGGAAGAAGGAGATGATCTCGCAGTCGACAAGGGAATTATAGATGCGGCGACTATCAAGCGATTAATGGGTGATGGTAAATCAAGGAAAACATCAACCGTAGCCAGCGAAATAGAAGAAATCCTTAGACAACAAAGAGAATTGTTGCAGCATGTGCAGCACCAAGGCGAGCAGCAAAGAGTTTATTGGGAATACGCATGGAAAAGAGACGAAATGGTCGAGAAGGCTTTTAACTCAAATCAAGAAGAGGCTCTACCACCTTTCCCTCCATTCCCTCATGACGTTTTAAGCCCTTGA
Protein sequence
MGPRSIARKIFKPRAVDEGGSAAQNRGKKHMIKDHSVLQPIPQAPKRRQKGKAPMEAMSEVPRKFVGEVAAAHYKELKNKEIMLEKGFDENLDSLPHMLAVTIRNQNWQILCHHPEPAVPSIVKEFYANFQDNGVWKIVVRGQIVEWSPSTINQFYDIPDFPFAICNAMMITPSEEQLKATLQSKNSNRSLMSAYVTPEANVWLWAGVQLEEGDDLAVDKGIIDAATIKRLMGDGKSRKTSTVASEIEEILRQQRELLQHVQHQGEQQRVYWEYAWKRDEMVEKAFNSNQEEALPPFPPFPHDVLSP
Homology
BLAST of Lag0041715 vs. NCBI nr
Match:
KAF4378427.1 (hypothetical protein F8388_021621 [Cannabis sativa])
HSP 1 Score: 75.9 bits (185), Expect = 6.9e-10
Identity = 43/117 (36.75%), Postives = 68/117 (58.12%), Query Frame = 0
Query: 62 PRKFVGEVAAAHYKE-LKNKEIMLEKGF---DENLDSLPHMLAVTIRNQNWQILCHHPEP 121
PRKF+ + A A Y++ +++KE +E+G D+N S+P L I+ + W+ LC P
Sbjct: 618 PRKFISKAAEAKYRDSVRHKEFYIERGIIVGDDNFGSMPPWLIENIKKRKWEGLCEDPAS 677
Query: 122 AVPSIVKEFYANFQDNGVW--KIVVRGQIVEWSPSTINQFYDIPDF--PFAICNAMM 171
AV +VKEFYANF + W I+VR V +S IN+F+ + + F+ CN+ +
Sbjct: 678 AVCQVVKEFYANFLAS-EWPADIIVREVKVPFSDKLINEFFQLKNITCEFSKCNSKL 733
BLAST of Lag0041715 vs. NCBI nr
Match:
PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])
HSP 1 Score: 71.6 bits (174), Expect = 1.3e-08
Identity = 50/156 (32.05%), Postives = 73/156 (46.79%), Query Frame = 0
Query: 64 KFVGEVAAAHYK-ELKNKEIMLEKGF----DENLDSLPHMLAVTIRNQNWQILCHHPEPA 123
KF E AA Y+ ++N+ + EKGF E + LP +A I NW+ C HPE
Sbjct: 24 KFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDP 83
Query: 124 VPSIVKEFYANFQDNGVWKIVVRGQIVEWSPSTINQFYDIPDFPFAICNAMMITPSEEQL 183
+ +V+EFYAN D + VRG V WS IN + + D P + + +++ L
Sbjct: 84 IVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQDL 143
Query: 184 KATLQSKNS-----NRSLMSAY------VTPEANVW 204
L++ + N S AY +TP A VW
Sbjct: 144 ITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVW 177
BLAST of Lag0041715 vs. NCBI nr
Match:
PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])
HSP 1 Score: 69.3 bits (168), Expect = 6.5e-08
Identity = 50/156 (32.05%), Postives = 70/156 (44.87%), Query Frame = 0
Query: 64 KFVGEVAAAHYK-ELKNKEIMLEKGF----DENLDSLPHMLAVTIRNQNWQILCHHPEPA 123
KF E A Y+ ++N+ + EKGF E + LP +A I NW+ C HPE
Sbjct: 15 KFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDP 74
Query: 124 VPSIVKEFYANFQDNGVWKIVVRGQIVEWSPSTINQFYDIPDFPFAICNAMMITPSEEQL 183
+ +V+EFYAN D + VRG V WS IN + + D P + + +E L
Sbjct: 75 IVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIENITEHDL 134
Query: 184 KATLQS-----KNSNRSLMSAY------VTPEANVW 204
L++ N S AY +TP A VW
Sbjct: 135 ITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVW 168
BLAST of Lag0041715 vs. NCBI nr
Match:
PON65868.1 (hypothetical protein PanWU01x14_113570 [Parasponia andersonii])
HSP 1 Score: 65.9 bits (159), Expect = 7.2e-07
Identity = 38/101 (37.62%), Postives = 52/101 (51.49%), Query Frame = 0
Query: 64 KFVGEVAAAHYKE-LKNKEIMLEKGF-DENLDSL--PHMLAVTIRNQNWQILCHHPEPAV 123
KF E A Y+E ++N+ + EKGF +N L P +A I NWQ+ C HPE +
Sbjct: 15 KFKSEAAETRYEENIQNRPLSAEKGFVGDNSKPLEKPPFIADVITQHNWQLFCAHPEDPI 74
Query: 124 PSIVKEFYANFQDNGVWKIVVRGQIVEWSPSTINQFYDIPD 161
+V+EFYAN + + VRG V S IN Y + D
Sbjct: 75 VPLVREFYANMTNPDDDTVYVRGVQVLLSSEAINTIYGLGD 115
BLAST of Lag0041715 vs. NCBI nr
Match:
WP_205755446.1 (hypothetical protein, partial [Bacillus amyloliquefaciens])
HSP 1 Score: 65.1 bits (157), Expect = 1.2e-06
Identity = 43/140 (30.71%), Postives = 70/140 (50.00%), Query Frame = 0
Query: 70 AAAHYKE---LKNKEIMLEKGFDENLDSLPHMLAVTIRNQNWQILCHHPEPAVPSIVKEF 129
AAAH++ +++ + E+ F +++ + TI NWQ C+ AV +V+EF
Sbjct: 22 AAAHFRYHEFATSRKFISEQSFYNPGEAIEN----TIVAHNWQRFCYFTAVAVIPVVREF 81
Query: 130 YANFQDNGVWKIVVRGQIVEWSPSTINQFYDIPDFPFAICNAMMITPSEEQLKATLQSKN 189
YANF D +++ VRG V ++P IN FY +P P C ++PSE L+
Sbjct: 82 YANFMDAEDYEVFVRGVGVGFTPERINIFYGLP--PTVECYYSGLSPSEGDLE------- 141
Query: 190 SNRSLMSAYVTPEANVW-LW 206
++ AY+T W +W
Sbjct: 142 ----MIIAYLTDSTGAWKIW 144
BLAST of Lag0041715 vs. ExPASy TrEMBL
Match:
A0A7J6G6G2 (Fanconi-associated nuclease OS=Cannabis sativa OX=3483 GN=F8388_021621 PE=3 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 3.3e-10
Identity = 43/117 (36.75%), Postives = 68/117 (58.12%), Query Frame = 0
Query: 62 PRKFVGEVAAAHYKE-LKNKEIMLEKGF---DENLDSLPHMLAVTIRNQNWQILCHHPEP 121
PRKF+ + A A Y++ +++KE +E+G D+N S+P L I+ + W+ LC P
Sbjct: 618 PRKFISKAAEAKYRDSVRHKEFYIERGIIVGDDNFGSMPPWLIENIKKRKWEGLCEDPAS 677
Query: 122 AVPSIVKEFYANFQDNGVW--KIVVRGQIVEWSPSTINQFYDIPDF--PFAICNAMM 171
AV +VKEFYANF + W I+VR V +S IN+F+ + + F+ CN+ +
Sbjct: 678 AVCQVVKEFYANFLAS-EWPADIIVREVKVPFSDKLINEFFQLKNITCEFSKCNSKL 733
BLAST of Lag0041715 vs. ExPASy TrEMBL
Match:
A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)
HSP 1 Score: 71.6 bits (174), Expect = 6.3e-09
Identity = 50/156 (32.05%), Postives = 73/156 (46.79%), Query Frame = 0
Query: 64 KFVGEVAAAHYK-ELKNKEIMLEKGF----DENLDSLPHMLAVTIRNQNWQILCHHPEPA 123
KF E AA Y+ ++N+ + EKGF E + LP +A I NW+ C HPE
Sbjct: 24 KFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDP 83
Query: 124 VPSIVKEFYANFQDNGVWKIVVRGQIVEWSPSTINQFYDIPDFPFAICNAMMITPSEEQL 183
+ +V+EFYAN D + VRG V WS IN + + D P + + +++ L
Sbjct: 84 IVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQDL 143
Query: 184 KATLQSKNS-----NRSLMSAY------VTPEANVW 204
L++ + N S AY +TP A VW
Sbjct: 144 ITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVW 177
BLAST of Lag0041715 vs. ExPASy TrEMBL
Match:
A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)
HSP 1 Score: 69.3 bits (168), Expect = 3.1e-08
Identity = 50/156 (32.05%), Postives = 70/156 (44.87%), Query Frame = 0
Query: 64 KFVGEVAAAHYK-ELKNKEIMLEKGF----DENLDSLPHMLAVTIRNQNWQILCHHPEPA 123
KF E A Y+ ++N+ + EKGF E + LP +A I NW+ C HPE
Sbjct: 15 KFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDP 74
Query: 124 VPSIVKEFYANFQDNGVWKIVVRGQIVEWSPSTINQFYDIPDFPFAICNAMMITPSEEQL 183
+ +V+EFYAN D + VRG V WS IN + + D P + + +E L
Sbjct: 75 IVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIENITEHDL 134
Query: 184 KATLQS-----KNSNRSLMSAY------VTPEANVW 204
L++ N S AY +TP A VW
Sbjct: 135 ITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVW 168
BLAST of Lag0041715 vs. ExPASy TrEMBL
Match:
A0A2P5CXV1 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_113570 PE=4 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 3.5e-07
Identity = 38/101 (37.62%), Postives = 52/101 (51.49%), Query Frame = 0
Query: 64 KFVGEVAAAHYKE-LKNKEIMLEKGF-DENLDSL--PHMLAVTIRNQNWQILCHHPEPAV 123
KF E A Y+E ++N+ + EKGF +N L P +A I NWQ+ C HPE +
Sbjct: 15 KFKSEAAETRYEENIQNRPLSAEKGFVGDNSKPLEKPPFIADVITQHNWQLFCAHPEDPI 74
Query: 124 PSIVKEFYANFQDNGVWKIVVRGQIVEWSPSTINQFYDIPD 161
+V+EFYAN + + VRG V S IN Y + D
Sbjct: 75 VPLVREFYANMTNPDDDTVYVRGVQVLLSSEAINTIYGLGD 115
BLAST of Lag0041715 vs. ExPASy TrEMBL
Match:
A0A2G9G807 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26059 PE=4 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 1.0e-06
Identity = 49/172 (28.49%), Postives = 78/172 (45.35%), Query Frame = 0
Query: 44 APKRRQKGKAPMEAMSEVPRKFVGEVAAAHYKE-LKNKEIMLEKGFDENLDSLPHMLAVT 103
APK ++ K ++ + +FV + A Y L K + E+GF+ ++ + T
Sbjct: 2 APKNKRARKDSSDSRDK--GRFVSKSAEERYHSGLVGKVAIAERGFETKGEAYYEHIYHT 61
Query: 104 IRNQNWQILCHHPEPAVPSIVKEFYANFQDNGVWKIVVRGQIVEWSPSTINQFYDIPDFP 163
+R + W+ PE V +V+EFYAN ++ K +VRG+ V + TIN+ Y+IP
Sbjct: 62 VRERKWKTFIASPESGVLPLVREFYANAAEHKNLKCLVRGREVPFDSVTINELYNIPPIE 121
Query: 164 F-AICNAMMITPSEEQLKATL--------QSKNSNRSLMSAYVTPEANVWLW 206
A N E+L TL +K S S + A +WLW
Sbjct: 122 LDAFENFCENGIDYEELTRTLCPHGAQWKMTKGEYVSFKSNCLDKAAKIWLW 171
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAF4378427.1 | 6.9e-10 | 36.75 | hypothetical protein F8388_021621 [Cannabis sativa] | [more] |
PON46472.1 | 1.3e-08 | 32.05 | hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii] | [more] |
PON35554.1 | 6.5e-08 | 32.05 | hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii] | [more] |
PON65868.1 | 7.2e-07 | 37.62 | hypothetical protein PanWU01x14_113570 [Parasponia andersonii] | [more] |
WP_205755446.1 | 1.2e-06 | 30.71 | hypothetical protein, partial [Bacillus amyloliquefaciens] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A7J6G6G2 | 3.3e-10 | 36.75 | Fanconi-associated nuclease OS=Cannabis sativa OX=3483 GN=F8388_021621 PE=3 SV=1 | [more] |
A0A2P5BCG4 | 6.3e-09 | 32.05 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A2P5AGA5 | 3.1e-08 | 32.05 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A2P5CXV1 | 3.5e-07 | 37.62 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_113570 PE... | [more] |
A0A2G9G807 | 1.0e-06 | 28.49 | Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26059 P... | [more] |
Match Name | E-value | Identity | Description | |