Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCAAAGAAAGCTCCCGCGAAG GTTACCACATCAAGCGACTCTTACACTGGTCCTGTCACTCGTAGTCGCTCCCAAGGAATTGAGATCAAGGAGGATCATACTCCTCTGCTGTTGCAAGCAAGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAACCCACTGTTCGAATCTGTCGTTCCAACATCTAAGCAGCCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGGAAACTCAATCTCTTAATGAAGGCAGTTGATGAGAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGCAAACCGAGAAGGCTGAGTCTAGCCAGACCCCTGCTGCAGGAAAGAATGATAAGGGAAGGCTGTCATCGTGA mRNA sequence
ATGGCACCAAAGAAAGCTCCCGCGAAGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAACCCACTGTTCGAATCTGTCGTTCCAACATCTAAGCAGCCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGGAAACTCAATCTCTTAATGAAGGCAGTTGATGAGAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGCAAACCGAGAAGGCTGAGTCTAGCCAGACCCCTGCTGCAGGAAAGAATGATAAGGGAAGGCTGTCATCGTGA Coding sequence (CDS)
ATGGCACCAAAGAAAGCTCCCGCGAAGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAACCCACTGTTCGAATCTGTCGTTCCAACATCTAAGCAGCCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGGAAACTCAATCTCTTAATGAAGGCAGTTGATGAGAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGCAAACCGAGAAGGCTGAGTCTAGCCAGACCCCTGCTGCAGGAAAGAATGATAAGGGAAGGCTGTCATCGTGA Protein sequence
MAPKKAPAKISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQTEKAESSQTPAAGKNDKGRLSS
Homology
BLAST of Lag0041470 vs. NCBI nr
Match:
XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus])
HSP 1 Score: 92.0 bits (227), Expect = 3.4e-15
Identity = 57/102 (55.88%), Postives = 69/102 (67.65%), Query Frame = 0
Query: 10 ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKL 69 I K + ES K + +K+NPL+ S + +PDVMSVMMADV + MAEMERK+ Sbjct: 43 ILKQLMESPKAGIVIKENPLYNDYDSASSRSLKEAHPDVMSVMMADVAVETAMAEMERKI 102 Query: 70 NLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDKGR 111 NLLMK VDERD EIA LK Q+QT E AESSQTP +DKG+ Sbjct: 103 NLLMKVVDERDHEIAALKEQMQTRETAESSQTPVVKVDDKGK 144
BLAST of Lag0041470 vs. NCBI nr
Match:
XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus])
HSP 1 Score: 92.0 bits (227), Expect = 3.4e-15
Identity = 57/102 (55.88%), Postives = 69/102 (67.65%), Query Frame = 0
Query: 10 ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKL 69 I K + ES K + +K+NPL+ S + +PDVMSVMMADV + MAEMERK+ Sbjct: 43 ILKQLMESPKAGIVIKENPLYNDYDSASSRSLKEAHPDVMSVMMADVAVETAMAEMERKI 102 Query: 70 NLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDKGR 111 NLLMK VDERD EIA LK Q+QT E AESSQTP +DKG+ Sbjct: 103 NLLMKVVDERDHEIAALKEQMQTRETAESSQTPVVKVDDKGK 144
BLAST of Lag0041470 vs. NCBI nr
Match:
XP_031742199.1 (uncharacterized protein LOC105435721 [Cucumis sativus])
HSP 1 Score: 92.0 bits (227), Expect = 3.4e-15
Identity = 57/102 (55.88%), Postives = 69/102 (67.65%), Query Frame = 0
Query: 10 ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKL 69 I K + ES K + +K+NPL+ S + +PDVMSVMMADV + MAEMERK+ Sbjct: 43 ILKQLMESPKAGIVIKENPLYNDYDSASSRSLKEAHPDVMSVMMADVAVETAMAEMERKI 102 Query: 70 NLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDKGR 111 NLLMK VDERD EIA LK Q+QT E AESSQTP +DKG+ Sbjct: 103 NLLMKVVDERDHEIAALKEQMQTRETAESSQTPVVKVDDKGK 144
BLAST of Lag0041470 vs. NCBI nr
Match:
XP_031735972.1 (uncharacterized protein LOC116401693 [Cucumis sativus])
HSP 1 Score: 92.0 bits (227), Expect = 3.4e-15
Identity = 57/102 (55.88%), Postives = 69/102 (67.65%), Query Frame = 0
Query: 10 ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKL 69 I K + ES K + +K+NPL+ S + +PDVMSVMMADV + MAEMERK+ Sbjct: 43 ILKQLMESPKAGIVIKENPLYNDYDSASSRSLKEAHPDVMSVMMADVAVETAMAEMERKI 102 Query: 70 NLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDKGR 111 NLLMK VDERD EIA LK Q+QT E AESSQTP +DKG+ Sbjct: 103 NLLMKVVDERDHEIAALKEQMQTRETAESSQTPVVKVDDKGK 144
BLAST of Lag0041470 vs. NCBI nr
Match:
XP_031737053.1 (uncharacterized protein LOC116402138 [Cucumis sativus])
HSP 1 Score: 92.0 bits (227), Expect = 3.4e-15
Identity = 57/102 (55.88%), Postives = 69/102 (67.65%), Query Frame = 0
Query: 10 ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKL 69 I K + ES K + +K+NPL+ S + +PDVMSVMMADV + MAEMERK+ Sbjct: 43 ILKQLMESPKAGIVIKENPLYNDYDSASSRSLKEAHPDVMSVMMADVAVETAMAEMERKI 102 Query: 70 NLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDKGR 111 NLLMK VDERD EIA LK Q+QT E AESSQTP +DKG+ Sbjct: 103 NLLMKVVDERDHEIAALKEQMQTRETAESSQTPVVKVDDKGK 144
The following BLAST results are available for this feature:
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G G C A C C A A A G A A A G C T C C C G C G A A G A T C T C A A A G T T G A T T G A A G A A T C C T C T A A G G A T A A G G T T G C A G T C A A A G A C A A C C C A C T G T T C G A A T C T G T C G T T C C A A C A T C T A A G C A G C C A A A G G A T A C A C T A A A T C C T G A T G T G A T G T C C G T C A T G A T G G C T G A T G T A G A C C A G G A T G A A A G A A T G G C A G A G A T G G A A A G G A A A C T C A A T C T C T T A A T G A A G G C A G T T G A T G A G A G A G A T C T T G A G A T T G C C T A T T T G A A G A A C C A G C T G C A A A C C G A G A A G G C T G A G T C T A G C C A G A C C C C T G C T G C A G G A A A G A A T G A T A A G G G A A G G C T G T C A T C G T G A 50 100 150 200 250 300 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 90..113
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 90..107
Relationships
The following mRNA feature(s) are a part of this gene: