Lag0039674 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0039674
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Exocyst subunit Exo70 family protein
Location	chr2: 48150287 .. 48151545 (-)
RNA-Seq Expression	Lag0039674
Synteny	Lag0039674

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGGTTACAAATGCAAAGTGTAGGTAAATTGATAATTTAAGTGTCTTTCGATAACCATTTTATTTCCTTTTTTGATTTTTGGTTTTGAAAAGCACCTTGATAACTAATTCAATTTTCAACTTTCTTTTCTATGAACGTTCTTTAAATTAGAAAGTTTGTAAAAATAAATTTCGATTTCTTAAAAACTCATTTGCTATCCTTCATTCTCTTCAACAAGTTTCTCTCTTTAACTTTTTTCTTCCTAAAAATTTGTTGTCTCTAAGTTTCTCTGCTTAAAAGAATAAGGACAATTGTAATGGGTGGCAAAATTATGGTGCATAATAGCAAATATAGCAAGTTTTTAAAATAATTACAAATATGACAAAGTTTTTAAATGAATTTTTTATATTCCCGAATTGCCCTTGATTGGCGCGCGCATCTTCTGCTTCCTCATCTATAAAATCTATATAGAAATTTTTTCTATCATTGATAAATTCTATCAGTGGTAGCAAAATTTTCTATCAAAATGATAGAAAGTTTCTATTAGTGATATAAGAAAGTTTCTATCACTAATAGAAAAATTTTCTATCACTGATAGAATATCTTTCTATACTGATAGAATCTATCACTGATAGAAAAACTTTCTATCACTGATAGAAGATCTCTATCACTAATAGAATATCTTTCTATCACTGGTAGAATCTATCAATGATAGAATGTTTTTCTATCATTGATAGAAACACAACAACAACCAAATATCAATAATAGAAACACAACAACAATCAAATATCAGTGATAGAAACACAACAACAACCAAACACCTTGTTGAAAACCTAACAAAAAACAACCTAACTGATTGAAATCGAAGAAAAAAGAAAAAGAGGCGAAGGTGAAGCAGTATGGATGGAGCTACCAATGTATGGGATGGAGCAGAGTGTTCCTATCCCTGTAGGAGAATCAGACGGCGGAGATTTTGCCGGAGAGAGCAAGAAAACACTTCAACGATTTCAACATTGCATTCGAAGAAGCCTACATGCATCAAGCCTTGTGGATCGTGACAGATCCGAAGCTGTGTGAGCACATCAAGATCTCGTTGGGGAAGAAACTCGGCACGTTCCACGGTGAGTTCTGCATCAAATACCGTTCGCGATTGGAGAATCTTTACGGATTGGATTTGGAGGTGAGATTCGCACCTGATGATTTGGGGAACTATCTTTCTGATTTCCTTCACGACGATGAGAGTTTAATTACTGATAGAAAATCTTTCAAACCCTGA

mRNA sequence

ATGGAGAATCAGACGGCGGAGATTTTGCCGGAGAGAGCAAGAAAACACTTCAACGATTTCAACATTGCATTCGAAGAAGCCTACATGCATCAAGCCTTGTGGATCGTGACAGATCCGAAGCTGTGTGAGCACATCAAGATCTCGTTGGGGAAGAAACTCGGCACGTTCCACGGTGAGTTCTGCATCAAATACCGTTCGCGATTGGAGAATCTTTACGGATTGGATTTGGAGGTGAGATTCGCACCTGATGATTTGGGGAACTATCTTTCTGATTTCCTTCACGACGATGAGAGTTTAATTACTGATAGAAAATCTTTCAAACCCTGA

Coding sequence (CDS)

ATGGAGAATCAGACGGCGGAGATTTTGCCGGAGAGAGCAAGAAAACACTTCAACGATTTCAACATTGCATTCGAAGAAGCCTACATGCATCAAGCCTTGTGGATCGTGACAGATCCGAAGCTGTGTGAGCACATCAAGATCTCGTTGGGGAAGAAACTCGGCACGTTCCACGGTGAGTTCTGCATCAAATACCGTTCGCGATTGGAGAATCTTTACGGATTGGATTTGGAGGTGAGATTCGCACCTGATGATTTGGGGAACTATCTTTCTGATTTCCTTCACGACGATGAGAGTTTAATTACTGATAGAAAATCTTTCAAACCCTGA

Protein sequence

MENQTAEILPERARKHFNDFNIAFEEAYMHQALWIVTDPKLCEHIKISLGKKLGTFHGEFCIKYRSRLENLYGLDLEVRFAPDDLGNYLSDFLHDDESLITDRKSFKP

Homology

[Close]

BLAST of Lag0039674 vs. NCBI nr
Match: XP_022948393.1 (exocyst complex component EXO70H1-like [Cucurbita moschata])

HSP 1 Score: 167.9 bits (424), Expect = 4.7e-38
Identity = 81/98 (82.65%), Postives = 85/98 (86.73%), Query Frame = 0


Query: 2   ENQTAEILPERARKHFNDFNIAFEEAYMHQALWIVTDPKLCEHIKISLGKKLGTFHGEFC 61
           EN TA+I PERARKHF+DFNIAFEEAY HQA WIVTD KL EHIKISLGKKLGT +GEF 
Sbjct: 515 ENPTADISPERARKHFHDFNIAFEEAYRHQASWIVTDSKLREHIKISLGKKLGTLYGEFY 574

Query: 62  IKYRSRLENLYGLDLEVRFAPDDLGNYLSDFLHDDESL 100
           IKYRSRLENLYG D EVRFAPDDLGNYLSD LH D +L
Sbjct: 575 IKYRSRLENLYGCDSEVRFAPDDLGNYLSDLLHGDGNL 612

[Close]

BLAST of Lag0039674 vs. NCBI nr
Match: KAG6607205.1 (Exocyst complex component EXO70H1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167.2 bits (422), Expect = 8.0e-38
Identity = 80/98 (81.63%), Postives = 85/98 (86.73%), Query Frame = 0


Query: 2   ENQTAEILPERARKHFNDFNIAFEEAYMHQALWIVTDPKLCEHIKISLGKKLGTFHGEFC 61
           EN TA+I PERARKHF+DFNIAFEEAY HQA WIVTD KL EHIKISLGKKLGT +GEF 
Sbjct: 515 ENPTADISPERARKHFHDFNIAFEEAYRHQASWIVTDSKLREHIKISLGKKLGTLYGEFY 574

Query: 62  IKYRSRLENLYGLDLEVRFAPDDLGNYLSDFLHDDESL 100
           +KYRSRLENLYG D EVRFAPDDLGNYLSD LH D +L
Sbjct: 575 LKYRSRLENLYGCDSEVRFAPDDLGNYLSDLLHGDGNL 612

[Close]

BLAST of Lag0039674 vs. NCBI nr
Match: XP_023522924.1 (exocyst complex component EXO70H1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164.1 bits (414), Expect = 6.8e-37
Identity = 79/98 (80.61%), Postives = 84/98 (85.71%), Query Frame = 0


Query: 2   ENQTAEILPERARKHFNDFNIAFEEAYMHQALWIVTDPKLCEHIKISLGKKLGTFHGEFC 61
           EN TA+I PERARKHF+DFNIAFEEAY HQA WIVTD KL EHIKISLGK LGT +GEF 
Sbjct: 515 ENPTADISPERARKHFHDFNIAFEEAYRHQASWIVTDSKLREHIKISLGKNLGTLYGEFY 574

Query: 62  IKYRSRLENLYGLDLEVRFAPDDLGNYLSDFLHDDESL 100
           IK+RSRLENLYG D EVRFAPDDLGNYLSD LH D +L
Sbjct: 575 IKHRSRLENLYGCDSEVRFAPDDLGNYLSDLLHGDGNL 612

[Close]

BLAST of Lag0039674 vs. NCBI nr
Match: XP_022998663.1 (exocyst complex component EXO70H1-like [Cucurbita maxima])

HSP 1 Score: 164.1 bits (414), Expect = 6.8e-37
Identity = 79/98 (80.61%), Postives = 84/98 (85.71%), Query Frame = 0


Query: 2   ENQTAEILPERARKHFNDFNIAFEEAYMHQALWIVTDPKLCEHIKISLGKKLGTFHGEFC 61
           EN TA+I PERARKHF+DFNIAFEEAY HQA WIVTD KL EHIKISLGKKLGT +GEF 
Sbjct: 515 ENPTADISPERARKHFHDFNIAFEEAYRHQASWIVTDSKLREHIKISLGKKLGTLYGEFY 574

Query: 62  IKYRSRLENLYGLDLEVRFAPDDLGNYLSDFLHDDESL 100
           IKYRSRLE L+G D EVRFAPDDLGNYLSD LH D +L
Sbjct: 575 IKYRSRLEKLFGCDSEVRFAPDDLGNYLSDLLHGDGNL 612

[Close]

BLAST of Lag0039674 vs. NCBI nr
Match: XP_038894877.1 (exocyst complex component EXO70H1-like [Benincasa hispida])

HSP 1 Score: 163.7 bits (413), Expect = 8.9e-37
Identity = 78/95 (82.11%), Postives = 83/95 (87.37%), Query Frame = 0


Query: 2   ENQTAEILPERARKHFNDFNIAFEEAYMHQALWIVTDPKLCEHIKISLGKKLGTFHGEFC 61
           EN TA+I PERARKHF+DFNIAFEEAY HQA WIVTD +L EHIKISLGKKLGT +GEF 
Sbjct: 501 ENPTADISPERARKHFHDFNIAFEEAYRHQASWIVTDSRLREHIKISLGKKLGTLYGEFY 560

Query: 62  IKYRSRLENLYGLDLEVRFAPDDLGNYLSDFLHDD 97
           +KYRSRLENLYG D EVRFAPDDLGNYLSD LH D
Sbjct: 561 MKYRSRLENLYGSDSEVRFAPDDLGNYLSDLLHGD 595

[Close]

BLAST of Lag0039674 vs. ExPASy Swiss-Prot
Match: Q8VY27 (Exocyst complex component EXO70H1 OS=Arabidopsis thaliana OX=3702 GN=EXO70H1 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-13
Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 1   MENQTAEILPERARKHFNDFNIAFEEAYMHQALWIVTDPKLCEHIKISLGKKLGTFHGEF 60
           +  +  ++ PE A+ +F  F+ AFEEAYM Q+  +V + KL + +K+S+ KKL   + EF
Sbjct: 516 LPEEPTDLSPEEAKIYFRRFHTAFEEAYMKQSSRVVPNAKLRDELKVSIAKKLVPEYREF 575

Query: 61  CIKYRSRLENLYGLDLEVRFAPDDLGNYLSDFLH 95
             KY   L     +++ VRF PD+L NY+SD  H
Sbjct: 576 YRKYLPMLGQERNIEILVRFKPDNLENYISDLFH 609

The following BLAST results are available for this feature:

BLAST of Lag0039674 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948393.1	4.7e-38	82.65	exocyst complex component EXO70H1-like [Cucurbita moschata]	[more]
KAG6607205.1	8.0e-38	81.63	Exocyst complex component EXO70H1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023522924.1	6.8e-37	80.61	exocyst complex component EXO70H1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998663.1	6.8e-37	80.61	exocyst complex component EXO70H1-like [Cucurbita maxima]	[more]
XP_038894877.1	8.9e-37	82.11	exocyst complex component EXO70H1-like [Benincasa hispida]	[more]

BLAST of Lag0039674 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VY27	1.4e-13	39.36	Exocyst complex component EXO70H1 OS=Arabidopsis thaliana OX=3702 GN=EXO70H1 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004140	Exocyst complex component Exo70	PFAM	PF03081	Exo70	coord: 11..91 e-value: 7.5E-11 score: 41.7
IPR004140	Exocyst complex component Exo70	PANTHER	PTHR12542	EXOCYST COMPLEX PROTEIN EXO70	coord: 4..99
None	No IPR available	GENE3D	1.20.1280.170	Exocyst complex component Exo70	coord: 2..100 e-value: 2.8E-13 score: 51.4
None	No IPR available	PANTHER	PTHR12542:SF141	EXOCYST SUBUNIT EXO70 FAMILY PROTEIN	coord: 4..99
IPR016159	Cullin repeat-like-containing domain superfamily	SUPERFAMILY	74788	Cullin repeat-like	coord: 11..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0039674.1	Lag0039674.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006887	exocytosis
biological_process	GO:0015031	protein transport
cellular_component	GO:0000145	exocyst