Lag0039492 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTTGGAAAGTCACTAACCGAGAATCTTGATGAGTTCAAAAAGATGACATCCGAGTTCAGGAATCTTGGAGAGAAGATAGGGGATGATAACAAGCCTTTTGTTCTATTAAATTCACTTCCTGATGCTTATAAGGAAGTGAAGACTGCCCTCAAATATGGAAGAGAGTCCATTACTACTTATGCTATTATATCAGCTATCAGAACCAAGGAATTGAAGTTGTTGTCTATAAAGAAAGAGGCTACTAAGGGTTTGTTTGTCAAAGGTACAACCAGAAATAAAGAGGGGAAAAATCAGTCAGATGATAAGGGCAATACCAAGGTTAAGTGCAACTACTGTTATAAGGAGGGGCATATCAAGAGGGAATGTTATTCTTTAAAAAGGAAGAACCAAAACTAG ATGGATGTTGGAAAGTCACTAACCGAGAATCTTGATGAGTTCAAAAAGATGACATCCGAGTTCAGGAATCTTGGAGAGAAGATAGGGGATGATAACAAGCCTTTTGTTCTATTAAATTCACTTCCTGATGCTTATAAGGAAGTGAAGACTGCCCTCAAATATGGAAGAGAGTCCATTACTACTTATGCTATTATATCAGCTATCAGAACCAAGGAATTGAAGTTGTTGTCTATAAAGAAAGAGGCTACTAAGGGTTTGTTTGTCAAAGGTACAACCAGAAATAAAGAGGGGAAAAATCAGTCAGATGATAAGGGCAATACCAAGGTTAAGTGCAACTACTGTTATAAGGAGGGGCATATCAAGAGGGAATGTTATTCTTTAAAAAGGAAGAACCAAAACTAG ATGGATGTTGGAAAGTCACTAACCGAGAATCTTGATGAGTTCAAAAAGATGACATCCGAGTTCAGGAATCTTGGAGAGAAGATAGGGGATGATAACAAGCCTTTTGTTCTATTAAATTCACTTCCTGATGCTTATAAGGAAGTGAAGACTGCCCTCAAATATGGAAGAGAGTCCATTACTACTTATGCTATTATATCAGCTATCAGAACCAAGGAATTGAAGTTGTTGTCTATAAAGAAAGAGGCTACTAAGGGTTTGTTTGTCAAAGGTACAACCAGAAATAAAGAGGGGAAAAATCAGTCAGATGATAAGGGCAATACCAAGGTTAAGTGCAACTACTGTTATAAGGAGGGGCATATCAAGAGGGAATGTTATTCTTTAAAAAGGAAGAACCAAAACTAG MDVGKSLTENLDEFKKMTSEFRNLGEKIGDDNKPFVLLNSLPDAYKEVKTALKYGRESITTYAIISAIRTKELKLLSIKKEATKGLFVKGTTRNKEGKNQSDDKGNTKVKCNYCYKEGHIKRECYSLKRKNQN Homology
BLAST of Lag0039492 vs. NCBI nr
Match: XP_038885928.1 (uncharacterized protein LOC120076236 [Benincasa hispida]) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-23 Identity = 64/132 (48.48%), Postives = 92/132 (69.70%), Query Frame = 0
BLAST of Lag0039492 vs. NCBI nr
Match: KAA0065687.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK08214.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 112.5 bits (280), Expect = 2.9e-21 Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 0
BLAST of Lag0039492 vs. NCBI nr
Match: XP_022152111.1 (uncharacterized protein LOC111019900 [Momordica charantia]) HSP 1 Score: 110.2 bits (274), Expect = 1.4e-20 Identity = 52/75 (69.33%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of Lag0039492 vs. NCBI nr
Match: TYK27723.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 110.2 bits (274), Expect = 1.4e-20 Identity = 58/128 (45.31%), Postives = 83/128 (64.84%), Query Frame = 0
BLAST of Lag0039492 vs. NCBI nr
Match: KAA0043826.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 109.8 bits (273), Expect = 1.9e-20 Identity = 55/128 (42.97%), Postives = 85/128 (66.41%), Query Frame = 0
BLAST of Lag0039492 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 3.2e-07 Identity = 36/135 (26.67%), Postives = 69/135 (51.11%), Query Frame = 0
BLAST of Lag0039492 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 52.8 bits (125), Expect = 3.6e-06 Identity = 39/138 (28.26%), Postives = 70/138 (50.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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