Lag0039422 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGCAGATCAATATGCGATGGATCTGGGTTTTACTTCGGTGAATTGCTCCAAGAACCAGAAATGCATCGATTCAAATAAGAGATTCAATGGAGTCATTAACTCCACCTCTGAGGCCATCAGCCTCTCTCATACTACCTACTGCGTAACTCAAATGAGACCTTTAGTCTCTCCTTCTACACCGTCTTCATCTCAACAGGGATCTTCAATCCCCACAACCTTTGTCGATGCAGTCAATCCACCAAAAAGATTCGTTCCAAAACCCGAAATAAAAACTTATTTTGAAAAACCTTCCAATTTCAGAACCAATAGTCGAACCCGAATTTGA ATGAGCGCAGATCAATATGCGATGGATCTGGGTTTTACTTCGGTGAATTGCTCCAAGAACCAGAAATGCATCGATTCAAATAAGAGATTCAATGGAGTCATTAACTCCACCTCTGAGGCCATCAGCCTCTCTCATACTACCTACTGCGTAACTCAAATGAGACCTTTAGTCTCTCCTTCTACACCGTCTTCATCTCAACAGGGATCTTCAATCCCCACAACCTTTGTCGATGCAGTCAATCCACCAAAAAGATTCGTTCCAAAACCCGAAATAAAAACTTATTTTGAAAAACCTTCCAATTTCAGAACCAATAGTCGAACCCGAATTTGA ATGAGCGCAGATCAATATGCGATGGATCTGGGTTTTACTTCGGTGAATTGCTCCAAGAACCAGAAATGCATCGATTCAAATAAGAGATTCAATGGAGTCATTAACTCCACCTCTGAGGCCATCAGCCTCTCTCATACTACCTACTGCGTAACTCAAATGAGACCTTTAGTCTCTCCTTCTACACCGTCTTCATCTCAACAGGGATCTTCAATCCCCACAACCTTTGTCGATGCAGTCAATCCACCAAAAAGATTCGTTCCAAAACCCGAAATAAAAACTTATTTTGAAAAACCTTCCAATTTCAGAACCAATAGTCGAACCCGAATTTGA MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTSEAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEKPSNFRTNSRTRI Homology
BLAST of Lag0039422 vs. NCBI nr
Match: KAA0066384.1 (hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa] >TYK00900.1 hypothetical protein E5676_scaffold602G00610 [Cucumis melo var. makuwa]) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-10 Identity = 45/98 (45.92%), Postives = 67/98 (68.37%), Query Frame = 0
BLAST of Lag0039422 vs. NCBI nr
Match: KAA0043136.1 (putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative Retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 72.8 bits (177), Expect = 2.1e-09 Identity = 47/105 (44.76%), Postives = 65/105 (61.90%), Query Frame = 0
BLAST of Lag0039422 vs. NCBI nr
Match: TYK11076.1 (hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]) HSP 1 Score: 72.8 bits (177), Expect = 2.1e-09 Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = 0
BLAST of Lag0039422 vs. NCBI nr
Match: KAA0066421.1 (hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa] >TYK00863.1 hypothetical protein E5676_scaffold602G00180 [Cucumis melo var. makuwa]) HSP 1 Score: 72.0 bits (175), Expect = 3.5e-09 Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0
BLAST of Lag0039422 vs. NCBI nr
Match: KAA0056175.1 (hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]) HSP 1 Score: 70.5 bits (171), Expect = 1.0e-08 Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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