Lag0039259 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0039259
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr2: 40099665 .. 40100810 (+)
RNA-Seq ExpressionLag0039259
SyntenyLag0039259
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGCTTCGGAGCTGGGATGCTCGGCCTCGGCCTTGGCATGAGGCCGAGCATTTATTCTGCTTTGCTTGCCAATTTGCTCTGTTGTATCCATCCCGACGGTGCGTACACTCAGTCAGGGGAAACTTGGGGAGGCCTAGGAAATTCTCAGGCCCCTCTTCAAGTATTGCATTCGTCCCAGGGGTGCGTGCACTCTACTGGGGAAAAAGCTTGGGGAGGCCTAGGAAGCTCCCGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTGTGGGGAAAAGCTTGGGAAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTATTGGGAAAGGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGAGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATTCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATTGTCATCCCAGGGATGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCCAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGAGTGCATACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAGTTCCTGGGCCTCTCTTCAAGTTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGAGCCTCTCTTCAAGCTGTTGTATTCATCCCGACGGTGTGTACACTCAATCGGGGGAGGTACGGAAGTCTGGCCTCTACAAGGATCATTCCTGTCTGGCCACTAGTGTTACATCCTATGGAAAAAGCACTTTATGCAAAACAGAATGCAAAGAACTTCATTAA

mRNA sequence

ATGGTTGGCTTCGGAGCTGGGATGCTCGGCCTCGGCCTTGGCATGAGGCCGAGCATTTATTCTGCTTTGCTTGCCAATTTGCTCTGTTGTATCCATCCCGACGGTGCGTACACTCAGTCAGGGGAAACTTGGGGAGGCCTAGGAAATTCTCAGGCCCCTCTTCAAGTATTGCATTCGTCCCAGGGGTGCGTGCACTCTACTGGGGAAAAAGCTTGGGGAGGCCTAGGAAGCTCCCGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTGTGGGGAAAAGCTTGGGAAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTATTGGGAAAGGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGAGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATTCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATTGTCATCCCAGGGATGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCCAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGAGTGCATACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAGTTCCTGGGCCTCTCTTCAAGTTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGAGCCTCTCTTCAAGCTGTTGTATTCATCCCGACGGTGTGTACACTCAATCGGGGGAGGTACGGAAGTCTGGCCTCTACAAGGATCATTCCTGTCTGGCCACTAGTGTTACATCCTATGGAAAAAGCACTTTATGCAAAACAGAATGCAAAGAACTTCATTAA

Coding sequence (CDS)

ATGGTTGGCTTCGGAGCTGGGATGCTCGGCCTCGGCCTTGGCATGAGGCCGAGCATTTATTCTGCTTTGCTTGCCAATTTGCTCTGTTGTATCCATCCCGACGGTGCGTACACTCAGTCAGGGGAAACTTGGGGAGGCCTAGGAAATTCTCAGGCCCCTCTTCAAGTATTGCATTCGTCCCAGGGGTGCGTGCACTCTACTGGGGAAAAAGCTTGGGGAGGCCTAGGAAGCTCCCGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTGTGGGGAAAAGCTTGGGAAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTATTGGGAAAGGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGAGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATTCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATTGTCATCCCAGGGATGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCCAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGAGTGCATACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAGTTCCTGGGCCTCTCTTCAAGTTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGAGCCTCTCTTCAAGCTGTTGTATTCATCCCGACGGTGTGTACACTCAATCGGGGGAGGTACGGAAGTCTGGCCTCTACAAGGATCATTCCTGTCTGGCCACTAGTGTTACATCCTATGGAAAAAGCACTTTATGCAAAACAGAATGCAAAGAACTTCATTAA

Protein sequence

MVGFGAGMLGLGLGMRPSIYSALLANLLCCIHPDGAYTQSGETWGGLGNSQAPLQVLHSSQGCVHSTGEKAWGGLGSSRASLQASWSSQGCVHSCGEKLGKAEEIPEPLFKRHGHPRGAYTLIGKGLGRPRKFPSLSSRVMVIPGVRTLFWGKAWGGQGNSRASLQASWSSQGCVHSSGERLGEAEEIPEPLFKRHGHSRGAYTLLGKGLGRPRKFPSLSSSVIVIPGMRTLFWGKAWGGRGNSRASLQASWSSQGCVHSSGERLGEAQEIPEPLFKRHGHPRSAYTLLGKGLGRPRKFLGLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCCIHPDGVYTQSGEVRKSGLYKDHSCLATSVTSYGKSTLCKTECKELH
Homology
The following BLAST results are available for this feature:
BLAST of Lag0039259 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0039259 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0039259 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0039259 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017956AT hook, DNA-binding motifSMARTSM00384AT_hook_2coord: 290..302
e-value: 32.0
score: 6.8
coord: 207..219
e-value: 3.1
score: 12.5
coord: 318..330
e-value: 11.0
score: 9.4
coord: 124..136
e-value: 3.1
score: 12.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0039259.1Lag0039259.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding