Lag0037969 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0037969
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr2: 11134575 .. 11138090 (-)
RNA-Seq ExpressionLag0037969
SyntenyLag0037969
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTCGTTTTCTTTATTTCTGATCAGCATCTTCTCCTTTCTTTCCGATCGCTTCTTCTTCATCGGTTTGGATCTTCTCGTTCATTTTCTGTTTGGATCGCATGGATTTCAACAAGCTATCGACTAATTCCAGGTTTCTTCCATTCCACGTTCTTTTCTTTTCTTTTTTTTTTCTTTTTTTTTCGATTTGGTCTCTTCGGATTGTTTCAGCATCATTATTTTCTTCGAATTGTTTTCCATCGAATCTTCTCTTGAGTTTTCTTCTTCTTAATTCCAGCTTTTTCTCTTCGGATTGATTCCAGTTTTCGTTTTCCAGAATTTTATCCCATAGAATTTTGTTACTCTAGTGATAGAATCTATCTATCAGTGATAGAGTTCTATCAGTGATAGAATTATATCCGATAGAATTCTGTTACTCTAGTGATAGAATCTATTTATCAGTGATAGAGTTTTATCTGATACAATTCTGTTACTCAAGTGCTAGAATCTATCTATCAGCGATAGAATTCTATCCGAGAGAATTTTGTTACTCTAGTGATAGAATCTATTTATCAGCGATAGAATTCTGTTACTCCAGTGATAGAATCTATCTATCAGTGATAGAGTCTATCTATCAGTGATAGAGTTCTATCAGCGATTGAAATGATAGAATTCTATTAGTGATAGACCTGATAGAATCTGTCGGTGATAGAATTCTATCACTGATAGATTCTATCGGTTCTATCACCGATAGAATTCTATCCGTTAAAAAGGGTATTTTAAGTAAATTCACGTTCCAGACCTTGAAATTTTGCCATTTTTGCAAAATGTTTCGCGGGCCGCTAAATCTGCAATTATTTTGGGCCGGTTTGCTATATTTGCAACCGGCCAAAAAAAAAATGGTTATTTCATTGGCTTGAATCTAGATTCTTCAAGATGCTAGAGATGCCAACTTACCAATGTATCAAACCTGTGAAGGTAGTATCTTGAAGAGACGACTTGCTTTAACACCGTCTTTTATTTTTGGAAAATTGCAGTGGGTGGCATTTTTAACTCTTGCATTTAGTTAATGAAAATATTTGGTCCTTGGTTACTTTGAATTTCATTGAAAATAGGCTTAGAAATTAGTGATTTTCGTTGCATCAATCCCTGTGGAAACGATATAAAAATACTTATCACTTGCTGCTGATCGTGTGCACTTGCACGTGTGTTTGTGAGTTTTTCTTGCATATTTAGAATCACTTTGCACAAGGCAACAATCCTGAAAGTGTGAGATGAGCTAGATGAATGGTTCTTTGAAGTGCTTGAATTTTTTCTCCCAATATCTCGCAACGAGAATGTGCGAAATAGGCTAGATGAATGTTTCTTTGAAGTGATTGAATTTTTCTCGCAATATCTCGCAGCAAGAAAGTGCGAGATAAACTAGAAGAATGGTTCTTTGAAGTGTTGAAATTTTTCTCGCAATATCTTGTAGTAAGAAAGTGCGAGAAAAACTATATATAGGGAATCATTCTTATGCAGTTCACCATATTAGAATTCATTTGGGCAAGTTATTTGACATGAATTTAAGTGGTTCCATATCGTTGTTAACAACCGTTACATTAAAATAACTAAAATATTTAGTATCTCAAACAACAATTAAAATAAAATAACTGCCAACAAGAGTTTAGCTCAACTGGCATAAAGTTGTACTGATAACCACAAGGTCTGTGGTTCGAATTTTCCTTCCTCACATATTGTAAAAAAAAAAAAAAATTGAAATTAAATAACTAAAGTGTTCAATACATCAAACAAGTGTTCCTATTAATCTCGTACAATTGACTTGTATGCAATAGAATTACGATCGACATGTTAGTCTATTATGGTCTACTTTGTCACATGGCCCACATTTATGCATTCTAAGAGTTTCACCAACATGAGAAATTCACACGAAAATCCAATCTGGTAAAATTTTAAATCTTTTGACAAATTTGAAAATATGATTCTAAATAATTAATTTTTATTTTAGATGTAATTGAAAACCTTCAACTTTTTAGCTAATTGTCATGTGTTAATGTGTGACCTTTATTTTTACCATTTGCCACTATGTCACATTTCTATTTTCATGGGAGAACTAGCTGAAGGTTTGTTTTGAAACCATTTTTGAAATTTTAAATCATAAGAAGAATATTGAAGCGTTATCTCTTTTGTAAAGTTCATTGCTATATGTGATATCTATTTTTTCAACTCATCAACACATTATAGTTTCGTTTTAACTTTTCATAATTTTAACGGTAATTAAAGTTGGTAGAAGCATTGTTTTGAAACAATTTTTGAAAATTTAAATCATAAGAGGAATATTGAAACGTTATCTCTTTTGTAAAGCTCATTGCTATATGTGTGGTATCTATTTTTTCAACTCATCAACACATTATAGTTTCGTTTTCACTTTTCATAATTTTAACGGTAAAGTTGGTAGAAGCATTGTTTTAAAATAAATTTATGGATTAATAAAAAGAAAATTAAAAAACTAATTATCGGGACACGATGGAAACGTACCTCCTAGTTTCAAATACATTTTATATAATTTAATGAACCTAGAGCTACAAAGTTGGGGGTAGTTTTTGCTCAACTTTATTTTATTTTTATTTTTTATTTTGAGAATATGTGGGACAAACCTTTTTTTAATCACTCCAACCTCCTCCAAAATCAACGCGAAACCAGTCATAATTAGTGGCAAGCACTATTTTGAGGCAAGAAAGGTGGTCTTCGATCTCTAAAAGGAAAAAAGTTTATATACATGGTATGATAAGGTAATAAAGATGGAGGATACTATTTCATCATTTCCTTTGTAACAAAAAGAAAAAAAAAGTAAGTAATCTTGTGTGTTCTTGGCATGGTAGGAAGAGTGAGAAAGATGAATATGAATGGGTTAGTTGGTGTTGTTGTCATGGTCAGTTTTCTTGCTTTGTGTGTAGCAGGCAATGAGAGTGATAATCCATATGGAGTGATAATCCATTTGATCCTCCTCCAGAGTCAGACTGGTTGGAATTTTCGAGCATTGAAGACGCGTGCAGCGACCTTGAAGAGTTGAAAAATGTTTGCATTTCTGTGATAAACTCTAATTCTCATGAAGATTTGAAGTCAAATATGACTGGCCTTCTCCTTCTATTCATCAACCAAACTCTTTATGCTGTCGTCGACGATTATTCTTACTTTCGAAATGAAAGTCTAAATAATCCACAATTTCGTAATGCTCGGACCATTACCGACTGCATGCAACAATTTCAGATGAGCAAAGATATTTTACAAGTTTTATTGAAGTTGCGGGGCCAGCAATTACACCCAAAAATTAACAAAGACTTGGATTTCCAATTCGTACGCATTGCTAACTTCTTCAATCTTTGTGAACTTTATTTTAACAGCGACTTTGGAATTCCAATTGGCGATTGGACCGAAGCTTTGGAGGCCCGGTTGGAATATGTGAAATCCCTCCTAGTTCTTTCAGCCAGAATCAAAAATACTATTAAATGTGGTTCCATCAAACCTTGCTAA

mRNA sequence

ATGGATCTCGTTTTCTTTATTTCTGATCAGCATCTTCTCCTTTCTTTCCGATCGCTTCTTCTTCATCGGTTTGGATCTTCTCGTTCATTTTCTGTTTGGATCGCATGGATTTCAACAAGCTATCGACTAATTCCAGAGTCAGACTGGTTGGAATTTTCGAGCATTGAAGACGCGTGCAGCGACCTTGAAGAGTTGAAAAATGTTTGCATTTCTGTGATAAACTCTAATTCTCATGAAGATTTGAAGTCAAATATGACTGGCCTTCTCCTTCTATTCATCAACCAAACTCTTTATGCTGTCGTCGACGATTATTCTTACTTTCGAAATGAAAGTCTAAATAATCCACAATTTCGTAATGCTCGGACCATTACCGACTGCATGCAACAATTTCAGATGAGCAAAGATATTTTACAAGTTTTATTGAAGTTGCGGGGCCAGCAATTACACCCAAAAATTAACAAAGACTTGGATTTCCAATTCGTACGCATTGCTAACTTCTTCAATCTTTGTGAACTTTATTTTAACAGCGACTTTGGAATTCCAATTGGCGATTGGACCGAAGCTTTGGAGGCCCGGTTGGAATATGTGAAATCCCTCCTAGTTCTTTCAGCCAGAATCAAAAATACTATTAAATGTGGTTCCATCAAACCTTGCTAA

Coding sequence (CDS)

ATGGATCTCGTTTTCTTTATTTCTGATCAGCATCTTCTCCTTTCTTTCCGATCGCTTCTTCTTCATCGGTTTGGATCTTCTCGTTCATTTTCTGTTTGGATCGCATGGATTTCAACAAGCTATCGACTAATTCCAGAGTCAGACTGGTTGGAATTTTCGAGCATTGAAGACGCGTGCAGCGACCTTGAAGAGTTGAAAAATGTTTGCATTTCTGTGATAAACTCTAATTCTCATGAAGATTTGAAGTCAAATATGACTGGCCTTCTCCTTCTATTCATCAACCAAACTCTTTATGCTGTCGTCGACGATTATTCTTACTTTCGAAATGAAAGTCTAAATAATCCACAATTTCGTAATGCTCGGACCATTACCGACTGCATGCAACAATTTCAGATGAGCAAAGATATTTTACAAGTTTTATTGAAGTTGCGGGGCCAGCAATTACACCCAAAAATTAACAAAGACTTGGATTTCCAATTCGTACGCATTGCTAACTTCTTCAATCTTTGTGAACTTTATTTTAACAGCGACTTTGGAATTCCAATTGGCGATTGGACCGAAGCTTTGGAGGCCCGGTTGGAATATGTGAAATCCCTCCTAGTTCTTTCAGCCAGAATCAAAAATACTATTAAATGTGGTTCCATCAAACCTTGCTAA

Protein sequence

MDLVFFISDQHLLLSFRSLLLHRFGSSRSFSVWIAWISTSYRLIPESDWLEFSSIEDACSDLEELKNVCISVINSNSHEDLKSNMTGLLLLFINQTLYAVVDDYSYFRNESLNNPQFRNARTITDCMQQFQMSKDILQVLLKLRGQQLHPKINKDLDFQFVRIANFFNLCELYFNSDFGIPIGDWTEALEARLEYVKSLLVLSARIKNTIKCGSIKPC
Homology
BLAST of Lag0037969 vs. NCBI nr
Match: KAG6585821.1 (hypothetical protein SDJN03_18554, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 125.6 bits (314), Expect = 5.4e-25
Identity = 72/161 (44.72%), Postives = 96/161 (59.63%), Query Frame = 0

Query: 59  CSDLEELKNVCISVINSNSHEDLKSNMTGLLLLFINQTLYAVVDDYSYFRNESLNNP-QF 118
           C    ELK++CISVINSN  EDLKSN+TG L +FIN+TL+ V+DD+SY  N++LN     
Sbjct: 36  CDRTSELKDLCISVINSNPCEDLKSNLTGFLAIFINETLHVVIDDHSYLLNQTLNGQLDN 95

Query: 119 RNARTITDCMQQFQMSKDILQVLLKLRGQQLHPKINKDLDFQFVRIANFFNLCELYFNSD 178
           R  +    C  Q+QMSKD L+VLL+    +L  + N DL+    +I N+  LCE+ F   
Sbjct: 96  RTLQVFRSCASQYQMSKDSLRVLLE---DELLKQHNADLNMDLGQIDNYLALCEMEFEGF 155

Query: 179 FGIPIGDWTEALEARLEYVKSLLVLSARIKNTIKCGSIKPC 219
              P      A + R +YV SLL+LS +  N IKC  I  C
Sbjct: 156 IEEP-----SAWKTRYDYVSSLLILSLQTTNLIKCNRIHVC 188

BLAST of Lag0037969 vs. NCBI nr
Match: KAG6599042.1 (hypothetical protein SDJN03_08820, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-24
Identity = 73/167 (43.71%), Postives = 99/167 (59.28%), Query Frame = 0

Query: 55  IEDACSDLEELKNVCISVINSNSHEDLKSNMTGLLLLFINQTLYAVVDDYSYFRNESLNN 114
           + D C+  EELK++C SVI S+  +DLK+N+T LL +FINQTL  VVDD+SY  N++LN 
Sbjct: 34  VHDTCNKTEELKDLCNSVIGSDPRDDLKTNLTSLLTIFINQTLRVVVDDHSYLYNQTLNG 93

Query: 115 P-QFRNARTITDCMQQFQMSKDILQVLLKLRGQQLHPKINKDLDFQFVRIANFFNLCELY 174
               R       CM  +QMSKD LQ LL +   +L    N DL+    ++ NF +LCE+ 
Sbjct: 94  ELDNRTLEVFKSCMNLYQMSKDSLQALLDV---ELLKNKNADLNMDLAQVDNFLDLCEVD 153

Query: 175 FNSDFGIPIGDWTEAL--EARLEYVKSLLVLSARIKNTIKCGSIKPC 219
           F        G   E+L  ++R +YV SLL+LS R+ N IKC  I  C
Sbjct: 154 FE-------GFTPESLTWKSRYDYVSSLLILSLRMTNLIKCNHIHYC 190

BLAST of Lag0037969 vs. NCBI nr
Match: KAG6599036.1 (hypothetical protein SDJN03_08814, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 116.3 bits (290), Expect = 3.3e-22
Identity = 68/165 (41.21%), Postives = 99/165 (60.00%), Query Frame = 0

Query: 55  IEDACSDLEELKNVCISVINSNSHEDLKSNMTGLLLLFINQTLYAVVDDYSYFRNESLNN 114
           I+D C+  E+ K++CISVI+S+  EDLK N    L++FIN+TL  ++DD+SY  N++LN 
Sbjct: 8   IQDTCNRTEDFKDLCISVIDSDPREDLKLNSMDFLVIFINRTLQVIIDDHSYLLNQTLNE 67

Query: 115 PQFRNARTI-TDCMQQFQMSKDILQVLLKLRGQQLHPKINKDLDFQFVRIANFFNLCELY 174
                 R I   CM  +QMSKD L+VLL    ++L  + N DL+ +  +I  + +LC+  
Sbjct: 68  ELDNRTRHIFMGCMTLYQMSKDSLRVLL---NEELLKQPNADLNMKLQQIEGYLDLCQND 127

Query: 175 FNSDFGIPIGDWTEALEARLEYVKSLLVLSARIKNTIKCGSIKPC 219
           F      P   WT    +R +YV SLL+LS R+ N IKC  I+ C
Sbjct: 128 FEGFTPTP-STWT----SRYDYVISLLILSFRMMNLIKCNYIRAC 164

BLAST of Lag0037969 vs. NCBI nr
Match: KAA0055284.1 (putative invertase inhibitor [Cucumis melo var. makuwa] >TYJ99207.1 putative invertase inhibitor [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 7.1e-09
Identity = 54/195 (27.69%), Postives = 92/195 (47.18%), Query Frame = 0

Query: 26  SSRSFSVWIAWISTSYRLIPESDWLEFSSIEDACSDLEELKNVCISVINSNSHEDLKSNM 85
           S R F V +  +S       + +      +   C+   ELKN+C+S I+S    DLKSN+
Sbjct: 3   SDRQFLVLLCILSLCMLTKADQNTTINDFVRHTCNRTHELKNLCLSQISSEPRNDLKSNL 62

Query: 86  TGLLLLFINQTLYAVVDDYSYFRNESLNNPQFRNAR-TITDCMQQFQMSKDILQVLLKLR 145
           TGLL++F+NQ++    +D S+   E  +N   R+ +  + DC+Q FQ+    L+  +++ 
Sbjct: 63  TGLLMIFVNQSISNFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEIL 122

Query: 146 GQQLHPKINKDLDFQFVRIANFFNLCELYFNSDFGIPI-GDWTEALEARLEYVKSLLVLS 205
                 +     D + + + N  NL    F+   G P+  +W    ++R     +LL LS
Sbjct: 123 ------QTKTGYDAEQLPVGNVGNLAVECFDDFEGTPVPPEW----QSRYNASFALLKLS 182

Query: 206 ARIKNTIKCGSIKPC 219
             + N I C     C
Sbjct: 183 MAMINLITCNRDYAC 187

BLAST of Lag0037969 vs. NCBI nr
Match: XP_022137307.1 (uncharacterized protein LOC111008804 [Momordica charantia])

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-05
Identity = 49/171 (28.65%), Postives = 81/171 (47.37%), Query Frame = 0

Query: 53  SSIEDACSDL-EELKNVCISVINSNSHEDLKSNMTGLLLLFINQTLYAVVDDYSYFRNES 112
           S + + C+   EE   VCI VI+S+ H+DLK N++GLL +FIN ++    D++ Y   + 
Sbjct: 12  SFVNNTCNKFEEEFIKVCIDVIDSDPHQDLKLNLSGLLAIFINHSIDNATDNHLYLMEQL 71

Query: 113 LNNPQFRNAR-TITDCMQQFQMSKDILQVLLKLRGQQLHPKINKDLDFQFVRIANFFN-- 172
             +   ++ R T   C++Q++   DIL+         L   +  D D   + +++ F+  
Sbjct: 72  KRSDLDKDIRYTFNVCVEQYERGLDILK-------SSLEALLKNDKDDLGLILSDAFDKI 131

Query: 173 -LCELYFNSDFGIPIGDWTEALEARLEYVKSLLVLSARIKNTIKCGSIKPC 219
             CE  F S    P   W     A    ++ LL LS    N I+C  +  C
Sbjct: 132 VACEDDFESTPEPP--SWL----AHYLPLRKLLALSMGTANLIQCKKVAAC 169

BLAST of Lag0037969 vs. ExPASy TrEMBL
Match: A0A5D3BJB5 (Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004170 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.4e-09
Identity = 54/195 (27.69%), Postives = 92/195 (47.18%), Query Frame = 0

Query: 26  SSRSFSVWIAWISTSYRLIPESDWLEFSSIEDACSDLEELKNVCISVINSNSHEDLKSNM 85
           S R F V +  +S       + +      +   C+   ELKN+C+S I+S    DLKSN+
Sbjct: 3   SDRQFLVLLCILSLCMLTKADQNTTINDFVRHTCNRTHELKNLCLSQISSEPRNDLKSNL 62

Query: 86  TGLLLLFINQTLYAVVDDYSYFRNESLNNPQFRNAR-TITDCMQQFQMSKDILQVLLKLR 145
           TGLL++F+NQ++    +D S+   E  +N   R+ +  + DC+Q FQ+    L+  +++ 
Sbjct: 63  TGLLMIFVNQSISNFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEIL 122

Query: 146 GQQLHPKINKDLDFQFVRIANFFNLCELYFNSDFGIPI-GDWTEALEARLEYVKSLLVLS 205
                 +     D + + + N  NL    F+   G P+  +W    ++R     +LL LS
Sbjct: 123 ------QTKTGYDAEQLPVGNVGNLAVECFDDFEGTPVPPEW----QSRYNASFALLKLS 182

Query: 206 ARIKNTIKCGSIKPC 219
             + N I C     C
Sbjct: 183 MAMINLITCNRDYAC 187

BLAST of Lag0037969 vs. ExPASy TrEMBL
Match: A0A6J1C7W5 (uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008804 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.9e-06
Identity = 49/171 (28.65%), Postives = 81/171 (47.37%), Query Frame = 0

Query: 53  SSIEDACSDL-EELKNVCISVINSNSHEDLKSNMTGLLLLFINQTLYAVVDDYSYFRNES 112
           S + + C+   EE   VCI VI+S+ H+DLK N++GLL +FIN ++    D++ Y   + 
Sbjct: 12  SFVNNTCNKFEEEFIKVCIDVIDSDPHQDLKLNLSGLLAIFINHSIDNATDNHLYLMEQL 71

Query: 113 LNNPQFRNAR-TITDCMQQFQMSKDILQVLLKLRGQQLHPKINKDLDFQFVRIANFFN-- 172
             +   ++ R T   C++Q++   DIL+         L   +  D D   + +++ F+  
Sbjct: 72  KRSDLDKDIRYTFNVCVEQYERGLDILK-------SSLEALLKNDKDDLGLILSDAFDKI 131

Query: 173 -LCELYFNSDFGIPIGDWTEALEARLEYVKSLLVLSARIKNTIKCGSIKPC 219
             CE  F S    P   W     A    ++ LL LS    N I+C  +  C
Sbjct: 132 VACEDDFESTPEPP--SWL----AHYLPLRKLLALSMGTANLIQCKKVAAC 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6585821.15.4e-2544.72hypothetical protein SDJN03_18554, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6599042.12.1e-2443.71hypothetical protein SDJN03_08820, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6599036.13.3e-2241.21hypothetical protein SDJN03_08814, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0055284.17.1e-0927.69putative invertase inhibitor [Cucumis melo var. makuwa] >TYJ99207.1 putative inv... [more]
XP_022137307.11.6e-0528.65uncharacterized protein LOC111008804 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BJB53.4e-0927.69Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A6J1C7W57.9e-0628.65uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilyGENE3D1.20.140.40Invertase/pectin methylesterase inhibitor family proteincoord: 53..210
e-value: 4.7E-6
score: 28.6
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilySUPERFAMILY101148Plant invertase/pectin methylesterase inhibitorcoord: 53..186

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0037969.1Lag0037969.1mRNA