Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCTCGCCGGGAAAAGAGCTCCTCCGGCGAGATCTTCTCCTTCCCGAGCACTCCGGTTCAGGATCAGGATTCCGATTTCGAATTCGGATCCATTACTCCTGATTCTCCTTCTACTTTCAACAATTCGCCGGCAGATCATCTGTTCGTCAATGGCCGTCTCTTGCCTCACTCTTTTCCGCCGCAGCCGATCGGTGTCTACGCCGTCGATCGGACGAGCAGCGTCGGGAGTAAGGACTCGATCATGTCGTCGAGGAGTAACAGCACTAATAGTAGGAGCAGTAGCAGTTGCGGTAGCAGTACTAGCGCGAGGACGAGTTCGAGCGATAATAATGTCGAGAGATCCTCGAGATTCTCTCCGCATCAGAAGAAATCGCCGAAATCTTCTGTTTCCGCTCAGGTGTACGGATCGTCTCAGAGATGGCAGTTCATCGCGTCGGTGCCCGTGCCGGCGACGCTGAGCCGGGAGAATTCGAGGAGGAAGAAGGCCGCGGAGAAGATTGGGGGGAAATCGGATTTGAGGCGGAAGAAGAGGCGGACGGAGAAGACGACGGCGAGGAAGAAGAAAAAGAAGAAGAAGAAGAAGAATATGTGGTTCGGAAGGAAGGTTTTCCGGTGGATTATTCTGGTTTGTAAGGAATGTCATGCGATCGAACCGTCGAGGAAGGATGAGATTGTGAGGAAGACGAAATCGACGAAGCCAAAGAGTTATTGA
mRNA sequence
ATGGAGTCTCGCCGGGAAAAGAGCTCCTCCGGCGAGATCTTCTCCTTCCCGAGCACTCCGGTTCAGGATCAGGATTCCGATTTCGAATTCGGATCCATTACTCCTGATTCTCCTTCTACTTTCAACAATTCGCCGGCAGATCATCTGTTCGTCAATGGCCGTCTCTTGCCTCACTCTTTTCCGCCGCAGCCGATCGGTGTCTACGCCGTCGATCGGACGAGCAGCGTCGGGAGTAAGGACTCGATCATGTCGTCGAGGAGTAACAGCACTAATAGTAGGAGCAGTAGCAGTTGCGGTAGCAGTACTAGCGCGAGGACGAGTTCGAGCGATAATAATGTCGAGAGATCCTCGAGATTCTCTCCGCATCAGAAGAAATCGCCGAAATCTTCTGTTTCCGCTCAGGTGTACGGATCGTCTCAGAGATGGCAGTTCATCGCGTCGGTGCCCGTGCCGGCGACGCTGAGCCGGGAGAATTCGAGGAGGAAGAAGGCCGCGGAGAAGATTGGGGGGAAATCGGATTTGAGGCGGAAGAAGAGGCGGACGGAGAAGACGACGGCGAGGAAGAAGAAAAAGAAGAAGAAGAAGAAGAATATGTGGTTCGGAAGGAAGGTTTTCCGGTGGATTATTCTGGTTTGTAAGGAATGTCATGCGATCGAACCGTCGAGGAAGGATGAGATTGTGAGGAAGACGAAATCGACGAAGCCAAAGAGTTATTGA
Coding sequence (CDS)
ATGGAGTCTCGCCGGGAAAAGAGCTCCTCCGGCGAGATCTTCTCCTTCCCGAGCACTCCGGTTCAGGATCAGGATTCCGATTTCGAATTCGGATCCATTACTCCTGATTCTCCTTCTACTTTCAACAATTCGCCGGCAGATCATCTGTTCGTCAATGGCCGTCTCTTGCCTCACTCTTTTCCGCCGCAGCCGATCGGTGTCTACGCCGTCGATCGGACGAGCAGCGTCGGGAGTAAGGACTCGATCATGTCGTCGAGGAGTAACAGCACTAATAGTAGGAGCAGTAGCAGTTGCGGTAGCAGTACTAGCGCGAGGACGAGTTCGAGCGATAATAATGTCGAGAGATCCTCGAGATTCTCTCCGCATCAGAAGAAATCGCCGAAATCTTCTGTTTCCGCTCAGGTGTACGGATCGTCTCAGAGATGGCAGTTCATCGCGTCGGTGCCCGTGCCGGCGACGCTGAGCCGGGAGAATTCGAGGAGGAAGAAGGCCGCGGAGAAGATTGGGGGGAAATCGGATTTGAGGCGGAAGAAGAGGCGGACGGAGAAGACGACGGCGAGGAAGAAGAAAAAGAAGAAGAAGAAGAAGAATATGTGGTTCGGAAGGAAGGTTTTCCGGTGGATTATTCTGGTTTGTAAGGAATGTCATGCGATCGAACCGTCGAGGAAGGATGAGATTGTGAGGAAGACGAAATCGACGAAGCCAAAGAGTTATTGA
Protein sequence
MESRREKSSSGEIFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSDNNVERSSRFSPHQKKSPKSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAAEKIGGKSDLRRKKRRTEKTTARKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIVRKTKSTKPKSY
Homology
BLAST of Lag0037887 vs. NCBI nr
Match:
XP_023525336.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo] >KAG6607885.1 hypothetical protein SDJN03_01227, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037411.1 hypothetical protein SDJN02_01037, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 400.6 bits (1028), Expect = 9.5e-108
Identity = 229/244 (93.85%), Postives = 233/244 (95.49%), Query Frame = 0
Query: 1 MESRREKSSSGEIFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
MESRRE+SSSGEIFSFPSTPV QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH
Sbjct: 1 MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
Query: 61 SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSD-NNVERSS 120
SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSS+ NNV+RSS
Sbjct: 61 SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSESNNVDRSS 120
Query: 121 RFSPHQKKSPKSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAAEKIGGKSDLRRK 180
RFS HQKKSPKSSVSAQVYGSSQRWQFIASVPVP TLSRENSRRKKA EKIGGKSDLRR
Sbjct: 121 RFSSHQKKSPKSSVSAQVYGSSQRWQFIASVPVPTTLSRENSRRKKAVEKIGGKSDLRRN 180
Query: 181 KRRTEKTTAR--KKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIV-RKTKSTK 239
K+RTEKTTAR KKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIV RKTK TK
Sbjct: 181 KKRTEKTTARKKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIVMRKTKLTK 240
BLAST of Lag0037887 vs. NCBI nr
Match:
XP_022941070.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata])
HSP 1 Score: 398.3 bits (1022), Expect = 4.7e-107
Identity = 228/244 (93.44%), Postives = 232/244 (95.08%), Query Frame = 0
Query: 1 MESRREKSSSGEIFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
MESRRE+SSSGEIFSFPSTPV QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH
Sbjct: 1 MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
Query: 61 SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSD-NNVERSS 120
SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSS+ NNV+RSS
Sbjct: 61 SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSESNNVDRSS 120
Query: 121 RFSPHQKKSPKSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAAEKIGGKSDLRRK 180
RFS HQKKSPKSSVSAQVYGSSQRWQFIASVPVP TLSRENSRRKKA EKIGGKSDLRR
Sbjct: 121 RFSSHQKKSPKSSVSAQVYGSSQRWQFIASVPVPTTLSRENSRRKKAVEKIGGKSDLRRN 180
Query: 181 KRRTEKTTAR--KKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIV-RKTKSTK 239
K+R EKTTAR KKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIV RKTK TK
Sbjct: 181 KKRIEKTTARKKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIVMRKTKLTK 240
BLAST of Lag0037887 vs. NCBI nr
Match:
XP_022981938.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima])
HSP 1 Score: 392.1 bits (1006), Expect = 3.4e-105
Identity = 228/245 (93.06%), Postives = 232/245 (94.69%), Query Frame = 0
Query: 1 MESRREKSSSGEIFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
MESRRE+SSSGEIFSFPSTPV QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH
Sbjct: 1 MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
Query: 61 SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSD-NNVERSS 120
SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSS+ NNV+RSS
Sbjct: 61 SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSESNNVDRSS 120
Query: 121 RFSPHQKKSPKSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAAEKIGGKSDLRRK 180
RFS HQKKSPKSSVSAQVYGSSQRWQFIAS VPATLSRENSRRKKA EKIGGKSDLRR
Sbjct: 121 RFSSHQKKSPKSSVSAQVYGSSQRWQFIAS--VPATLSRENSRRKKAVEKIGGKSDLRRN 180
Query: 181 KRRTEKTTAR---KKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIV-RKTKST 239
K+RTEKTTAR KKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIV RKTK T
Sbjct: 181 KKRTEKTTARKKKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIVMRKTKLT 240
BLAST of Lag0037887 vs. NCBI nr
Match:
XP_038899281.1 (probable membrane-associated kinase regulator 1 [Benincasa hispida])
HSP 1 Score: 380.6 bits (976), Expect = 1.0e-101
Identity = 226/256 (88.28%), Postives = 228/256 (89.06%), Query Frame = 0
Query: 1 MESRREKSSSGEIFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSF 60
MESRREKSSSGEIFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSF
Sbjct: 1 MESRREKSSSGEIFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSF 60
Query: 61 PPQPIGVYAVD------RTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSDNNVE 120
PPQPIGVY VD RTSSVGSKDS MSSRSNSTNSRSSSSCGSSTSARTSSSDNN
Sbjct: 61 PPQPIGVYTVDVSRQTSRTSSVGSKDSFMSSRSNSTNSRSSSSCGSSTSARTSSSDNNNN 120
Query: 121 ----RSSRFSPHQKKSPKSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAAEKIGG 180
RSSRFS +QKKS KSSVSAQVYGSSQRWQFIASV VP TLSRENSRRKK+ EKIGG
Sbjct: 121 NVDIRSSRFSSYQKKSQKSSVSAQVYGSSQRWQFIASVSVPVTLSRENSRRKKSVEKIGG 180
Query: 181 KSDLRRKKRRTEKT-TARKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPS------RK 238
KSDLRRKKRRTEKT TARKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPS RK
Sbjct: 181 KSDLRRKKRRTEKTSTARKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEVVRK 240
BLAST of Lag0037887 vs. NCBI nr
Match:
XP_011654065.1 (probable membrane-associated kinase regulator 3 [Cucumis sativus] >KGN55114.1 hypothetical protein Csa_011965 [Cucumis sativus])
HSP 1 Score: 364.0 bits (933), Expect = 9.9e-97
Identity = 216/255 (84.71%), Postives = 223/255 (87.45%), Query Frame = 0
Query: 1 MESRREKSSSGEIFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSF 60
MESRRE SS EIFSFPSTPV DQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSF
Sbjct: 3 MESRRENGSSAEIFSFPSTPVLDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSF 62
Query: 61 PPQPIGVYAVD-------RTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSD--- 120
PPQPI VYAVD RTSSVGSKDS MSSRSNSTNSRSSSSCGSSTSARTSSSD
Sbjct: 63 PPQPISVYAVDLASRQTSRTSSVGSKDSFMSSRSNSTNSRSSSSCGSSTSARTSSSDNSN 122
Query: 121 --NNVE-RSSRFSPHQKKSPKSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAAEK 180
NN+E RSSRFS +QKKS KSSVSAQVYGS QRWQFIASV VP +LSRENSRRKK+ EK
Sbjct: 123 NNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVEK 182
Query: 181 IGGKSDLRRKKRRTEKT-TARKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEI 238
IGGKSDLRRKKRR EKT TARKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEI
Sbjct: 183 IGGKSDLRRKKRRAEKTSTARKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEI 242
BLAST of Lag0037887 vs. ExPASy TrEMBL
Match:
A0A6J1FSH9 (pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita moschata OX=3662 GN=LOC111446467 PE=4 SV=1)
HSP 1 Score: 398.3 bits (1022), Expect = 2.3e-107
Identity = 228/244 (93.44%), Postives = 232/244 (95.08%), Query Frame = 0
Query: 1 MESRREKSSSGEIFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
MESRRE+SSSGEIFSFPSTPV QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH
Sbjct: 1 MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
Query: 61 SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSD-NNVERSS 120
SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSS+ NNV+RSS
Sbjct: 61 SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSESNNVDRSS 120
Query: 121 RFSPHQKKSPKSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAAEKIGGKSDLRRK 180
RFS HQKKSPKSSVSAQVYGSSQRWQFIASVPVP TLSRENSRRKKA EKIGGKSDLRR
Sbjct: 121 RFSSHQKKSPKSSVSAQVYGSSQRWQFIASVPVPTTLSRENSRRKKAVEKIGGKSDLRRN 180
Query: 181 KRRTEKTTAR--KKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIV-RKTKSTK 239
K+R EKTTAR KKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIV RKTK TK
Sbjct: 181 KKRIEKTTARKKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIVMRKTKLTK 240
BLAST of Lag0037887 vs. ExPASy TrEMBL
Match:
A0A6J1J3G5 (pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita maxima OX=3661 GN=LOC111480935 PE=4 SV=1)
HSP 1 Score: 392.1 bits (1006), Expect = 1.6e-105
Identity = 228/245 (93.06%), Postives = 232/245 (94.69%), Query Frame = 0
Query: 1 MESRREKSSSGEIFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
MESRRE+SSSGEIFSFPSTPV QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH
Sbjct: 1 MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
Query: 61 SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSD-NNVERSS 120
SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSS+ NNV+RSS
Sbjct: 61 SFPPQPIGVYAVDRTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSESNNVDRSS 120
Query: 121 RFSPHQKKSPKSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAAEKIGGKSDLRRK 180
RFS HQKKSPKSSVSAQVYGSSQRWQFIAS VPATLSRENSRRKKA EKIGGKSDLRR
Sbjct: 121 RFSSHQKKSPKSSVSAQVYGSSQRWQFIAS--VPATLSRENSRRKKAVEKIGGKSDLRRN 180
Query: 181 KRRTEKTTAR---KKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIV-RKTKST 239
K+RTEKTTAR KKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIV RKTK T
Sbjct: 181 KKRTEKTTARKKKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIVMRKTKLT 240
BLAST of Lag0037887 vs. ExPASy TrEMBL
Match:
A0A0A0L251 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G631560 PE=4 SV=1)
HSP 1 Score: 364.0 bits (933), Expect = 4.8e-97
Identity = 216/255 (84.71%), Postives = 223/255 (87.45%), Query Frame = 0
Query: 1 MESRREKSSSGEIFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSF 60
MESRRE SS EIFSFPSTPV DQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSF
Sbjct: 3 MESRRENGSSAEIFSFPSTPVLDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSF 62
Query: 61 PPQPIGVYAVD-------RTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSD--- 120
PPQPI VYAVD RTSSVGSKDS MSSRSNSTNSRSSSSCGSSTSARTSSSD
Sbjct: 63 PPQPISVYAVDLASRQTSRTSSVGSKDSFMSSRSNSTNSRSSSSCGSSTSARTSSSDNSN 122
Query: 121 --NNVE-RSSRFSPHQKKSPKSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAAEK 180
NN+E RSSRFS +QKKS KSSVSAQVYGS QRWQFIASV VP +LSRENSRRKK+ EK
Sbjct: 123 NNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVEK 182
Query: 181 IGGKSDLRRKKRRTEKT-TARKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEI 238
IGGKSDLRRKKRR EKT TARKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEI
Sbjct: 183 IGGKSDLRRKKRRAEKTSTARKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEI 242
BLAST of Lag0037887 vs. ExPASy TrEMBL
Match:
A0A5D3DWZ9 (Putative membrane-associated kinase regulator 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001730 PE=4 SV=1)
HSP 1 Score: 356.7 bits (914), Expect = 7.6e-95
Identity = 212/258 (82.17%), Postives = 221/258 (85.66%), Query Frame = 0
Query: 1 MESRREKSSSGEIFSFPSTPVQDQDS-DFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60
MESRRE SS EIFSFPSTPVQDQDS DFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS
Sbjct: 1 MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60
Query: 61 FPPQPIGVYAVD-------RTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120
FPPQPI VYAVD RTSSVGSKDS +SSRSNSTNSRSSSSCGSSTSARTSSSDNN
Sbjct: 61 FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120
Query: 121 VE------RSSRFSPHQKKSPKSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAAE 180
RSSRFS +QKKS KSSVSAQVYGS QRWQFIASV VP +LSRENSRRKK+ E
Sbjct: 121 NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE 180
Query: 181 KIGGKSDLRRKKRRTEKTTA--RKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD 238
KIGGKSDLRR KRRTEKT+ +KKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD
Sbjct: 181 KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD 240
BLAST of Lag0037887 vs. ExPASy TrEMBL
Match:
A0A1S3CKA5 (probable membrane-associated kinase regulator 1 OS=Cucumis melo OX=3656 GN=LOC103501769 PE=4 SV=1)
HSP 1 Score: 356.7 bits (914), Expect = 7.6e-95
Identity = 212/258 (82.17%), Postives = 221/258 (85.66%), Query Frame = 0
Query: 1 MESRREKSSSGEIFSFPSTPVQDQDS-DFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60
MESRRE SS EIFSFPSTPVQDQDS DFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS
Sbjct: 1 MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60
Query: 61 FPPQPIGVYAVD-------RTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120
FPPQPI VYAVD RTSSVGSKDS +SSRSNSTNSRSSSSCGSSTSARTSSSDNN
Sbjct: 61 FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120
Query: 121 VE------RSSRFSPHQKKSPKSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAAE 180
RSSRFS +QKKS KSSVSAQVYGS QRWQFIASV VP +LSRENSRRKK+ E
Sbjct: 121 NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE 180
Query: 181 KIGGKSDLRRKKRRTEKTTA--RKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD 238
KIGGKSDLRR KRRTEKT+ +KKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD
Sbjct: 181 KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD 240
BLAST of Lag0037887 vs. TAIR 10
Match:
AT3G15250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53163.1); Has 409 Blast hits to 218 proteins in 63 species: Archae - 0; Bacteria - 22; Metazoa - 178; Fungi - 77; Plants - 38; Viruses - 1; Other Eukaryotes - 93 (source: NCBI BLink). )
HSP 1 Score: 70.1 bits (170), Expect = 2.7e-12
Identity = 82/239 (34.31%), Postives = 114/239 (47.70%), Query Frame = 0
Query: 18 STPVQDQDSDFEFGSITPDSPST---FNNSPADHLFVNGRLLPHSFPPQPIGVYAVDRTS 77
+T + +FEFGS+TP SPS NSPADHLF NGRLLPH+FP ++
Sbjct: 7 TTNSDEPPPEFEFGSLTPTSPSQDSFSENSPADHLFFNGRLLPHAFP----AASSIYTKR 66
Query: 78 SVGSKDSIMSSRSNSTNSRS---SSSCGSSTSARTSSSDNN------------------- 137
S+ S S +SR NSTNS S S++ +S S RTS S +N
Sbjct: 67 SISSTTSEYTSRCNSTNSSSSFGSNNSSTSQSPRTSYSTSNKNNSPINQEPLDLKLKPPI 126
Query: 138 ---------VERSSRFSP-HQKKSPKSSVSAQVYG--SSQRWQFIASVPVPATLSRENSR 197
+ SS SP H+++ + +Y SSQRWQ+I VPV
Sbjct: 127 SRCDKTVNTMSSSSYSSPQHKRRKAMEMATTSLYRSYSSQRWQYITPVPV---------- 186
Query: 198 RKKAAEKIGGKSDLRRKKRRTEKTTARKKKKKKKKKNMWFGRKVFRWIILVCKECHAIE 220
R ++GG+ ++K R K T ++ + K +W RK+ I VC+ECHA+E
Sbjct: 187 RMSGGIRVGGR---KKKAVRVRKKTEERRVSRVMK--LW--RKLLMAAIFVCRECHALE 224
BLAST of Lag0037887 vs. TAIR 10
Match:
AT1G53163.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15250.1); Has 315 Blast hits to 216 proteins in 74 species: Archae - 0; Bacteria - 86; Metazoa - 43; Fungi - 52; Plants - 27; Viruses - 1; Other Eukaryotes - 106 (source: NCBI BLink). )
HSP 1 Score: 67.4 bits (163), Expect = 1.8e-11
Identity = 91/296 (30.74%), Postives = 134/296 (45.27%), Query Frame = 0
Query: 2 ESRREKSSSGEIFSFPSTPVQDQ-DSDFEFGSITPDSPST---FNNSPADHLFVNGRLLP 61
++R+ +SGE + P T ++ SDFEFGS+TP SPS NSPADHLF+NGRLLP
Sbjct: 3 DNRKTTPNSGE--TKPETSLETSLSSDFEFGSLTPTSPSQDPFSENSPADHLFLNGRLLP 62
Query: 62 HSFPPQPIGVYAVDRTSSVGS-KDSIMSSRSNSTNSRSS-----SSCG------------ 121
HSFP I +V RT+S + + SSRS+ ++S +S S+C
Sbjct: 63 HSFPTSTITTRSVSRTTSENTFRSDSWSSRSSDSSSPTSYTPRTSTCNIFKITSSSTGHG 122
Query: 122 --------------------SSTSARTSS--------------------------SDNNV 181
+++S +T++ + N
Sbjct: 123 KETNITCFGTRSEEIMCLRPATSSKKTNTCISKEYYHKPSLILDLKKRPPVENGKAVNTT 182
Query: 182 ERSSRFSPHQKKSPKSSVSAQVYGS-SQRWQFIASVPVPATLSRENSRRKKAAE-KIGGK 221
+ S ++K V+AQ+YGS S+RWQ I V RE S + K K+GG
Sbjct: 183 NKVSYLPQCKRKKATEIVTAQLYGSYSRRWQHITPV-----FKREGSVKSKGGGIKVGG- 242
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023525336.1 | 9.5e-108 | 93.85 | pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo] >KAG6607885.... | [more] |
XP_022941070.1 | 4.7e-107 | 93.44 | pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata] | [more] |
XP_022981938.1 | 3.4e-105 | 93.06 | pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] | [more] |
XP_038899281.1 | 1.0e-101 | 88.28 | probable membrane-associated kinase regulator 1 [Benincasa hispida] | [more] |
XP_011654065.1 | 9.9e-97 | 84.71 | probable membrane-associated kinase regulator 3 [Cucumis sativus] >KGN55114.1 hy... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FSH9 | 2.3e-107 | 93.44 | pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita moschata OX=3662 GN=LOC11144... | [more] |
A0A6J1J3G5 | 1.6e-105 | 93.06 | pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114809... | [more] |
A0A0A0L251 | 4.8e-97 | 84.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G631560 PE=4 SV=1 | [more] |
A0A5D3DWZ9 | 7.6e-95 | 82.17 | Putative membrane-associated kinase regulator 1 OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A1S3CKA5 | 7.6e-95 | 82.17 | probable membrane-associated kinase regulator 1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |
AT3G15250.1 | 2.7e-12 | 34.31 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G53163.1 | 1.8e-11 | 30.74 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |