Lag0037884 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0037884
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr2: 10175437 .. 10176134 (-)
RNA-Seq ExpressionLag0037884
SyntenyLag0037884
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATTACGGTACGGTGATATATTACATTTATATTCACAAAACGGTGCGTTTCACTTCAATCAGGCCATCGAATTTTCCACTTCCATTTTTGTCCAAATCTCGGGGTTTCAGTTCAAAGTGAAAGCCCGTACAAATTTTCTTGTAGAATTATTGCAAAGTGCGATAGAAAAAGAAGGAAAAAAAAAAAAGGAAGAAGAAGAAAGAAAGCGAGGAGAGCGAAGGGCAGTTCCATTAAAACCAACAAAATTTCTCTTCGATTTCGCGGCTCTCACGAAGCCTTTCTCTGCAAATAACAGAGTGCAAAGGAGGAAGAGATCTGTGGTGTTATTGCTCAGAAACCAGTTCCTCCTAACAGCGTTTTGAATCGCATTCTTGGGTAAGTTTCCGAATCTCAATCTGTCAACAAATGGATTGCAATTGAATTTCATAACTCTAGAGACCCCATTTTGAAGCCACTCCTTTGTTGTTGTTTCACTTTCGATGTTGACTTTTTTCCCCCAGTGTTTCTCATTATGTTGGCCTGTCGCCATTGCGTATCTTACTTCCTCCAACCCGTCACATGTCTTATGTTGAAACCCACTTGCTTTACTTCGGGTTCAAGGGCTGCTGCGCATTATCTCATGTTTATCTCAATTGTTCTTTTCAAGAATTTGGATTCTGTTTCGTTGTCAAATTCTTGCTTTGGTTGGTGTAG

mRNA sequence

ATGTCAATTACGAGTGCAAAGGAGGAAGAGATCTGTGGTGTTATTGCTCAGAAACCAGTTCCTCCTAACAGCGTTTTGAATCGCATTCTTGGTGTTTCTCATTATGTTGGCCTGTCGCCATTGCGTATCTTACTTCCTCCAACCCGTCACATGTCTTATGTTGAAACCCACTTGCTTTACTTCGGGTTCAAGGGCTGCTGCGCATTATCTCATGTTTATCTCAATTGTTCTTTTCAAGAATTTGGATTCTGTTTCGTTGTCAAATTCTTGCTTTGGTTGGTGTAG

Coding sequence (CDS)

ATGTCAATTACGAGTGCAAAGGAGGAAGAGATCTGTGGTGTTATTGCTCAGAAACCAGTTCCTCCTAACAGCGTTTTGAATCGCATTCTTGGTGTTTCTCATTATGTTGGCCTGTCGCCATTGCGTATCTTACTTCCTCCAACCCGTCACATGTCTTATGTTGAAACCCACTTGCTTTACTTCGGGTTCAAGGGCTGCTGCGCATTATCTCATGTTTATCTCAATTGTTCTTTTCAAGAATTTGGATTCTGTTTCGTTGTCAAATTCTTGCTTTGGTTGGTGTAG

Protein sequence

MSITSAKEEEICGVIAQKPVPPNSVLNRILGVSHYVGLSPLRILLPPTRHMSYVETHLLYFGFKGCCALSHVYLNCSFQEFGFCFVVKFLLWLV
Homology
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BLAST of Lag0037884 vs. NCBI nr
Match: KAG7037413.1 (hypothetical protein SDJN02_01039, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-08
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0 

Query: 32 VSHYVGLSPLRILLPPTRHMSYVETHLLYFGFKGCCALSHVYL 75
          VSH VGLSPLRIL+PPTR+MS VET LLYFGFKG CALS++ L
Sbjct: 8  VSHCVGLSPLRILVPPTRYMSIVETLLLYFGFKGYCALSYLGL 50

The following BLAST results are available for this feature:
BLAST of Lag0037884 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7037413.12.0e-0879.07hypothetical protein SDJN02_01039, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Lag0037884 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0037884.1Lag0037884.1mRNA