Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGATGGCTAAAAGGGGAAGGTAGTTACCAAACCTCCCAAAAGAAGGCAGAGAACGAGGATATAGAGAGATTGATTGGGCAGGAGGGGTCAGTCTTCACCGATGAGATAATGAGAGGGGAGGTGCCGCACAAATTCAAAGTACCAAACTTCCCGCAGTATGATGGGAAGAAGGATCCGAAACAGCACCTAGATGCATACCAGACTTGGATGGACTTTCATGGGGCGAACGAAGCAACAAGGTGCTGAGATTTTGAACTAATGTTCACAGGTTTAGCAAGGCAGTGGTTTGGCAAGGTCCTGCGAAGGTCAATAGGCTCGTTCAAAGAACTGGCCCGAGCGTTTGTTACGCAATTCCTAGGAGCTCGAAGTCGACAGAAGCCTCAAATCAACTTGCTGACAGTAAAGCAGGGGCCTCGGGAGGGCCTGAGGGATTATATTAACAGATTTAGCAACGAAGTTTTGCAGGTGGAGGGTTACGATGATGGAGTTGCTTTGACTGCTGTGATTTCAGGTTTGTAGGATGAAAGACTACTCAATTCAATTGGAGAGAGCCAACCTCGAACGTACGTGGAGTTCATGACCCGAGCATAAAGATACATAAGCACAGAGGAGCTGTTGAGATCCAAGCAGGAAGAAAGAGAGAGTCGGGGGATGTCAATATCAGACCGGCGTCGGGAATACAGGGGAAAGAGGCACCAGGGTGAGGGAAGAGGCCGGAGCCGACCTGAGCACCCCTCGGCCAATGGCCGATGCCGACCAGAAGCCAAGGAATTGCAAGGTCGTGCGGAGCCTAAGGCCAGATTCGACAGGTATACGCCACTAACAACTTCGCTTGAATAGGTTTTGGTCGCGATACAGGACACAAATCTGTTGAAACACCCAGAAAAGTTGAGATCAGATCCCGACAGGAGAAACATGAACAAATATTGCATGTTCCACGGAGATCACGACCATACAACCAGAGAATGCATCCAGTTACGAGATGAGATAGAAACCCTAATCCGAGAAGGTTACCTCAAGTCCCGGAGTCACCATTTCATGGTCCGGTCTTATGCAAACTCATTGCATAGTATACCCCCGCTCGCATGTCTACTACATGGACGCTTAGGATCAATACGTCTGTATCAAATACAAAGCGGGCCGTATCACATAGTGTTACCAGGATAA
mRNA sequence
ATGTCTGGATGGCTAAAAGGGGAAGGTAGTTACCAAACCTCCCAAAAGAAGGCAGAGAACGAGGATATAGAGAGATTGATTGGGCAGGAGGGGTCAGTCTTCACCGATGAGATAATGAGAGGGGAGGTGCCGCACAAATTCAAAGTACCAAACTTCCCGCAGTATGATGGGAAGAAGGATCCGAAACAGCACCTAGATGCATACCAGACTTGGATGGACTTTCATGGGGCGAACGAAGCAACAAGGTCAATAGGCTCGTTCAAAGAACTGGCCCGAGCGTTTGTTACGCAATTCCTAGGAGCTCGAAGTCGACAGAAGCCTCAAATCAACTTGCTGACAGTAAAGCAGGGGCCTCGGGAGGGCCTGAGGGATTATATTAACAGATTTAGCAACGAAGTTTTGCAGGTGGAGGGTTACGATGATGGAGTTGCTTTGACTGCTGTGATTTCAGAGGAGCTGTTGAGATCCAAGCAGGAAGAAAGAGAGAGTCGGGGGATGTCAATATCAGACCGGCGTCGGGAATACAGGGGAAAGAGGCACCAGGGTGAGGGAAGAGGCCGGAGCCGACCTGAGCACCCCTCGGCCAATGGCCGATGCCGACCAGAAGCCAAGGAATTGCAAGGTCGTGCGGAGCCTAAGGCCAGATTCGACAGGAGAAACATGAACAAATATTGCATGTTCCACGGAGATCACGACCATACAACCAGAGAATGCATCCAGTTACGAGATGAGATAGAAACCCTAATCCGAGAAGGTTACCTCAAGTCCCGGAGTCACCATTTCATGGTCCGGTCTTATGCAAACTCATTGCATAGTATACCCCCGCTCGCATGTCTACTACATGGACGCTTAGGATCAATACGTCTGTATCAAATACAAAGCGGGCCGTATCACATAGTGTTACCAGGATAA
Coding sequence (CDS)
ATGTCTGGATGGCTAAAAGGGGAAGGTAGTTACCAAACCTCCCAAAAGAAGGCAGAGAACGAGGATATAGAGAGATTGATTGGGCAGGAGGGGTCAGTCTTCACCGATGAGATAATGAGAGGGGAGGTGCCGCACAAATTCAAAGTACCAAACTTCCCGCAGTATGATGGGAAGAAGGATCCGAAACAGCACCTAGATGCATACCAGACTTGGATGGACTTTCATGGGGCGAACGAAGCAACAAGGTCAATAGGCTCGTTCAAAGAACTGGCCCGAGCGTTTGTTACGCAATTCCTAGGAGCTCGAAGTCGACAGAAGCCTCAAATCAACTTGCTGACAGTAAAGCAGGGGCCTCGGGAGGGCCTGAGGGATTATATTAACAGATTTAGCAACGAAGTTTTGCAGGTGGAGGGTTACGATGATGGAGTTGCTTTGACTGCTGTGATTTCAGAGGAGCTGTTGAGATCCAAGCAGGAAGAAAGAGAGAGTCGGGGGATGTCAATATCAGACCGGCGTCGGGAATACAGGGGAAAGAGGCACCAGGGTGAGGGAAGAGGCCGGAGCCGACCTGAGCACCCCTCGGCCAATGGCCGATGCCGACCAGAAGCCAAGGAATTGCAAGGTCGTGCGGAGCCTAAGGCCAGATTCGACAGGAGAAACATGAACAAATATTGCATGTTCCACGGAGATCACGACCATACAACCAGAGAATGCATCCAGTTACGAGATGAGATAGAAACCCTAATCCGAGAAGGTTACCTCAAGTCCCGGAGTCACCATTTCATGGTCCGGTCTTATGCAAACTCATTGCATAGTATACCCCCGCTCGCATGTCTACTACATGGACGCTTAGGATCAATACGTCTGTATCAAATACAAAGCGGGCCGTATCACATAGTGTTACCAGGATAA
Protein sequence
MSGWLKGEGSYQTSQKKAENEDIERLIGQEGSVFTDEIMRGEVPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRSIGSFKELARAFVTQFLGARSRQKPQINLLTVKQGPREGLRDYINRFSNEVLQVEGYDDGVALTAVISEELLRSKQEERESRGMSISDRRREYRGKRHQGEGRGRSRPEHPSANGRCRPEAKELQGRAEPKARFDRRNMNKYCMFHGDHDHTTRECIQLRDEIETLIREGYLKSRSHHFMVRSYANSLHSIPPLACLLHGRLGSIRLYQIQSGPYHIVLPG
Homology
BLAST of Lag0037424 vs. NCBI nr
Match:
XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])
HSP 1 Score: 165.6 bits (418), Expect = 6.5e-37
Identity = 119/316 (37.66%), Postives = 156/316 (49.37%), Query Frame = 0
Query: 8 EGSYQTSQKKAENEDIERLIGQEGSVFTDEIMRGEVPHKFKVPNFPQYDGKKDPKQHLDA 67
E S + K + D+E L+ Q S FT+EIMR +VP KFK+P Q+D DP HLDA
Sbjct: 154 ESSEKRHSHKEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDA 213
Query: 68 YQTWMDFHGANEATR----------------------SIGSFKELARAFVTQFLGARSRQ 127
Y+ WMD +G +EA R SI SFK LARAFVTQF+G R R
Sbjct: 214 YREWMDIYGVSEAVRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRS 273
Query: 128 KPQINLLTVKQGPREGLRDYINRFSNEVLQVEGYDDGVALTA------------------ 187
+P LLT+KQ E LRDY+ RF+ E LQVEG D V+L A
Sbjct: 274 RPVAYLLTIKQRTTESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRT 333
Query: 188 --VISEELLRSKQ---------EERESRGMSISDRRREYRGKRHQG---EGRGRSRPEHP 247
SE L R+++ +RE G +D +RE G + QG E R RS + P
Sbjct: 334 PNTFSEALSRAQRYMSAGEFFYSKREPDGKR-TDPKRERSGDKPQGSRWEKRDRSSQKDP 393
Query: 248 SAN-----------GRCRPEAKE---LQGRAEPKARFDRRNMNKYCMFHGDHDHTTRECI 256
+ E K+ L+ KA +R+ +YC+FH DH H T++C
Sbjct: 394 PRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCF 453
BLAST of Lag0037424 vs. NCBI nr
Match:
XP_024041095.1 (uncharacterized protein LOC112098853 [Citrus clementina])
HSP 1 Score: 134.0 bits (336), Expect = 2.1e-27
Identity = 102/329 (31.00%), Postives = 148/329 (44.98%), Query Frame = 0
Query: 8 EGSYQTSQKKAENEDIERLIGQEGSVFTDEIMRGEVPHKFKVPNFPQYDGKKDPKQHLDA 67
E + Q E ++ + + FT +IM + P +F +P YDG++DP +HL+
Sbjct: 151 ERMQRLEQMVREMGPLDDVTAEHEPPFTSDIMVAKYPPRFHLPQMEPYDGQRDPTEHLEL 210
Query: 68 YQTWMDFHGANEA----------------------TRSIGSFKELARAFVTQFLGARSRQ 127
Y+T M+ GA++A SI SF +L+R F + F AR R
Sbjct: 211 YRTLMEVQGASQAILCRAFPLTLVGAARRWFRRLQPHSISSFGDLSREFTSHFRSARQRG 270
Query: 128 KPQINLLTVKQGPREGLRDYINRFSNEVLQVEGYDDGVALTAVI---------------- 187
KP LLTVKQ E LRDYI R++NE+ QV+GYDDG+AL+ ++
Sbjct: 271 KPVTYLLTVKQQEGETLRDYIRRYNNEITQVDGYDDGIALSGIMEGLRMGKLWWSVSKRP 330
Query: 188 ----------------SEELLRSKQEER--ESRGMSISDRRREYRGKR-HQGEGRGRSRP 247
+EE +++ +E+ ++G D +RE R R Q R + RP
Sbjct: 331 PTSYSEMLARAEKYANAEERFKNRNQEKGESTKGKKKKDDQRERRVVRPDQSLRRNQFRP 390
Query: 248 EHPSANGRCRPEA-------KELQGRAEP-----------------KARFDRRNMNKYCM 256
S RP EL E K RRN NKYC
Sbjct: 391 GERSEVRDTRPRLASQFTNFTELNTPREQILMQVRNPTLFRTPPPMKTNPSRRNPNKYCH 450
BLAST of Lag0037424 vs. NCBI nr
Match:
XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])
HSP 1 Score: 126.3 bits (316), Expect = 4.4e-25
Identity = 92/238 (38.66%), Postives = 122/238 (51.26%), Query Frame = 0
Query: 8 EGSYQTSQKKAENEDIERLIGQEGSVFTDEIMRGEVPHKFKVPNFPQYDGKKDPKQHLDA 67
E S + +K + D+E L+GQ S FT+EIMR +VP KFK+P +DG +P HLDA
Sbjct: 59 ESSEKRHNQKEKGFDLEELLGQADSPFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDA 118
Query: 68 YQTWMDFHGANEATR----------------------SIGSFKELARAFVTQFLGARSRQ 127
Y+ WMD +G ++A R SI SFK LARAF+TQF+G R R
Sbjct: 119 YREWMDIYGVSDAIRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFMTQFVGGRCRS 178
Query: 128 KPQINLLTVKQGPREGLRDYINRFSNEVLQVEGYDDGVALTAVIS---EELLR------- 187
+P LLT+KQ E L DY+ RF+ E LQ+EG D V+L A +S +E L
Sbjct: 179 RPVAYLLTIKQRTAESLHDYVARFNEEKLQLEGLTDAVSLLAFMSGVRDEHLSFSFEKRT 238
Query: 188 ----SKQEERESRGMSISD---RRREYRGKR-HQGEGRGRSRPEHPSANGRCRPEAKE 206
S+ R R MS S+ +RE GKR Q R +P+ R R K+
Sbjct: 239 PSTFSEALSRAQRYMSASEFCYSKREPDGKRTDQKRERSGDKPQGSRWEKRDRGSQKD 296
BLAST of Lag0037424 vs. NCBI nr
Match:
XP_024024428.1 (uncharacterized protein LOC112092448 [Morus notabilis])
HSP 1 Score: 121.7 bits (304), Expect = 1.1e-23
Identity = 87/277 (31.41%), Postives = 125/277 (45.13%), Query Frame = 0
Query: 34 FTDEIMRGEVPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEAT------------ 93
FT+ I+R +P K+K P P YDG+ DP HL+ Y M +G E
Sbjct: 40 FTENIIRVPLPDKYKSPPIPLYDGRSDPDDHLEVYTGHMVLYGYPEEVMCRTFRNHLSDS 99
Query: 94 ----------RSIGSFKELARAFVTQFLGARSRQKPQINLLTVKQGPREGLRDYINRFSN 153
SI S+ +L F+TQF+G + P+ NL V QGP E L+D+I RF
Sbjct: 100 ARRWFRSLKPNSITSWDDLKNDFLTQFIGVKKYIPPKQNLSRVYQGPNESLKDWIARFGE 159
Query: 154 EVLQVEGYDDGVALTAVIS---------------------------EELLRSKQEERESR 213
+V EG D VAL +S + + +++ ++ +
Sbjct: 160 QVTATEGISDEVALMGALSSMKKDIPYSTDLGRRPPHAYQEFLTRAQGFINAEEAKKALK 219
Query: 214 GMSISDRRREYR-------GKRHQGEGRGRSRPEHPSANGRCRPEAKELQGRAEPKARFD 255
+ + + E R GK+H+G + ++ P H R P +++P
Sbjct: 220 SKAATPAKEEVRQASSQNNGKKHRGPPQVQAEPSHLQVLRRPPPL------KSDPA---- 279
BLAST of Lag0037424 vs. NCBI nr
Match:
XP_030955724.1 (uncharacterized protein LOC115977839 [Quercus lobata])
HSP 1 Score: 119.8 bits (299), Expect = 4.1e-23
Identity = 92/297 (30.98%), Postives = 135/297 (45.45%), Query Frame = 0
Query: 23 IERLIGQEGSVFTDEIMRGEVPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANE--- 82
IE L+ + S FT I +P KFK+P+ YDG +DP H+ ++T M G +
Sbjct: 21 IEDLVHRTDSPFTASINGHPLPSKFKLPSLDSYDGTRDPFDHIATFKTTMHLQGVPDEIM 80
Query: 83 -------------------ATRSIGSFKELARAFVTQFLGARSRQKPQINLLTVKQGPRE 142
S+ SF+EL++ FV F+G + ++ +LLT++QG E
Sbjct: 81 CRAFPTTLKGPARVWFSKIPPSSVSSFEELSKLFVNNFIGGQRHKRSSSSLLTIEQGENE 140
Query: 143 GLRDYINRFSNEVLQVEGYDDGVALTAV---ISEELLRSKQEERESRGMSISDRRREYRG 202
LR +I RF+ E L V+ DD + L A I+ +L K E+E + M+ R+R R
Sbjct: 141 SLRSFITRFNREALSVDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELKRKRAERM 200
Query: 203 KRH----------QGEGRGRSRPEHPSAN----GRCR----------------PEAKELQ 262
+ H +GR R E GR + + L+
Sbjct: 201 EAHPVRHSEQAPRPKKGRTEDRKERDGRKTGPLGRSQNYTPLNAPLNQVLMQIKDDPSLK 260
Query: 263 GRAEPKARFDRRNMNKYCMFHGDHDHTTRECIQLRDEIETLIREGYLKSRSHHFMVR 265
+ K ++RN NKYC FH DH H T EC L+ +IE LIR+G LK HF+ R
Sbjct: 261 WPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLK----HFVGR 313
BLAST of Lag0037424 vs. ExPASy TrEMBL
Match:
A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 3.2e-37
Identity = 119/316 (37.66%), Postives = 156/316 (49.37%), Query Frame = 0
Query: 8 EGSYQTSQKKAENEDIERLIGQEGSVFTDEIMRGEVPHKFKVPNFPQYDGKKDPKQHLDA 67
E S + K + D+E L+ Q S FT+EIMR +VP KFK+P Q+D DP HLDA
Sbjct: 154 ESSEKRHSHKEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDA 213
Query: 68 YQTWMDFHGANEATR----------------------SIGSFKELARAFVTQFLGARSRQ 127
Y+ WMD +G +EA R SI SFK LARAFVTQF+G R R
Sbjct: 214 YREWMDIYGVSEAVRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRS 273
Query: 128 KPQINLLTVKQGPREGLRDYINRFSNEVLQVEGYDDGVALTA------------------ 187
+P LLT+KQ E LRDY+ RF+ E LQVEG D V+L A
Sbjct: 274 RPVAYLLTIKQRTTESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRT 333
Query: 188 --VISEELLRSKQ---------EERESRGMSISDRRREYRGKRHQG---EGRGRSRPEHP 247
SE L R+++ +RE G +D +RE G + QG E R RS + P
Sbjct: 334 PNTFSEALSRAQRYMSAGEFFYSKREPDGKR-TDPKRERSGDKPQGSRWEKRDRSSQKDP 393
Query: 248 SAN-----------GRCRPEAKE---LQGRAEPKARFDRRNMNKYCMFHGDHDHTTRECI 256
+ E K+ L+ KA +R+ +YC+FH DH H T++C
Sbjct: 394 PRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCF 453
BLAST of Lag0037424 vs. ExPASy TrEMBL
Match:
A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)
HSP 1 Score: 126.3 bits (316), Expect = 2.1e-25
Identity = 92/238 (38.66%), Postives = 122/238 (51.26%), Query Frame = 0
Query: 8 EGSYQTSQKKAENEDIERLIGQEGSVFTDEIMRGEVPHKFKVPNFPQYDGKKDPKQHLDA 67
E S + +K + D+E L+GQ S FT+EIMR +VP KFK+P +DG +P HLDA
Sbjct: 59 ESSEKRHNQKEKGFDLEELLGQADSPFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDA 118
Query: 68 YQTWMDFHGANEATR----------------------SIGSFKELARAFVTQFLGARSRQ 127
Y+ WMD +G ++A R SI SFK LARAF+TQF+G R R
Sbjct: 119 YREWMDIYGVSDAIRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFMTQFVGGRCRS 178
Query: 128 KPQINLLTVKQGPREGLRDYINRFSNEVLQVEGYDDGVALTAVIS---EELLR------- 187
+P LLT+KQ E L DY+ RF+ E LQ+EG D V+L A +S +E L
Sbjct: 179 RPVAYLLTIKQRTAESLHDYVARFNEEKLQLEGLTDAVSLLAFMSGVRDEHLSFSFEKRT 238
Query: 188 ----SKQEERESRGMSISD---RRREYRGKR-HQGEGRGRSRPEHPSANGRCRPEAKE 206
S+ R R MS S+ +RE GKR Q R +P+ R R K+
Sbjct: 239 PSTFSEALSRAQRYMSASEFCYSKREPDGKRTDQKRERSGDKPQGSRWEKRDRGSQKD 296
BLAST of Lag0037424 vs. ExPASy TrEMBL
Match:
A0A7J0FPQ8 (Ribonuclease H OS=Actinidia rufa OX=165716 GN=Acr_14g0001790 PE=4 SV=1)
HSP 1 Score: 118.6 bits (296), Expect = 4.4e-23
Identity = 87/281 (30.96%), Postives = 130/281 (46.26%), Query Frame = 0
Query: 23 IERLIGQEGSVFTDEIMRGEVPHKFKVP-NFPQYDGKKDPKQHLDAYQTWMDFHGANE-- 82
++ L+ Q FT+ ++R + KFK+P Y+GK DP HLD+Y++ M G ++
Sbjct: 168 VDALVRQTDPPFTERVLRTRISSKFKLPTQLGIYEGKTDPMDHLDSYKSLMSLQGCSDEV 227
Query: 83 --------------------ATRSIGSFKELARAFVTQFLGARSRQKPQINLLTVKQGPR 142
+ ++ SF EL+R FV F+ R+RQK +L TV Q
Sbjct: 228 MCEAFSATLKGPARSWFRKLSPGTVDSFGELSRLFVANFMSCRNRQKNASHLFTVHQKET 287
Query: 143 EGLRDYINRFSNEVLQVEG-YDDGVALTAVISEELLRSKQEER---ESRGMSISDRRREY 202
E L+D++ RF+ VL VE D A + +EEL +K+ R + + RR +Y
Sbjct: 288 ESLKDFVKRFNQAVLDVEDPSDKSKADKYIAAEELAEAKRRRRGKEDHKRKEPDTRRVDY 347
Query: 203 ----------RGKRHQGEGRGRSRPEHPSAN--------GRCRPEAKE---LQGRAEPKA 256
R + R R+ P P N + E K ++ + K
Sbjct: 348 REEMRYKKPNRDSKRSNNRRPRTPPRRPEFNLPSLNTPVAQVLSEIKHEKFIKWPGKIKT 407
BLAST of Lag0037424 vs. ExPASy TrEMBL
Match:
A0A2N9EW93 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6965 PE=4 SV=1)
HSP 1 Score: 118.6 bits (296), Expect = 4.4e-23
Identity = 89/291 (30.58%), Postives = 137/291 (47.08%), Query Frame = 0
Query: 12 QTSQKKAENEDIERLIGQEGSVFTDEIMRGEVPHKFKVPNFPQYDGKKDPKQHLDAYQTW 71
Q K A+N D+ L+ + S FT I +P KFKVP +DG KDP +LD+++T
Sbjct: 96 QVKAKAAKNLDM--LVHRSESPFTKRIDEYPLPAKFKVPQLETFDGFKDPLDYLDSFRTI 155
Query: 72 MDFHGANE----------------------ATRSIGSFKELARAFVTQFLGARSRQKPQI 131
M HG ++ T SI +F +L+RAF+ F+G R +P
Sbjct: 156 MRLHGVSDEIMCRTFPTNLRGSARTWFNQLETGSIDTFAQLSRAFIDNFIGGRRSARPAN 215
Query: 132 NLLTVKQGPREGLRDYINRFSNEVLQVEGYDDGVALTAV--------------------I 191
LL ++Q E LR Y+ RF+ E +Q++ ++ VALTA +
Sbjct: 216 YLLNIRQREGESLRSYVQRFNKEAVQIDEPNEYVALTAFNAGLLKGDFLFQLCKDPPKSM 275
Query: 192 SEELLRSK-----QEERESRGMSISDRRREYRGKRHQGEGRGRSRPEHPSANGR-CRPEA 251
SE + ++ ++ E+R +S +R+E +R S+ ++P +
Sbjct: 276 SELMYEAQKFINAEDAFEARDEFLSRKRKEPEDRRFDSSRNKSSKQDYPKTERKNASSSN 335
Query: 252 KELQGRAEPKARFDRRNMNKYCMFHGDHDHTTRECIQLRDEIETLIREGYL 255
+ QG R D RN+ YC FH DH HTT +C L+ +IE LIR+G L
Sbjct: 336 RRGQGSFVQTRRRDLRNL--YCRFHRDHGHTTEDCFALKQQIEALIRQGKL 382
BLAST of Lag0037424 vs. ExPASy TrEMBL
Match:
A0A1R3I5P8 (Retrotransposon gag protein OS=Corchorus olitorius OX=93759 GN=COLO4_24943 PE=4 SV=1)
HSP 1 Score: 118.2 bits (295), Expect = 5.8e-23
Identity = 86/282 (30.50%), Postives = 133/282 (47.16%), Query Frame = 0
Query: 22 DIERLIGQEGSVFTDEIMRGEVPHKFKVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEAT 81
D++ L E S FT+EI R + P F++P YDG DP HL+ ++T M GA++
Sbjct: 132 DVDELRLLETSPFTEEIDRAQPPKGFRMPVIEAYDGTSDPFDHLELFRTNMLIQGADDPL 191
Query: 82 RSIGSFKELARAFVTQFLGARSRQKPQINLLTVKQGPREGLRDYINRFSNEVLQVEGYDD 141
SI SFKEL ++F+T F+ +R +K + L+ ++ P E LRDY+ RF+ E LQV+ +
Sbjct: 192 ISISSFKELGQSFLTHFISSRRAKKTSLGLMNIRHRPNESLRDYVMRFNAEALQVKDLEQ 251
Query: 142 GVALTAVIS----------------------EELLRSKQEERESRGMSISDRRREYR--- 201
VA+ A+++ E LLR+++ M++ + ++R
Sbjct: 252 SVAVAALMNGLRDDEFQLKFFLSKKTPKTLLELLLRAEKYINTEENMAVKIEKNDHRNDK 311
Query: 202 -----------GKRHQGEG--RGRSRPEH----------PSANGRCRPEAKELQGRAEPK 256
GKR G G PE P A + E L +P
Sbjct: 312 KRGREVEADQGGKRFSKTGGYSGARSPERKYDNYTPLNAPRARILMQIERDPLLKWPKPM 371
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DWY0 | 3.2e-37 | 37.66 | uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1E1E7 | 2.1e-25 | 38.66 | uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A7J0FPQ8 | 4.4e-23 | 30.96 | Ribonuclease H OS=Actinidia rufa OX=165716 GN=Acr_14g0001790 PE=4 SV=1 | [more] |
A0A2N9EW93 | 4.4e-23 | 30.58 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6965 PE=4 SV=1 | [more] |
A0A1R3I5P8 | 5.8e-23 | 30.50 | Retrotransposon gag protein OS=Corchorus olitorius OX=93759 GN=COLO4_24943 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |