Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATTTCAACCATTTCCATTCCCTTAAAATGGTTTTCCAAAACCAATTTCAAGCTCAACTTCCCTCGCCTCCACTCCAAGCACAAACCCACCACGTCGTCTAAACCTCCTCCACTGCCCCTCACCGCGGCGCCACCGTTTGCCGAAGCAGCCTTCCGCCACCTCGATGCTGATGGAGACGGCAAAATCTCCAGCGACGAGCTCCGATCCTACTTCGCATCGATTGGTGAGTACATGACAGGCGACGATGCTCGAGGCGTGATTGGAGACTACGACGGCGATGGAGACGAGCTACTCGAGCTTCGAGATTTCGAGCGGTTGATAAAGGCGGAGGAGGAGGAAGAAGAGAAGGAGGATTTGAAAATGGCTTTTGAGATGTTTGAAGTTGAGAAGGGATGTGGATTCATCGGAGCGGCGGGATTGCAGAAGATGTTTGGGCGGCTTGGGTACGTGAAATCCAAAGAGGAGTGCATGGCTATGATCGGAGTGTTTGACGTTGACGGCGACGGCGTAATTGATTATCGTGAATTTCTCAGAATGATGACGGCCTAA
mRNA sequence
ATGGCCATTTCAACCATTTCCATTCCCTTAAAATGGTTTTCCAAAACCAATTTCAAGCTCAACTTCCCTCGCCTCCACTCCAAGCACAAACCCACCACGTCGTCTAAACCTCCTCCACTGCCCCTCACCGCGGCGCCACCGTTTGCCGAAGCAGCCTTCCGCCACCTCGATGCTGATGGAGACGGCAAAATCTCCAGCGACGAGCTCCGATCCTACTTCGCATCGATTGGTGAGTACATGACAGGCGACGATGCTCGAGGCGTGATTGGAGACTACGACGGCGATGGAGACGAGCTACTCGAGCTTCGAGATTTCGAGCGGTTGATAAAGGCGGAGGAGGAGGAAGAAGAGAAGGAGGATTTGAAAATGGCTTTTGAGATGTTTGAAGTTGAGAAGGGATGTGGATTCATCGGAGCGGCGGGATTGCAGAAGATGTTTGGGCGGCTTGGGTACGTGAAATCCAAAGAGGAGTGCATGGCTATGATCGGAGTGTTTGACGTTGACGGCGACGGCGTAATTGATTATCGTGAATTTCTCAGAATGATGACGGCCTAA
Coding sequence (CDS)
ATGGCCATTTCAACCATTTCCATTCCCTTAAAATGGTTTTCCAAAACCAATTTCAAGCTCAACTTCCCTCGCCTCCACTCCAAGCACAAACCCACCACGTCGTCTAAACCTCCTCCACTGCCCCTCACCGCGGCGCCACCGTTTGCCGAAGCAGCCTTCCGCCACCTCGATGCTGATGGAGACGGCAAAATCTCCAGCGACGAGCTCCGATCCTACTTCGCATCGATTGGTGAGTACATGACAGGCGACGATGCTCGAGGCGTGATTGGAGACTACGACGGCGATGGAGACGAGCTACTCGAGCTTCGAGATTTCGAGCGGTTGATAAAGGCGGAGGAGGAGGAAGAAGAGAAGGAGGATTTGAAAATGGCTTTTGAGATGTTTGAAGTTGAGAAGGGATGTGGATTCATCGGAGCGGCGGGATTGCAGAAGATGTTTGGGCGGCTTGGGTACGTGAAATCCAAAGAGGAGTGCATGGCTATGATCGGAGTGTTTGACGTTGACGGCGACGGCGTAATTGATTATCGTGAATTTCTCAGAATGATGACGGCCTAA
Protein sequence
MAISTISIPLKWFSKTNFKLNFPRLHSKHKPTTSSKPPPLPLTAAPPFAEAAFRHLDADGDGKISSDELRSYFASIGEYMTGDDARGVIGDYDGDGDELLELRDFERLIKAEEEEEEKEDLKMAFEMFEVEKGCGFIGAAGLQKMFGRLGYVKSKEECMAMIGVFDVDGDGVIDYREFLRMMTA
Homology
BLAST of Lag0036873 vs. NCBI nr
Match:
XP_022974919.1 (probable calcium-binding protein CML41 [Cucurbita maxima])
HSP 1 Score: 291.2 bits (744), Expect = 6.3e-75
Identity = 151/185 (81.62%), Postives = 159/185 (85.95%), Query Frame = 0
Query: 1 MAISTISIPLKWFSKTNFKLNFPRLHSKHKPTTSSKPPP--LPLTAAPPFAEAAFRHLDA 60
MA+S IS P KWFS TNFKLNFPRL KHKPT S+ PPP L LT APP AEAAFRHLDA
Sbjct: 15 MALSPISTPFKWFSNTNFKLNFPRLRFKHKPTPSNPPPPPLLLLTPAPPLAEAAFRHLDA 74
Query: 61 DGDGKISSDELRSYFASIGEYMTGDDARGVIGDYDGDGDELLELRDFERLIKAEEEEEEK 120
DGDGKIS DEL+SYFAS+GEYMT DDAR +I ++DGDGD LLEL DFERL+K EEEEK
Sbjct: 75 DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKG-GEEEEK 134
Query: 121 EDLKMAFEMFEVEKGCGFIGAAGLQKMFGRLGYVKSKEECMAMIGVFDVDGDGVIDYREF 180
EDLKMAFEMFE EKGCGFIG GLQKMFGRLGYVKS EECMAMIGVFDVDGDGVIDYREF
Sbjct: 135 EDLKMAFEMFEGEKGCGFIGPPGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREF 194
Query: 181 LRMMT 184
LRMMT
Sbjct: 195 LRMMT 198
BLAST of Lag0036873 vs. NCBI nr
Match:
KAG6591338.1 (putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 286.2 bits (731), Expect = 2.0e-73
Identity = 149/185 (80.54%), Postives = 157/185 (84.86%), Query Frame = 0
Query: 1 MAISTISIPLKWFSKTNFKLNFPRLHSKHKPTTSSKPPP--LPLTAAPPFAEAAFRHLDA 60
MA+S IS P KWFS TN KLN PRL KHKPT S+ PPP L LT APP AEAAFRHLDA
Sbjct: 1 MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60
Query: 61 DGDGKISSDELRSYFASIGEYMTGDDARGVIGDYDGDGDELLELRDFERLIKAEEEEEEK 120
DGDGKIS DEL+SYFAS+GEYMT DDAR +I ++DGDGD LLEL DFERL+K EEEEK
Sbjct: 61 DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKG-GEEEEK 120
Query: 121 EDLKMAFEMFEVEKGCGFIGAAGLQKMFGRLGYVKSKEECMAMIGVFDVDGDGVIDYREF 180
EDLK AFEMFE EKGCGFIG AGLQKMFGRLGYVKS EECMAMIGVFDVDGDGVIDYREF
Sbjct: 121 EDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREF 180
Query: 181 LRMMT 184
LRMMT
Sbjct: 181 LRMMT 184
BLAST of Lag0036873 vs. NCBI nr
Match:
XP_023535419.1 (calmodulin-like protein 2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 285.4 bits (729), Expect = 3.4e-73
Identity = 148/185 (80.00%), Postives = 157/185 (84.86%), Query Frame = 0
Query: 1 MAISTISIPLKWFSKTNFKLNFPRLHSKHKPTTSSKPPP--LPLTAAPPFAEAAFRHLDA 60
MA+S +S P KWFS TNF LNFPRL KHKPT S+ PPP L LT APP AEAAFRHLDA
Sbjct: 38 MALSPVSTPFKWFSNTNFNLNFPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 97
Query: 61 DGDGKISSDELRSYFASIGEYMTGDDARGVIGDYDGDGDELLELRDFERLIKAEEEEEEK 120
DGDGKIS DEL+SYFAS+GEYMT DDAR +I ++D DGD LLEL DFERL+K EEEEK
Sbjct: 98 DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDWDGDLLLELGDFERLVKG-GEEEEK 157
Query: 121 EDLKMAFEMFEVEKGCGFIGAAGLQKMFGRLGYVKSKEECMAMIGVFDVDGDGVIDYREF 180
EDLK AFEMFE EKGCGFIG AGLQKMFGRLGYVKS EECMAMIGVFDVDGDGVIDYREF
Sbjct: 158 EDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREF 217
Query: 181 LRMMT 184
LRMMT
Sbjct: 218 LRMMT 221
BLAST of Lag0036873 vs. NCBI nr
Match:
KAG7024217.1 (putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 284.6 bits (727), Expect = 5.9e-73
Identity = 148/185 (80.00%), Postives = 157/185 (84.86%), Query Frame = 0
Query: 1 MAISTISIPLKWFSKTNFKLNFPRLHSKHKPTTSSKPPP--LPLTAAPPFAEAAFRHLDA 60
MA+S IS P KWFS TN KLN PRL KHKPT S+ PPP L LT APP AEAAFRHLDA
Sbjct: 1 MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60
Query: 61 DGDGKISSDELRSYFASIGEYMTGDDARGVIGDYDGDGDELLELRDFERLIKAEEEEEEK 120
DGDGKIS DEL+SYFAS+GEYMT D+AR +I ++DGDGD LLEL DFERL+K EEEEK
Sbjct: 61 DGDGKISGDELQSYFASVGEYMTRDNARSLIREFDGDGDLLLELGDFERLVKG-GEEEEK 120
Query: 121 EDLKMAFEMFEVEKGCGFIGAAGLQKMFGRLGYVKSKEECMAMIGVFDVDGDGVIDYREF 180
EDLK AFEMFE EKGCGFIG AGLQKMFGRLGYVKS EECMAMIGVFDVDGDGVIDYREF
Sbjct: 121 EDLKRAFEMFEEEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREF 180
Query: 181 LRMMT 184
LRMMT
Sbjct: 181 LRMMT 184
BLAST of Lag0036873 vs. NCBI nr
Match:
XP_008466624.1 (PREDICTED: probable calcium-binding protein CML41 [Cucumis melo] >KAA0055432.1 putative calcium-binding protein CML41 [Cucumis melo var. makuwa])
HSP 1 Score: 283.9 bits (725), Expect = 1.0e-72
Identity = 146/183 (79.78%), Postives = 154/183 (84.15%), Query Frame = 0
Query: 1 MAISTISIPLKWFSKTNFKLNFPRLHSKHKPTTSSKPPPLPLTAAPPFAEAAFRHLDADG 60
MAISTI+IP KWF+KTNFKLNFP LHSKHKP +S P P PP AE AFRHLD DG
Sbjct: 1 MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTP------PPLAEVAFRHLDIDG 60
Query: 61 DGKISSDELRSYFASIGEYMTGDDARGVIGDYDGDGDELLELRDFERLIKAEEEEEEKED 120
DGKIS DELRSYFASIGEYMT D A+ VIGD+D DGDELLEL DFERL+K EEEE+E ED
Sbjct: 61 DGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQE-ED 120
Query: 121 LKMAFEMFEVEKGCGFIGAAGLQKMFGRLGYVKSKEECMAMIGVFDVDGDGVIDYREFLR 180
LK AFEMFE EKGCGFIGA GLQKMFGRLGYVKSKE+CM MI VFDVDGDGVIDY EFLR
Sbjct: 121 LKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLR 176
Query: 181 MMT 184
MMT
Sbjct: 181 MMT 176
BLAST of Lag0036873 vs. ExPASy Swiss-Prot
Match:
Q8L3R2 (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2)
HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26
Identity = 77/191 (40.31%), Postives = 104/191 (54.45%), Query Frame = 0
Query: 11 KWFSKTNFKLNFPRLHSKHKP-TTSSKPPPLPLT------------AAPPFAEAAFRHLD 70
KWFS KLN + + P + SS P + A+ F H D
Sbjct: 14 KWFSTKTLKLNLSFQNRRRSPKSNSSSTLNSPRSNSDDNNNIKSHQASKEELRQVFSHFD 73
Query: 71 ADGDGKISSDELRSYFASIGEYMTGDDARGVIGDYDGDGDELLELRDF-----ERLIKAE 130
+DGDGKIS+ ELR YF S+GEY++ + A+ I + D D D L DF R + +
Sbjct: 74 SDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMTRRDLYGD 133
Query: 131 EEEEEKEDLKMAFEMFEVEKGCGFIGAAGLQKMFGRLGYVKSKEECMAMIGVFDVDGDGV 184
E + +LK AFEMFEVEKG G I GLQKM +LG ++ EC AMI +D+DG+G+
Sbjct: 134 GEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYDIDGNGI 193
BLAST of Lag0036873 vs. ExPASy Swiss-Prot
Match:
Q9SRE6 (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1)
HSP 1 Score: 98.2 bits (243), Expect = 1.0e-19
Identity = 50/133 (37.59%), Postives = 85/133 (63.91%), Query Frame = 0
Query: 50 EAAFRHLDADGDGKISSDELRSYFASIGEYMTGDDARGVIGDYDGDGDELLELRDFERLI 109
EA F ++DA+ DG+IS +EL+ F ++GE ++ ++A + D DGD +L+ +F +LI
Sbjct: 45 EAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI 104
Query: 110 KAEEEEEEKEDLKMAFEMFEVEKGCGFIGAAGLQKMFGRLGYVKSKEECMAMIGVFDVDG 169
K ++EEE+K +LK AF ++ + +G I L+ M +LG ++ ++C MI FD++
Sbjct: 105 KVDDEEEKKMELKGAFRLY-IAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNA 164
Query: 170 DGVIDYREFLRMM 183
DGV+ + EF MM
Sbjct: 165 DGVLSFDEFALMM 176
BLAST of Lag0036873 vs. ExPASy Swiss-Prot
Match:
Q8RYK0 (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 GN=CML31 PE=2 SV=1)
HSP 1 Score: 92.4 bits (228), Expect = 5.6e-18
Identity = 61/146 (41.78%), Postives = 88/146 (60.27%), Query Frame = 0
Query: 44 AAPPFAEAAFRHLDADGDGKISSDELRSYF-ASIGEYMTGDDARGVIGDYDGDGDELLEL 103
A+P + A F D DGDG+IS+ ELR ++GE ++ ++A ++ D DGD LL
Sbjct: 7 ASPCESSALFATFDHDGDGRISAAELRLCMKTTLGEEVSDEEAGQLVASVDADGDGLLCE 66
Query: 104 RDFERLIKAEEEEEEKE----DLKMAFEMFEVEKGCGFIGAAGLQKMFGRLGYVKSKEEC 163
+F RL++A E EEE E L+ AF M+E+E G G I L++M RLG + ++C
Sbjct: 67 AEFVRLVQAAEVEEEDERRGTGLREAFGMYEME-GEGCITPTSLRRMLRRLGSDQDIDDC 126
Query: 164 MAMIGVFDVDGDGVIDYREFLRMMTA 185
AMI FD++GDGV+ + EF MM A
Sbjct: 127 RAMICRFDLNGDGVLSFDEFKIMMNA 151
BLAST of Lag0036873 vs. ExPASy Swiss-Prot
Match:
Q9SRE7 (Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 2.1e-17
Identity = 50/136 (36.76%), Postives = 82/136 (60.29%), Query Frame = 0
Query: 50 EAAFRHLDADGDGKISSDELRSYFASIGEYMTGDDARGVIGDYDGDGDELLELRDFERLI 109
EA F ++DA+ DG+IS++EL+ F ++GE M+ ++A + D DGD +L++ +F LI
Sbjct: 24 EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83
Query: 110 KAEE---EEEEKEDLKMAFEMFEVEKGCGFIGAAGLQKMFGRLGYVKSKEECMAMIGVFD 169
K + EEE+K + AF M+ + G I L+ M +LG ++ ++C MI FD
Sbjct: 84 KGNDEFTEEEKKRKIMEAFRMY-IADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFD 143
Query: 170 VDGDGVIDYREFLRMM 183
++ DGV+ + EF MM
Sbjct: 144 LNADGVLSFDEFALMM 158
BLAST of Lag0036873 vs. ExPASy Swiss-Prot
Match:
O22845 (Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2)
HSP 1 Score: 88.6 bits (218), Expect = 8.1e-17
Identity = 63/182 (34.62%), Postives = 94/182 (51.65%), Query Frame = 0
Query: 9 PLKWFSKTNFKLNFPRLHSKHKPTTSSKPPPLPLTAAPPFAEAAFRHLDADGDGKISSDE 68
PL WF KT K N P S P+ SS P P + F+ D +GDG+I+ +E
Sbjct: 28 PLSWFDKTLHK-NSPPSPSTMLPSPSSSSAPTK-RIDPSELKRVFQMFDKNGDGRITKEE 87
Query: 69 LRSYFASIGEYMTGDDARGVIGDYDGDGDELLELRDFERLIKA------EEEEEEKEDLK 128
L ++G Y+ D +I D +GD +++ +FE L + + E E+ED+K
Sbjct: 88 LNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFESLYSSIVDEHHNDGETEEEDMK 147
Query: 129 MAFEMFEVEKGCGFIGAAGLQKMFGRLGYVKSK--EECMAMIGVFDVDGDGVIDYREFLR 183
AF +F+ + G GFI L+ + LG + K + C MI D DGDG ++Y+EFL+
Sbjct: 148 DAFNVFD-QDGDGFITVEELKSVMASLGLKQGKTLDGCKKMIMQVDADGDGRVNYKEFLQ 206
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022974919.1 | 6.3e-75 | 81.62 | probable calcium-binding protein CML41 [Cucurbita maxima] | [more] |
KAG6591338.1 | 2.0e-73 | 80.54 | putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. s... | [more] |
XP_023535419.1 | 3.4e-73 | 80.00 | calmodulin-like protein 2 [Cucurbita pepo subsp. pepo] | [more] |
KAG7024217.1 | 5.9e-73 | 80.00 | putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. a... | [more] |
XP_008466624.1 | 1.0e-72 | 79.78 | PREDICTED: probable calcium-binding protein CML41 [Cucumis melo] >KAA0055432.1 p... | [more] |
Match Name | E-value | Identity | Description | |
Q8L3R2 | 1.1e-26 | 40.31 | Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 ... | [more] |
Q9SRE6 | 1.0e-19 | 37.59 | Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1 | [more] |
Q8RYK0 | 5.6e-18 | 41.78 | Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 ... | [more] |
Q9SRE7 | 2.1e-17 | 36.76 | Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1 | [more] |
O22845 | 8.1e-17 | 34.62 | Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2 | [more] |