Lag0036842 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGTGGCAAGGTTTGATATTGACAAATTTGATGGGAAAGGAGACTTTGATCTCTGGAAGGCAAAGATAAAGGCAATCCTTGGACAACAGAAAGCCTTACATGCCCTAACTGACCCGTCAAAGCTACCTGCCACAGTAACTGAAGGAGATCTTGAAACTATGAATATGACAGCTTATGGGACGATTATTCTGAATCTCAGCAACAGTGTCTTAAGACAAGTGATTGATGAAGAAACTCCTCAAAAGATATGGAAGAAGCTCAACGAATTGTATGAGGTAAAAGATGCTCATAATAAGATGTATATGAGAGAGAAGTTTTTTTACCTTCAAGATGGATCCGGCTAA ATGGTTGTGGCAAGGTTTGATATTGACAAATTTGATGGGAAAGGAGACTTTGATCTCTGGAAGGCAAAGATAAAGGCAATCCTTGGACAACAGAAAGCCTTACATGCCCTAACTGACCCGTCAAAGCTACCTGCCACAGTAACTGAAGGAGATCTTGAAACTATGAATATGACAGCTTATGGGACGATTATTCTGAATCTCAGCAACAGTGTCTTAAGACAAGTGATTGATGAAGAAACTCCTCAAAAGATATGGAAGAAGCTCAACGAATTGTATGAGGTAAAAGATGCTCATAATAAGATGTATATGAGAGAGAAGTTTTTTTACCTTCAAGATGGATCCGGCTAA ATGGTTGTGGCAAGGTTTGATATTGACAAATTTGATGGGAAAGGAGACTTTGATCTCTGGAAGGCAAAGATAAAGGCAATCCTTGGACAACAGAAAGCCTTACATGCCCTAACTGACCCGTCAAAGCTACCTGCCACAGTAACTGAAGGAGATCTTGAAACTATGAATATGACAGCTTATGGGACGATTATTCTGAATCTCAGCAACAGTGTCTTAAGACAAGTGATTGATGAAGAAACTCCTCAAAAGATATGGAAGAAGCTCAACGAATTGTATGAGGTAAAAGATGCTCATAATAAGATGTATATGAGAGAGAAGTTTTTTTACCTTCAAGATGGATCCGGCTAA MVVARFDIDKFDGKGDFDLWKAKIKAILGQQKALHALTDPSKLPATVTEGDLETMNMTAYGTIILNLSNSVLRQVIDEETPQKIWKKLNELYEVKDAHNKMYMREKFFYLQDGSG Homology
BLAST of Lag0036842 vs. NCBI nr
Match: XP_038880370.1 (uncharacterized protein LOC120072018 [Benincasa hispida]) HSP 1 Score: 134.4 bits (337), Expect = 6.1e-28 Identity = 62/108 (57.41%), Postives = 84/108 (77.78%), Query Frame = 0
BLAST of Lag0036842 vs. NCBI nr
Match: XP_038890043.1 (uncharacterized protein LOC120079747 [Benincasa hispida]) HSP 1 Score: 131.7 bits (330), Expect = 4.0e-27 Identity = 60/108 (55.56%), Postives = 83/108 (76.85%), Query Frame = 0
BLAST of Lag0036842 vs. NCBI nr
Match: XP_038889933.1 (uncharacterized protein LOC120079695 [Benincasa hispida]) HSP 1 Score: 129.8 bits (325), Expect = 1.5e-26 Identity = 60/108 (55.56%), Postives = 83/108 (76.85%), Query Frame = 0
BLAST of Lag0036842 vs. NCBI nr
Match: XP_038887098.1 (uncharacterized protein LOC120077280 [Benincasa hispida]) HSP 1 Score: 129.4 bits (324), Expect = 2.0e-26 Identity = 62/108 (57.41%), Postives = 84/108 (77.78%), Query Frame = 0
BLAST of Lag0036842 vs. NCBI nr
Match: XP_038889301.1 (uncharacterized protein LOC120079211 [Benincasa hispida]) HSP 1 Score: 126.3 bits (316), Expect = 1.7e-25 Identity = 59/108 (54.63%), Postives = 82/108 (75.93%), Query Frame = 0
BLAST of Lag0036842 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.1e-11 Identity = 35/111 (31.53%), Postives = 61/111 (54.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|