Lag0035487 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035487
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr3: 22447421 .. 22448956 (-)
RNA-Seq ExpressionLag0035487
SyntenyLag0035487
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAAGGAGGCGTTTTCCGGCGCGATTTTAGGAGCCTTGGTCGGAATGGTCAATCTTCGGCGAAATCTTTGTAATTCTATTTGGGTGGAGTTCTAGCTATCAGTAGATATGTGGTGGCGGTTTTTATTTTTTCTTCAAGACGTTTTCGAATCTGGAGGATTCCTTCAGCGTAATTTCAGTTGTAGTACTGGTATACCAGGGGGTTCGTCGGAGCATTGGAATCTCATCGTTTACGGTGGTATCTCGTTTCTTCTTACCCTACTGCTATTTCTCCCTTTTTATTTTGCATTCGATTCTATGAATCCTTCTGATTTGGTTGATGAATGGGTTCACTTGAGCTTAACGGAGGAGGAAGAAATTACTTCGGTGACTGCGGATAGAGATGCGGTTGATAGAACCGGACAGCTGTTGGGATTTTGTCTTTTGGGCAAGCTGCTGTGTCATCGATCGTTGGGAGCTGAGGTTATGCGGAGGAATTTTAGGGTTGCATGGAAGGTTGATCAAGGGTTGTAGGTGGACAGGTTAGGCAAGAATCTGTTTATCTTCCATTTTGTGCTCGAGGCGGAACGAATTCGAGTTCTACGACAGGGGCCTTGGATTTTTGAAAATTTCCTTCTGGTCTTGGAGCTTCCAATTCGTGGTCTTAAGCCATCTGATTACCAATTTTCTTCTTCGGCTTTTTGGATCCATGTGTTTGATTTGCCTCTGGACTGGTTCAATCAAAGTATGGCAGAGCAAATTGGCAATGTCATGGTGTGTTTGAAGATGTGGACAATCGGAACGGATTCCTCTTCTAGGGAGCTAGTCTGAGAATAAGAGTTAGAATCGACCTGTCTCGACCTCTTCGGCGTAGGATTCGTATTTATCCGGATGGTCCCCTTATTGGGTTGTGGGTTCCCTTCAGGTATGAACGTCTTCCTGAGCTATGTTCGTTCTATGGTATTATTGGTCATGTATCGCGTGATTGTGCCCTGTCTCTTCGATCGGAATGGGGTTCTGGTTCAATCCCACAATATGGGGATTGGTTGCGTTTTTCAAGGAAGGGCATGATTCTGAATCACTTCACGGCAAGAGATGTTGGTCGTGCCTCTGTTCGAGAGCCGCCTCAAGGTCATCGCTTAACGATTGAGGTAGCTTTGATGCCGAATACCGTTGTTCCGGTAGATGAATTGCCAAGGCAGCCCCAATGTGGAATTCGAATTACGGAGCCGACTGAAGAGCAGTATCGGGGAGGATCAGCTAAGGGGTCACCAACATTGTATTCCTTGTCCGGAGGGTCGAACGTGTCCATCAAAGGCAAAGAAAAAGTTGTTGAGGTGGCGAGCAAGTACAGGGCAGGTCTCCCTCGATGGTTGCCGAAAAATTCTGATCGGAACAGTCTTCCAACTCCAGAAGTGACGGTGCAACGGGATCCTGTGCCAGTGACTGTTACAACAAAGGAGACAGAGAAATTAAAGCAAACGTTTAATGAAGGACCAAGTGATTTGCAAGGGCATTTAAGGCTCGTAACCTGCGTTTATCAGAAAATTTAA

mRNA sequence

ATGAGGAAAGGAGGCGTTTTCCGGCGCGATTTTAGGAGCCTTGGTCGGAATGGTCAATCTTCGGCGAAATCTTTTTGTAGTACTGGTATACCAGGGGGTTCGTCGGAGCATTGGAATCTCATCGTTTACGGTGGTATCTCGTTTCTTCTTACCCTACTGCTATTTCTCCCTTTTTATTTTGCATTCGATTCTATGAATCCTTCTGATTTGGTTGATGAATGGGTTCACTTGAGCTTAACGGAGGAGGAAGAAATTACTTCGGTGACTGCGGATAGAGATGCGGTTGATAGAACCGGACAGCTGTTGGGATTTTGTCTTTTGGGCAAGCTGCTGTGTCATCGATCGTTGGGAGCTGAGGTTATGCGGAGGAATTTTAGGGTTGCATGGAAGGGGCCTTGGATTTTTGAAAATTTCCTTCTGGTCTTGGAGCTTCCAATTCGTGGTCTTAAGCCATCTGATTACCAATTTTCTTCTTCGGCTTTTTGGATCCATGTGTTTGATTTGCCTCTGGACTGGTTCAATCAAAGTATGGCAGAGCAAATTGGCAATGTCATGGGAGCTAGTCTGAGAATAAGAGTTAGAATCGACCTGTCTCGACCTCTTCGGCGTAGGATTCGTATTTATCCGGATGGTCCCCTTATTGGGTTGTGGGTTCCCTTCAGGTATGAACGTCTTCCTGAGCTATGTTCGTTCTATGGTATTATTGGTCATGTATCGCGTGATTGTGCCCTGTCTCTTCGATCGGAATGGGGTTCTGGTTCAATCCCACAATATGGGGATTGGTTGCGTTTTTCAAGGAAGGGCATGATTCTGAATCACTTCACGGCAAGAGATGTTGGTCGTGCCTCTGTTCGAGAGCCGCCTCAAGGTCATCGCTTAACGATTGAGGTAGCTTTGATGCCGAATACCGTTGTTCCGGTAGATGAATTGCCAAGGCAGCCCCAATGTGGAATTCGAATTACGGAGCCGACTGAAGAGCAGTATCGGGGAGGATCAGCTAAGGGGTCACCAACATTGTATTCCTTGTCCGGAGGGTCGAACGTGTCCATCAAAGGCAAAGAAAAAGTTGTTGAGGTGGCGAGCAAGTACAGGGCAGGTCTCCCTCGATGGTTGCCGAAAAATTCTGATCGGAACAGTCTTCCAACTCCAGAAGTGACGGTGCAACGGGATCCTGTGCCAGTGACTGTTACAACAAAGGAGACAGAGAAATTAAAGCAAACGTTTAATGAAGGACCAAGTGATTTGCAAGGGCATTTAAGGCTCGTAACCTGCGTTTATCAGAAAATTTAA

Coding sequence (CDS)

ATGAGGAAAGGAGGCGTTTTCCGGCGCGATTTTAGGAGCCTTGGTCGGAATGGTCAATCTTCGGCGAAATCTTTTTGTAGTACTGGTATACCAGGGGGTTCGTCGGAGCATTGGAATCTCATCGTTTACGGTGGTATCTCGTTTCTTCTTACCCTACTGCTATTTCTCCCTTTTTATTTTGCATTCGATTCTATGAATCCTTCTGATTTGGTTGATGAATGGGTTCACTTGAGCTTAACGGAGGAGGAAGAAATTACTTCGGTGACTGCGGATAGAGATGCGGTTGATAGAACCGGACAGCTGTTGGGATTTTGTCTTTTGGGCAAGCTGCTGTGTCATCGATCGTTGGGAGCTGAGGTTATGCGGAGGAATTTTAGGGTTGCATGGAAGGGGCCTTGGATTTTTGAAAATTTCCTTCTGGTCTTGGAGCTTCCAATTCGTGGTCTTAAGCCATCTGATTACCAATTTTCTTCTTCGGCTTTTTGGATCCATGTGTTTGATTTGCCTCTGGACTGGTTCAATCAAAGTATGGCAGAGCAAATTGGCAATGTCATGGGAGCTAGTCTGAGAATAAGAGTTAGAATCGACCTGTCTCGACCTCTTCGGCGTAGGATTCGTATTTATCCGGATGGTCCCCTTATTGGGTTGTGGGTTCCCTTCAGGTATGAACGTCTTCCTGAGCTATGTTCGTTCTATGGTATTATTGGTCATGTATCGCGTGATTGTGCCCTGTCTCTTCGATCGGAATGGGGTTCTGGTTCAATCCCACAATATGGGGATTGGTTGCGTTTTTCAAGGAAGGGCATGATTCTGAATCACTTCACGGCAAGAGATGTTGGTCGTGCCTCTGTTCGAGAGCCGCCTCAAGGTCATCGCTTAACGATTGAGGTAGCTTTGATGCCGAATACCGTTGTTCCGGTAGATGAATTGCCAAGGCAGCCCCAATGTGGAATTCGAATTACGGAGCCGACTGAAGAGCAGTATCGGGGAGGATCAGCTAAGGGGTCACCAACATTGTATTCCTTGTCCGGAGGGTCGAACGTGTCCATCAAAGGCAAAGAAAAAGTTGTTGAGGTGGCGAGCAAGTACAGGGCAGGTCTCCCTCGATGGTTGCCGAAAAATTCTGATCGGAACAGTCTTCCAACTCCAGAAGTGACGGTGCAACGGGATCCTGTGCCAGTGACTGTTACAACAAAGGAGACAGAGAAATTAAAGCAAACGTTTAATGAAGGACCAAGTGATTTGCAAGGGCATTTAAGGCTCGTAACCTGCGTTTATCAGAAAATTTAA

Protein sequence

MRKGGVFRRDFRSLGRNGQSSAKSFCSTGIPGGSSEHWNLIVYGGISFLLTLLLFLPFYFAFDSMNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWKGPWIFENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVMGASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWVPFRYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDWLRFSRKGMILNHFTARDVGRASVREPPQGHRLTIEVALMPNTVVPVDELPRQPQCGIRITEPTEEQYRGGSAKGSPTLYSLSGGSNVSIKGKEKVVEVASKYRAGLPRWLPKNSDRNSLPTPEVTVQRDPVPVTVTTKETEKLKQTFNEGPSDLQGHLRLVTCVYQKI
Homology
BLAST of Lag0035487 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 179.9 bits (455), Expect = 4.7e-41
Identity = 95/247 (38.46%), Postives = 134/247 (54.25%), Query Frame = 0

Query: 65  MNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRN 124
           M+  +L+ +W    LT EE+  ++  D DAV    Q L + L+GKLL  R + A+V+ R 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 125 FRVAWK-------------------------------GPWIFENFLLVLELPIRGLKPSD 184
             +AWK                               GPW F+  L+VL+ P      S+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 185 YQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLS 244
            +F+  AFWIH+FDLP+ W N++MA ++GN +               GASLRIRV ID++
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 245 RPLRRRIRIYPDGPLIGLWVPFRYERLPELCSFYGIIGHVSRDC-ALSLRSEWGSGSIPQ 265
           +PLRR I+I  DGP+ G W+P +YERLP+ C F G+IGH S DC A  L ++  S +  +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

BLAST of Lag0035487 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 150.6 bits (379), Expect = 3.1e-32
Identity = 79/247 (31.98%), Postives = 122/247 (49.39%), Query Frame = 0

Query: 65  MNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRN 124
           M  S+L++EW +  LT EE+  +V  D  A++ TG+ L   L+ KLL  RS+   V++  
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 125 FRVAWK--------------------------------GPWIFENFLLVLELPIRGLKPS 184
            ++AWK                                GPW F+  L++++ P+   KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 185 DYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDL 244
           D  F + + W+H FDL L   N++MA ++GN +               G+ LR+RVR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 245 SRPLRRRIRIYPDGPLIGLWVPFRYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQ 265
            +PL R I++  DGP+ G W+P +YERLP+     G + H+ +DC+             Q
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNL--Q 240

BLAST of Lag0035487 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 141.4 bits (355), Expect = 1.9e-29
Identity = 79/243 (32.51%), Postives = 113/243 (46.50%), Query Frame = 0

Query: 69  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVA 128
           DL++EW +  LT EEE T++  D  A   TG  L   L+GKL   R +   VM+   R A
Sbjct: 5   DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64

Query: 129 WK--------------------------------GPWIFENFLLVLELPIRGLKPSDYQF 188
           WK                                GPW F+  L+++  P+  + PS+  F
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 189 SSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPL 248
           +    W+  FDLPL    + MA ++GN +               G++LR+RV +D+S+PL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184

Query: 249 RRRIRIYPDGPLIGLWVPFRYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDW 265
           RR I++  DGP+ G W+P +YERLP+ C            C LS      S    QYG W
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFC----------YHCGLS-----SSRKKHQYGSW 232

BLAST of Lag0035487 vs. NCBI nr
Match: XP_023916508.1 (uncharacterized protein LOC112028084 [Quercus suber])

HSP 1 Score: 121.7 bits (304), Expect = 1.5e-23
Identity = 77/245 (31.43%), Postives = 116/245 (47.35%), Query Frame = 0

Query: 69  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFC---LLGKLLCHRSLGAEVMRRNF 128
           DL++E  H+ LT+EEE+    +     +   +L+  C   L+G+LL +R      ++   
Sbjct: 4   DLIEELKHMKLTKEEEVQIAVSG----EGRRELIEECELSLVGRLLSNRKQNQRALKGTL 63

Query: 129 RVAWK-------------------------------GPWIFENFLLVLELPIRGLKPSDY 188
           R AWK                               GPW FEN LL+L+   +G+  ++ 
Sbjct: 64  RSAWKTGSDLRIVEVGNDTYQFKFSSEYQMRWVENNGPWNFENNLLLLKRWEKGMTANNI 123

Query: 189 QFSSSAFWIHVFDLPLDWFNQSMAEQIGNVMG---------------ASLRIRVRIDLSR 248
            F+ S FW+ ++ LP D  ++ +   IGN +G                 +RIRV I L+R
Sbjct: 124 SFTHSPFWLQIWGLPFDMMSEKIGRDIGNSIGNFMAADSKSWSSDQAKFMRIRVNIPLNR 183

Query: 249 PLRR-RIRIYPDGPLIGLWVPFRYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQY 264
           PLRR  + + P+G    ++  FRYERLP  C   G++GH  R C     SE  +  +PQY
Sbjct: 184 PLRRCGVVVSPEGEKFKVY--FRYERLPVFCFLCGVMGHDERHCT---SSERRTEELPQY 239

BLAST of Lag0035487 vs. NCBI nr
Match: XP_027060738.1 (uncharacterized protein LOC113687293 [Coffea arabica])

HSP 1 Score: 120.9 bits (302), Expect = 2.6e-23
Identity = 71/229 (31.00%), Postives = 104/229 (45.41%), Query Frame = 0

Query: 81  EEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK---------- 140
           +EEE+  +  D D +D    L   C+LGKL   +    E +    +  W           
Sbjct: 17  DEEEVHLLPGDADDID--DSLSELCILGKLFTRKQFNGEALMATTKKVWNPSKGLTHTSL 76

Query: 141 ---------------------GPWIFENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLP 200
                                GPW F++ LLV+   I  ++ ++ +  + +FW+ V++LP
Sbjct: 77  GDNLFLFKFNDMLDKKKVFSGGPWCFDDNLLVISDYIGNVQSTNMKLDTCSFWVRVYNLP 136

Query: 201 LDWFNQSMAEQIGNVMGA---------------SLRIRVRIDLSRPLRRRIRIYPDGPLI 260
           L W N   AE +GN +G                 LRIRV+I L  PL+R + ++ +G + 
Sbjct: 137 LSWMNAKTAEYLGNKLGVYEGFEQRGDLFAWGKFLRIRVKIHLESPLKRVMHLFIEGKVH 196

Query: 261 GLWVPFRYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDWLR 264
              V F+YERLP LC + G IGH  RDC L L +       PQYG WLR
Sbjct: 197 K--VLFQYERLPILCFYCGRIGHGDRDCELKLDAATYDTGDPQYGGWLR 241

BLAST of Lag0035487 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.3e-41
Identity = 95/247 (38.46%), Postives = 134/247 (54.25%), Query Frame = 0

Query: 65  MNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRN 124
           M+  +L+ +W    LT EE+  ++  D DAV    Q L + L+GKLL  R + A+V+ R 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 125 FRVAWK-------------------------------GPWIFENFLLVLELPIRGLKPSD 184
             +AWK                               GPW F+  L+VL+ P      S+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 185 YQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLS 244
            +F+  AFWIH+FDLP+ W N++MA ++GN +               GASLRIRV ID++
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 245 RPLRRRIRIYPDGPLIGLWVPFRYERLPELCSFYGIIGHVSRDC-ALSLRSEWGSGSIPQ 265
           +PLRR I+I  DGP+ G W+P +YERLP+ C F G+IGH S DC A  L ++  S +  +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

BLAST of Lag0035487 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-32
Identity = 79/247 (31.98%), Postives = 122/247 (49.39%), Query Frame = 0

Query: 65  MNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRN 124
           M  S+L++EW +  LT EE+  +V  D  A++ TG+ L   L+ KLL  RS+   V++  
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 125 FRVAWK--------------------------------GPWIFENFLLVLELPIRGLKPS 184
            ++AWK                                GPW F+  L++++ P+   KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 185 DYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDL 244
           D  F + + W+H FDL L   N++MA ++GN +               G+ LR+RVR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 245 SRPLRRRIRIYPDGPLIGLWVPFRYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQ 265
            +PL R I++  DGP+ G W+P +YERLP+     G + H+ +DC+             Q
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNL--Q 240

BLAST of Lag0035487 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 9.1e-30
Identity = 79/243 (32.51%), Postives = 113/243 (46.50%), Query Frame = 0

Query: 69  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVA 128
           DL++EW +  LT EEE T++  D  A   TG  L   L+GKL   R +   VM+   R A
Sbjct: 5   DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64

Query: 129 WK--------------------------------GPWIFENFLLVLELPIRGLKPSDYQF 188
           WK                                GPW F+  L+++  P+  + PS+  F
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 189 SSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPL 248
           +    W+  FDLPL    + MA ++GN +               G++LR+RV +D+S+PL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184

Query: 249 RRRIRIYPDGPLIGLWVPFRYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDW 265
           RR I++  DGP+ G W+P +YERLP+ C            C LS      S    QYG W
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFC----------YHCGLS-----SSRKKHQYGSW 232

BLAST of Lag0035487 vs. ExPASy TrEMBL
Match: A0A2N9H0Z5 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33191 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-25
Identity = 76/213 (35.68%), Postives = 107/213 (50.23%), Query Frame = 0

Query: 69  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLG--AEVMRRNFR 128
           +LV+EW   SLTE+E     T + DA+  +      CLLGKL+  +      +   R  R
Sbjct: 4   ELVEEWRKFSLTEDEG-AGFTVEEDAMGNSLVQGSHCLLGKLITDKPFNKFKDEFERT-R 63

Query: 129 VAWKGPWIFENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM- 188
           V    PW+F N+LL L         +  QFS   FW+ +  +PL++  +   +++GN M 
Sbjct: 64  VLNGSPWLFNNYLLALNEFNGSCPAAQIQFSKCCFWVQLHGIPLNYMTKQTGQRLGNAMG 123

Query: 189 --------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWVPFRYERLPELCSF 248
                         G  LRIR+ +D ++P+ R  R+        LWV F+YERLP LC F
Sbjct: 124 KVVKVDVPEGGVAWGPYLRIRLCLDFTKPIPRG-RLVTFQSSGQLWVSFKYERLPWLCFF 183

Query: 249 YGIIGHVSRDCALSLRSEWGSGSI-PQYGDWLR 264
            G++GH  RDC  SLRS     +I  QYG WLR
Sbjct: 184 CGLLGHSERDCVASLRSRCQGATISKQYGPWLR 213

BLAST of Lag0035487 vs. ExPASy TrEMBL
Match: A0A2N9GWE9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31787 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-24
Identity = 79/254 (31.10%), Postives = 115/254 (45.28%), Query Frame = 0

Query: 69  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVA 128
           +LV+EW   SLTE E    VT   DA++ +  +   CLLGKL   +    E ++      
Sbjct: 4   ELVEEWRKFSLTEAEG-PGVTIAADAMEVSRMVGSHCLLGKLWTEKYFNREALKATMLRL 63

Query: 129 WKG--------------------------------PWIFENFLLVLELPIRGLKPSDYQF 188
           W G                                PW+F+N LL+L+        S  QF
Sbjct: 64  WGGVARGITARNIGENLFVFQFRDDFERRRVMTGAPWLFDNSLLLLKEFDGSCPASQVQF 123

Query: 189 SSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPL 248
           S   FW+  + +PL +  +   EQ+G+V                G  LR+R+ +D+++P+
Sbjct: 124 SWCCFWVQFYGVPLSYMTKQTGEQVGSVFGKVEEVDVSEDGVGWGTYLRVRICLDITKPI 183

Query: 249 RRRIRIYPDGPLIGLWVPFRYERLPELCSFYGIIGHVSRDCALSLRSEWGS-GSIPQYGD 270
            R  R+     L  +WV F+YERLP LC   G+IGH+ RDC    ++   S G + QYG 
Sbjct: 184 PRG-RVVTFNSLGQMWVSFKYERLPWLCFHCGLIGHLERDCVSRGKNNSSSPGGVQQYGP 243

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156185.14.7e-4138.46uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.13.1e-3231.98uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022158377.11.9e-2932.51uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_023916508.11.5e-2331.43uncharacterized protein LOC112028084 [Quercus suber][more]
XP_027060738.12.6e-2331.00uncharacterized protein LOC113687293 [Coffea arabica][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU552.3e-4138.46uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ11.5e-3231.98uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1DX309.1e-3032.51uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A2N9H0Z52.3e-2535.68CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3319... [more]
A0A2N9GWE91.5e-2431.10Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31787 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 195..243
e-value: 4.3E-9
score: 35.9
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 76..255
NoneNo IPR availablePANTHERPTHR31286:SF26BNAC07G15150D PROTEINcoord: 76..255

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035487.1Lag0035487.1mRNA