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Lag0034053 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCCTTCCCAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCAGATGGTTCCAGTGATGCTGATGCTGATGCACCTTCTGATCATGATGATGATGATGAAGATGGAAGAACTAAATCTTGTTATGCAAATCATCAAGATGACAGTGATGATTCAATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAGGACACCCATTTGGAGGACATGGGAGGCTGAAAAATCCCAATGGCCTGCCTCTCTTCAAAACCAAAACCAAGAAGCCATTGATGGAGAAGCCAAGAGCTGAGAGGAAGGAAGTGAAAGACAAGTTGGTTTTGGTGGGCCAAAACCCAAAGAGTTCAGTTCAGAGCAGTTCAAAGGTAAGAAAGAGCATCTGGATGGGCAAAAGAAACTAGCCAAGCTGGTTTCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTGTTTTCTTTGGGTTTTTCATTTATGCTTACTTGTAGGCTGAAACTGAACTGAACTGA ATGGAGCCTTCCCAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCAGATGGTTCCAGTGATGCTGATGCTGATGCACCTTCTGATCATGATGATGATGATGAAGATGGAAGAACTAAATCTTGTTATGCAAATCATCAAGATGACAGTGATGATTCAATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAGGACACCCATTTGGAGGACATGGGAGGCTGAAAAATCCCAATGGCCTGCCTCTCTTCAAAACCAAAACCAAGAAGCCATTGATGGAGAAGCCAAGAGCTGAGAGGAAGGAAGTGAAAGACAAGTTGGTTTTGGTGGGCCAAAACCCAAAGAGTTCAGTTCAGAGCAGTTCAAAGGCTGAAACTGAACTGAACTGA ATGGAGCCTTCCCAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCAGATGGTTCCAGTGATGCTGATGCTGATGCACCTTCTGATCATGATGATGATGATGAAGATGGAAGAACTAAATCTTGTTATGCAAATCATCAAGATGACAGTGATGATTCAATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAGGACACCCATTTGGAGGACATGGGAGGCTGAAAAATCCCAATGGCCTGCCTCTCTTCAAAACCAAAACCAAGAAGCCATTGATGGAGAAGCCAAGAGCTGAGAGGAAGGAAGTGAAAGACAAGTTGGTTTTGGTGGGCCAAAACCCAAAGAGTTCAGTTCAGAGCAGTTCAAAGGCTGAAACTGAACTGAACTGA MEPSQIFGVSEECHSSESGWTMYIGSPADGSSDADADAPSDHDDDDEDGRTKSCYANHQDDSDDSMASDASSGPSHQQGHPFGGHGRLKNPNGLPLFKTKTKKPLMEKPRAERKEVKDKLVLVGQNPKSSVQSSSKAETELN Homology
BLAST of Lag0034053 vs. NCBI nr
Match: XP_022135291.1 (uncharacterized protein LOC111007289 isoform X1 [Momordica charantia]) HSP 1 Score: 193.4 bits (490), Expect = 1.4e-45 Identity = 108/150 (72.00%), Postives = 121/150 (80.67%), Query Frame = 0
BLAST of Lag0034053 vs. NCBI nr
Match: XP_022135292.1 (uncharacterized protein LOC111007289 isoform X2 [Momordica charantia]) HSP 1 Score: 176.0 bits (445), Expect = 2.3e-40 Identity = 100/141 (70.92%), Postives = 112/141 (79.43%), Query Frame = 0
BLAST of Lag0034053 vs. NCBI nr
Match: XP_022974149.1 (uncharacterized protein LOC111472737 [Cucurbita maxima]) HSP 1 Score: 161.0 bits (406), Expect = 7.6e-36 Identity = 96/141 (68.09%), Postives = 102/141 (72.34%), Query Frame = 0
BLAST of Lag0034053 vs. NCBI nr
Match: XP_022933470.1 (uncharacterized protein LOC111440875 [Cucurbita moschata] >KAG6587616.1 hypothetical protein SDJN03_16181, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 156.4 bits (394), Expect = 1.9e-34 Identity = 93/141 (65.96%), Postives = 102/141 (72.34%), Query Frame = 0
BLAST of Lag0034053 vs. NCBI nr
Match: XP_023531634.1 (uncharacterized protein LOC111793816 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 156.0 bits (393), Expect = 2.4e-34 Identity = 93/141 (65.96%), Postives = 102/141 (72.34%), Query Frame = 0
BLAST of Lag0034053 vs. ExPASy Swiss-Prot
Match: Q9CA45 (Protein SOB FIVE-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=SOFL2 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 2.1e-04 Identity = 43/109 (39.45%), Postives = 50/109 (45.87%), Query Frame = 0
BLAST of Lag0034053 vs. ExPASy Swiss-Prot
Match: Q9LEZ1 (Protein SUPPRESSOR OF PHYTOCHROME B 5 OS=Arabidopsis thaliana OX=3702 GN=SOB5 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 2.7e-04 Identity = 34/74 (45.95%), Postives = 40/74 (54.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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