Lag0032845 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAGACCTTTCACCAAAGAGGAGATTGAAGCTGCTATCAAAGGAATGAACCCTACAAAGGCTTCGAGTCCTGACGGAGCCCACGCCAAGCTGTATCAGAAAGGTTGGGACACCCTAGGGGAAGACACCATTAAGGTCTGCTTAGGAATTCTAAACAATAGAGACAACATGGAAAACATCAACAACACATTGATAGCTCTCATCCCTAAAACTAAGGACCCGAAAAGGATGGCGGAATTCAGACCTATTAGCCTATGCAACGTGATCTACAAGGCAGTGGCCAAAGCAATAGCTAATAGAATGAAGACGGCCCTAGATACTATCATCTCCCCAAGTCAATCAGCATTCATCTCCGGCAGACAAATAACGGATAATGTGATAGTGGCGTTTGAATGCATCCACGCCTTGAACAAAAAAAGAAGGGGCAAAAAAGGGAACCTTGCCATAAAGCTTGACATGAGCAAAACTTATGACAGGGTGGAATGA ATGGACAGACCTTTCACCAAAGAGGAGATTGAAGCTGCTATCAAAGGAATGAACCCTACAAAGGCTTCGAGTCCTGACGGAGCCCACGCCAAGCTGTATCAGAAAGGTTGGGACACCCTAGGGGAAGACACCATTAAGGTCTGCTTAGGAATTCTAAACAATAGAGACAACATGGAAAACATCAACAACACATTGATAGCTCTCATCCCTAAAACTAAGGACCCGAAAAGGATGGCGGAATTCAGACCTATTAGCCTATGCAACGTGATCTACAAGGCAGTGGCCAAAGCAATAGCTAATAGAATGAAGACGGCCCTAGATACTATCATCTCCCCAAGTCAATCAGCATTCATCTCCGGCAGACAAATAACGGATAATGTGATAGTGGCGTTTGAATGCATCCACGCCTTGAACAAAAAAAGAAGGGGCAAAAAAGGGAACCTTGCCATAAAGCTTGACATGAGCAAAACTTATGACAGGGTGGAATGA ATGGACAGACCTTTCACCAAAGAGGAGATTGAAGCTGCTATCAAAGGAATGAACCCTACAAAGGCTTCGAGTCCTGACGGAGCCCACGCCAAGCTGTATCAGAAAGGTTGGGACACCCTAGGGGAAGACACCATTAAGGTCTGCTTAGGAATTCTAAACAATAGAGACAACATGGAAAACATCAACAACACATTGATAGCTCTCATCCCTAAAACTAAGGACCCGAAAAGGATGGCGGAATTCAGACCTATTAGCCTATGCAACGTGATCTACAAGGCAGTGGCCAAAGCAATAGCTAATAGAATGAAGACGGCCCTAGATACTATCATCTCCCCAAGTCAATCAGCATTCATCTCCGGCAGACAAATAACGGATAATGTGATAGTGGCGTTTGAATGCATCCACGCCTTGAACAAAAAAAGAAGGGGCAAAAAAGGGAACCTTGCCATAAAGCTTGACATGAGCAAAACTTATGACAGGGTGGAATGA MDRPFTKEEIEAAIKGMNPTKASSPDGAHAKLYQKGWDTLGEDTIKVCLGILNNRDNMENINNTLIALIPKTKDPKRMAEFRPISLCNVIYKAVAKAIANRMKTALDTIISPSQSAFISGRQITDNVIVAFECIHALNKKRRGKKGNLAIKLDMSKTYDRVE Homology
BLAST of Lag0032845 vs. NCBI nr
Match: CCA66036.1 (hypothetical protein [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 188.7 bits (478), Expect = 3.9e-44 Identity = 93/162 (57.41%), Postives = 113/162 (69.75%), Query Frame = 0
BLAST of Lag0032845 vs. NCBI nr
Match: XP_042962379.1 (uncharacterized protein LOC122296642 [Carya illinoinensis]) HSP 1 Score: 186.0 bits (471), Expect = 2.5e-43 Identity = 84/162 (51.85%), Postives = 123/162 (75.93%), Query Frame = 0
BLAST of Lag0032845 vs. NCBI nr
Match: XP_030923330.1 (uncharacterized protein LOC115950239 [Quercus lobata]) HSP 1 Score: 185.3 bits (469), Expect = 4.3e-43 Identity = 87/162 (53.70%), Postives = 120/162 (74.07%), Query Frame = 0
BLAST of Lag0032845 vs. NCBI nr
Match: KAF5471784.1 (hypothetical protein F2P56_008554 [Juglans regia]) HSP 1 Score: 184.9 bits (468), Expect = 5.6e-43 Identity = 85/159 (53.46%), Postives = 120/159 (75.47%), Query Frame = 0
BLAST of Lag0032845 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber]) HSP 1 Score: 184.1 bits (466), Expect = 9.5e-43 Identity = 90/158 (56.96%), Postives = 117/158 (74.05%), Query Frame = 0
BLAST of Lag0032845 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.5e-17 Identity = 53/162 (32.72%), Postives = 85/162 (52.47%), Query Frame = 0
BLAST of Lag0032845 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 7.1e-17 Identity = 57/167 (34.13%), Postives = 88/167 (52.69%), Query Frame = 0
BLAST of Lag0032845 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 3.3e-14 Identity = 51/167 (30.54%), Postives = 84/167 (50.30%), Query Frame = 0
BLAST of Lag0032845 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.0e-12 Identity = 49/163 (30.06%), Postives = 80/163 (49.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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