Lag0032646 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032646
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	1-acyl-sn-glycerol-3-phosphate acyltransferase delta isoform 1
Location	chr11: 35594078 .. 35595689 (-)
RNA-Seq Expression	Lag0032646
Synteny	Lag0032646

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAACCCATCTCTGTTCTCTTCATCAAGCTCCAACCTCCCAATTCGTCCCAACTTTTCTGAGTTATTCTCCTTTTTCGCCCAATGTCGGAGCAATCCCACGCAGGATTTCAGTTGAGCCCCATCCTCTCAGAAACAGAAGCTTCCACAGTAAAAGAAATGGTGTTATCTGTGGGGCAATTTTGCCTGTCGATCCATGGGCGCCCAACGTCGATTCTCAGAGCATAGCCTCGCAGATTTTTGCCTTTTCCCTGTTTCCTTACATTGGTTTCTTGTACTTCATCACCAAATCAAAGACGGCTCCGAAGCTCACTCTCTTCGGTTTCTACTTCTTGCTTGCCTTTGTGGGTGCTACCAGTGAGTTCCCCTAATCCATCTCCTTGGTTCTGGGTTTGATTTTACAGTTCCATATGATTATCTTTTCCCTTTTGTTTCGGTTATCCATCGAAGTGGGTGACTCGACTACTTCAATTTTGGAGTAATTGGCATATGGGTCTATGAATTGCCACTGATTTTGAAGTTTTGAAGTGTTAGATTAGGATGTTTCTATCCATTTGTATCTGTTTGTAGAACGATTGCCATTTGTATCCGTTTAGTTTCAAAATATTAACCAATGTGTTGAAATTATTAGGATAATGTTAGAAATATTGTTATGGTACCAAGGGCATGTTAGTTCACAATGGATTGGTGCATAAATCAATTGGATAAGGCATTATAACCTCAACCTTGGTTAGAGATTCGAATACGTTGGGCTGAAAGTAAAAATAAAAAGGTTTAGGAATGGTGGTTATAAATAGAGTGGATTAGGGAGAGCTGGGCAGTTTCTGGAAATAGTTTGTGAGAGAGTCTAACAGCCTCTGAAAGTGCTTGATAGAGGAAAATTATTAGGTGTTTCCGGTGCAATGAGGCCCACTCTTTAGAACCGTCGGATGTAAATCTTCAAATTTGTTTGTCCCTAATAACCGTTGTCCGTTGGATACAAAATCGAGGTACTTTTACCATTTTTCTTTCTTACATTCAACGGTGCAAAACTACCGGTCTCATTGCACCGGGAGCACCTAAAAATTTCTCCTTGATAGATTGTAGGCTTTCCTTATTCATATCAGTACCAATTTCAGTTAGTTTTCATTTTTATTTTTGGTTCCTATCACAAGGACTTGGGTTGTTTTTGTTTATAACAATTCTTAAATGTTGTGGAATGAAATCTTTATCCTAATGCCTATTATTTATTGCTGTTAACTACTTGATTTTTCAACTCTTGATTTTGCTTATGCTGGTTTGGTTTTTGCTGCTCCCACAACTCTGCAGTCCCTGCTGGAATATATGGTAATTCTTCCAATCAAACAACATTTTCTTTTCACTTTGCTTTTTGTCCATAATTGTCCATATTGCCTGAATTCCAAATGTTTTACTCTCTCTCTTGGAACAGCAAAGGTCCAATATGGAACTTCCTTGTCTAATGTTGACTGGTTACATGGAGGAGCTGAATCACTTCTCACTTTAACAAATTTATTCATTGTGTTGGGTTTGAGAGGAGCTCTTAGGAAATCTGAGGAGGCTGAAAACTCCACAACCTCACCTGTTCTAGAGTTGGAAAAAGAGAAGTCTTGA

mRNA sequence

ATGATAACCCATCTCTGTTCTCTTCATCAAGCTCCAACCTCCCAATTCGTCCCAACTTTTCTGAGTTATTCTCCTTTTTCGCCCAATGTCGGAGCAATCCCACGCAGGATTTCAGTTGAGCCCCATCCTCTCAGAAACAGAAGCTTCCACAGTAAAAGAAATGGTGTTATCTGTGGGGCAATTTTGCCTGTCGATCCATGGGCGCCCAACGTCGATTCTCAGAGCATAGCCTCGCAGATTTTTGCCTTTTCCCTGTTTCCTTACATTGGTTTCTTGTACTTCATCACCAAATCAAAGACGGCTCCGAAGCTCACTCTCTTCGGTTTCTACTTCTTGCTTGCCTTTGTGGGTGCTACCATCCCTGCTGGAATATATGCAAAGGTCCAATATGGAACTTCCTTGTCTAATGTTGACTGGTTACATGGAGGAGCTGAATCACTTCTCACTTTAACAAATTTATTCATTGTGTTGGGTTTGAGAGGAGCTCTTAGGAAATCTGAGGAGGCTGAAAACTCCACAACCTCACCTGTTCTAGAGTTGGAAAAAGAGAAGTCTTGA

Coding sequence (CDS)

ATGATAACCCATCTCTGTTCTCTTCATCAAGCTCCAACCTCCCAATTCGTCCCAACTTTTCTGAGTTATTCTCCTTTTTCGCCCAATGTCGGAGCAATCCCACGCAGGATTTCAGTTGAGCCCCATCCTCTCAGAAACAGAAGCTTCCACAGTAAAAGAAATGGTGTTATCTGTGGGGCAATTTTGCCTGTCGATCCATGGGCGCCCAACGTCGATTCTCAGAGCATAGCCTCGCAGATTTTTGCCTTTTCCCTGTTTCCTTACATTGGTTTCTTGTACTTCATCACCAAATCAAAGACGGCTCCGAAGCTCACTCTCTTCGGTTTCTACTTCTTGCTTGCCTTTGTGGGTGCTACCATCCCTGCTGGAATATATGCAAAGGTCCAATATGGAACTTCCTTGTCTAATGTTGACTGGTTACATGGAGGAGCTGAATCACTTCTCACTTTAACAAATTTATTCATTGTGTTGGGTTTGAGAGGAGCTCTTAGGAAATCTGAGGAGGCTGAAAACTCCACAACCTCACCTGTTCTAGAGTTGGAAAAAGAGAAGTCTTGA

Protein sequence

MITHLCSLHQAPTSQFVPTFLSYSPFSPNVGAIPRRISVEPHPLRNRSFHSKRNGVICGAILPVDPWAPNVDSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATIPAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKSEEAENSTTSPVLELEKEKS

Homology

[Close]

BLAST of Lag0032646 vs. NCBI nr
Match: TYK06093.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase delta isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 327.4 bits (838), Expect = 7.9e-86
Identity = 168/186 (90.32%), Postives = 173/186 (93.01%), Query Frame = 0


Query: 1   MITHLCSLHQAPTSQFVPTFLSYSPFS-PNVGAIPRRISVEPHPLRNRSFHSKRNGVICG 60
           MITHLCSL QAPT  FV TFLS SP S PNVGA P RISVEPHPLRNRSF SKRNG+ICG
Sbjct: 1   MITHLCSLRQAPTFPFVSTFLSSSPSSFPNVGANPYRISVEPHPLRNRSFKSKRNGIICG 60

Query: 61  AILPVDPWAPNVDSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 120
           AILPVDPWAPN+DSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT
Sbjct: 61  AILPVDPWAPNIDSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 120

Query: 121 IPAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKSEEAENSTTSPVLE 180
           IPAGIYAKV YGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRK  EAEN+T+SPVLE
Sbjct: 121 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYGEAENTTSSPVLE 180

Query: 181 LEKEKS 186
           LEKEK+
Sbjct: 181 LEKEKA 186

[Close]

BLAST of Lag0032646 vs. NCBI nr
Match: XP_038876261.1 (uncharacterized protein LOC120068528 isoform X2 [Benincasa hispida])

HSP 1 Score: 322.8 bits (826), Expect = 2.0e-84
Identity = 163/185 (88.11%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MITHLCSLHQAPTSQFVPTFLSYSPFSPNVGAIPRRISVEPHPLRNRSFHSKRNGVICGA 60
           MI HLCSL Q PTS FV TFLS S  S NVGA P R+S++PHPLRNRSF+SKRNG+ICGA
Sbjct: 1   MIIHLCSLRQPPTSSFVSTFLSSSSSSFNVGANPHRVSMKPHPLRNRSFNSKRNGIICGA 60

Query: 61  ILPVDPWAPNVDSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI 120
           ILPVDPWAPN+DSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI
Sbjct: 61  ILPVDPWAPNIDSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI 120

Query: 121 PAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKSEEAENSTTSPVLEL 180
           PAGIYAKV YGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRK  EAENST+SPVLEL
Sbjct: 121 PAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYGEAENSTSSPVLEL 180

Query: 181 EKEKS 186
           EKEK+
Sbjct: 181 EKEKA 185

[Close]

BLAST of Lag0032646 vs. NCBI nr
Match: XP_023522500.1 (uncharacterized protein LOC111786481 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 322.0 bits (824), Expect = 3.3e-84
Identity = 163/185 (88.11%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MITHLCSLHQAPTSQFVPTFLSYSPFSPNVGAIPRRISVEPHPLRNRSFHSKRNGVICGA 60
           MITHLCSL QAPTS FV TF S SP  PNVGAIP RIS+E HPL NRSF+SKRNG+IC A
Sbjct: 1   MITHLCSLRQAPTSLFVSTFPSSSPSPPNVGAIPHRISLERHPLGNRSFNSKRNGIICAA 60

Query: 61  ILPVDPWAPNVDSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI 120
           ILPVDPWAPN+DSQS+ASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI
Sbjct: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI 120

Query: 121 PAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKSEEAENSTTSPVLEL 180
           PAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRK E+ E ST+SPVLEL
Sbjct: 121 PAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL 180

Query: 181 EKEKS 186
           EKEK+
Sbjct: 181 EKEKA 185

[Close]

BLAST of Lag0032646 vs. NCBI nr
Match: XP_023549839.1 (uncharacterized protein LOC111808225 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 5.7e-84
Identity = 163/185 (88.11%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MITHLCSLHQAPTSQFVPTFLSYSPFSPNVGAIPRRISVEPHPLRNRSFHSKRNGVICGA 60
           MITHLCSL QAPTS FV TF S SP  PNVGAIP RIS+E HPL NRSF+SKRNG+IC A
Sbjct: 1   MITHLCSLPQAPTSLFVSTFPSSSPSPPNVGAIPHRISLERHPLGNRSFNSKRNGIICAA 60

Query: 61  ILPVDPWAPNVDSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI 120
           ILPVDPWAPN+DSQS+ASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI
Sbjct: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI 120

Query: 121 PAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKSEEAENSTTSPVLEL 180
           PAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRK E+ E ST+SPVLEL
Sbjct: 121 PAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL 180

Query: 181 EKEKS 186
           EKEK+
Sbjct: 181 EKEKA 185

[Close]

BLAST of Lag0032646 vs. NCBI nr
Match: XP_004143873.1 (uncharacterized protein LOC101210365 isoform X1 [Cucumis sativus] >KGN50028.1 hypothetical protein Csa_000626 [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 2.2e-83
Identity = 164/186 (88.17%), Postives = 171/186 (91.94%), Query Frame = 0


Query: 1   MITHLCSLHQAPTSQFVPTFLSYSPFS-PNVGAIPRRISVEPHPLRNRSFHSKRNGVICG 60
           MITHLCSL   PTS F+ TFLS SP S P+VGA P RISVEPHPLRNRSF SKRNG+ICG
Sbjct: 1   MITHLCSLRHPPTSPFISTFLSSSPSSFPSVGANPYRISVEPHPLRNRSFISKRNGIICG 60

Query: 61  AILPVDPWAPNVDSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 120
           AILPVDPWAPN+DSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT
Sbjct: 61  AILPVDPWAPNIDSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 120

Query: 121 IPAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKSEEAENSTTSPVLE 180
           IPAGIYAKV YGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRK  EAENST+S VLE
Sbjct: 121 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYGEAENSTSSSVLE 180

Query: 181 LEKEKS 186
           LEKE++
Sbjct: 181 LEKEEA 186

The following BLAST results are available for this feature:

BLAST of Lag0032646 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06093.1	7.9e-86	90.32	1-acyl-sn-glycerol-3-phosphate acyltransferase delta isoform 1 [Cucumis melo var...	[more]
XP_038876261.1	2.0e-84	88.11	uncharacterized protein LOC120068528 isoform X2 [Benincasa hispida]	[more]
XP_023522500.1	3.3e-84	88.11	uncharacterized protein LOC111786481 [Cucurbita pepo subsp. pepo]	[more]
XP_023549839.1	5.7e-84	88.11	uncharacterized protein LOC111808225 [Cucurbita pepo subsp. pepo]	[more]
XP_004143873.1	2.2e-83	88.17	uncharacterized protein LOC101210365 isoform X1 [Cucumis sativus] >KGN50028.1 hy...	[more]

BLAST of Lag0032646 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021995	Protein of unknown function DUF3593	PFAM	PF12159	DUF3593	coord: 78..163 e-value: 1.3E-37 score: 127.7
IPR021995	Protein of unknown function DUF3593	PANTHER	PTHR35473	FAMILY NOT NAMED	coord: 45..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0032646.1	Lag0032646.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016746	acyltransferase activity