Lag0032085 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACAAAAAGGAGTCGATCCAACCGTGGAATCATACCAATATTGTGTTTATTCCAAAATCTCGACAGCCAAGGTTAGTTTCTGATTATAGACCAATTAGGCTCTGTAATATTGCATATAAAACTGTTACAAAGGTTATTGCAAATAGATTGAAGATCATTTTGAACGATATCAAATATGAGTGCCAGTTGGCTTTTATTCCCGGTCGGTCTATAACTGATAATATGATTATTGGGCATGAAACTCTTCATTACCTTCAGAATAAAAGGAAAGGGAAGCAGGGCTATGCTGCTCTCAAATTAGATATGAGTAAGGCATATGATAGAGTAGAATGGCCTTATCTGAGTAAGGTTTTGGAACGATTGGGCTTTCATGAGGACTTGATTCACCTCATTATGGATTGTATTTCCTCTGCTTCCTTTTCTATCCTGGTTAATGGGAAGGCAGTGGGAAATATTAAATCATCTCGGGGTATACGACAAGGAGATCCCTTGTCTTCTTATCTGTTCCTGCTATGTACGAAAGGCCTCTCAGTCATGTTACAAACAACCTATTCTTGTTCGATCTCAGGTATTACAATTGTGAGACCTGTCCAAGAATTATTCATATGTTTTTTGCTGACGACAGTTTGATTTTCTTTAAGGCTACGATGGAAGAGTTTGGGATTTTCAAGTCAATTATGTTTGATTATGAAAAAATTCATATTGCATTTTTCTAAGAATGTTGGTTCTGACTCCCGGGTTTATTTGAGTAATTTGTTGGGTATGCGTTTGATCGATTCCTTTGGCCCTTATCTTGGTTTGCCTGCAAACTTCCATAGAGGTAAAACCAAAGATTTTCAGTTCTTATTAGACAAAGTGTGGTCAGTCTTCCAAGGTTGGAAATGTGGTTTGTTCTCGAAAGGTGGGAAGGAGGTGTTGATTAAGAGTATTATCCAATCGATTCCTACATATGCAATGGGTTGCTTCCAGATACCCAAAATGATCCTCTCAAAAATATTGGCTTTATGTGCAGCGAAGTTTAGGTGGGGAGAACAAGGGGACAAGCGAAAGATGCACTAGAGGAAATGGAATGATCTGTGTAAACGAAGGAATCTGGTGGACTAAATTTTCAGGATTTGGACAATTTTAACCAAGCTCTGTTAGCAGAACAAGTTTGGCGAGTGTTGGAGAATCCAAACTTAACTTTGTTGAAACTGCTTAAGGCGAGGTATTTCCCTTCATCTACATTGTTTAACACTTCGGCCAAGTCTCACTCCTCGTATTTTTGGAAGGGTTTCCTTTGGGGCATGGACTTACTTCAAAAGGGCACTCGTAGAAATCTTGGGAATGGTAATTCTATTCGAATATTTAAAGATCCGTGGCTACCTCGTCCGACGACTTTTAAGGCTTTGATGGTAACAGGGTTTCCTGATGTTAATGCCCTGTGTCTGATTTTGTCACCCCATCTAATCAATGGGATGTAGCAAAACTTCAACAACATTTGTGTGATAAGGACGTTCAATTGATTTGTAGTCTCCCTATTAGTCAAACGACTCCAGATTTATGGACATGGCATAATGATAGGACTGGATCGTACTCTGTTCGAAGTGGATATAAGCTTAGCATGATGAATCAACAGGAAACTTCTTCGGCTCAACCAGAAGAAGTAAGGTTATGGTGGAAGCAATTATGGAAATTGAGAATTCCTAAGAAAATTAGAGTCTGTTTGGTAGGCAATCTGAATTATGTTTTATGTTTTCAAATTCACTGAATTCAGTGAATATGCGTTTGGCAGATGTGTTTTTGAAAACTGTTTTCGGATTCTGTGATCCAAATAGTGGAAATTCTAAAAAAACAACTTTTTTATGTTTTCAGTGTATCCAGATTTTGATTTTGAAAATTTTAAATGCATAATTAAATTAAAATAAAAAATAAAAACTTTAATACATATAGTATTTCACGTTATAAACTCAATTTATTTTTGTGAAATTAAAATTTGTATAATATAATGTACTATAAATTATATGATATTGTAAAATAATAATTATAAAAAATTTATAGCACATAACATGTTTTTAAATTACTTAATAATAGTTTATATTCAACTTAGTATTTAGTGGATAACTACAAATAGTTTATGGTTTATAAATATATTATCAAACACATTCTGAACAATTGTTTAAATTGGAATCCAATTTTTTAATCTCCTAGCAAACATATATCTGAAAACATGAAATACAACTCTGTTTTCATTGAATCCCTTGTTTTCAAATTTCTGTTTTCAGATCACCAACCAAACGGGCCCTAAACATTTTGTTTGGAATTCGTTTCATAACTCTATTCCAACGATGATGAATCTTTGGCGCCACCATATTCCCGTGGAGGGGATTTGTCCTATTTTCAAATTCAATCCAGAAACGACAGAGCACGCCTTGTTCTTTTGCAAGCGTGCTAAGAAGGTTTGGAACGCTCTTCTTCCCTCGAATACGGAGTTTCCATCGGAAAATATAGATATAAAAGATAGGTGGATCCTTCTGAGTAGAAGTCGAGATATCAATATGGAACTTATTTGCATTGGAGCTTGGGCAGTCTAGAACGATAGAAATCACATGATTCACAACCGTCCTATTCCAAATATTGAGGTTCAATGTGTGTGGATTCTTGATTACTTGGCAGATTACCATAAGGCTAACCAGGTGGTATCCAAATCTATTTTGTCATTGGAAGATTTTTATGAAATGATTGTTAAAGGGGAGGACATAATCATGCACACGGATGCGGCGTTTGACCCAGTAAATCGGAAATCTGGTCTAGGAATTGTTTTTAGAGACAAACATGGTGTTCTGCAGGCAGGGCTAGCTTGGTGTTGCAATTCTGAAGTGGTTAAAAATATAAATAGAATTCACTTCAAAATACTATGCAAGTATACACAGGGTCTTGAAATTGTCTACCTCTATTGATTTAATTTGTCTTTTTAGTGATTTCAAATGGTTGGTTAAATTGATTGGGTTTTTGAAATGTTGAAACAAAAGAAATACAAAAGAGTAAATGATTACGACTAGAGAAAACATAATGGAAACAGACATAGGTTAAGACTTTTGTAATTGTTTATAAAGATGTTTCAGCAATTCTTTTGATTCGTCAATCTCATGCAGTCTTATCATCGTGATCCTCCCGGAACTCCAGATTTTTTGGAATATGTTTCAACTCCAATGAAGCTCTACTGA ATGAACAAAAAGGAGTCGATCCAACCGTGGAATCATACCAATATTGTGTTTATTCCAAAATCTCGACAGCCAAGGTTAGTTTCTGATTATAGACCAATTAGGCTCTGTAATATTGCATATAAAACTGTTACAAAGGTTATTGCAAATAGATTGAAGATCATTTTGAACGATATCAAATATGAGTGCCAGTTGGCTTTTATTCCCGGTCGGTCTATAACTGATAATATGATTATTGGGCATGAAACTCTTCATTACCTTCAGAATAAAAGGAAAGGGAAGCAGGGCTATGCTGCTCTCAAATTAGATATGAGTAAGGCATATGATAGAGTAGAATGGCCTTATCTGAGTAAGGTTTTGGAACGATTGGGCTTTCATGAGGACTTGATTCACCTCATTATGGATTGTATTTCCTCTGCTTCCTTTTCTATCCTGGTTAATGGGAAGGCAGTGGGAAATATTAAATCATCTCGGGGTATACGACAAGGAGATCCCTTGTCTTCTTATCTGTTCCTGCTATGTACGAAAGGCCTCTCAGTCATGTTACAAACAACCTATTCTTGTTCGATCTCAGAACAAGTTTGGCGAGTGTTGGAGAATCCAAACTTAACTTTGTTGAAACTGCTTAAGGCGAGGTATTTCCCTTCATCTACATTGTTTAACACTTCGGCCAAGTCTCACTCCTCGTATTTTTGGAAGGGTTTCCTTTGGGGCATGGACTTACTTCAAAAGGGCACTCGTAGAAATCTTGGGAATGCAAAACTTCAACAACATTTGTGTGATAAGGACGTTCAATTGATTTGTAGTCTCCCTATTAGTCAAACGACTCCAGATTTATGGACATGGCATAATGATAGGACTGGATCGTACTCTGTTCGAAGTGGATATAAGCTTAGCATGATGAATCAACAGGAAACTTCTTCGGCTCAACCAGAAGAAATCACCAACCAAACGGGCCCTAAACATTTTGTTTGGAATTCGTTTCATAACTCTATTCCAACGATGATGAATCTTTGGCGCCACCATATTCCCGTGGAGGGGATTTGTCCTATTTTCAAATTCAATCCAGAAACGACAGAGCACGCCTTGTTCTTTTGCAAGCGTGCTAAGAAGAACGATAGAAATCACATGATTCACAACCGTCCTATTCCAAATATTGAGGTTCAATGTGTGTGGATTCTTGATTACTTGGCAGATTACCATAAGGCTAACCAGGTGGTATCCAAATCTATTTTGTCATTGGAAGATTTTTATGAAATGATTGTTAAAGGGGAGGACATAATCATGCACACGGATGCGGCGTTTGACCCAGTAAATCGGAAATCTGGTCTAGGAATTGTTTTTAGAGACAAACATGGTGTTCTGCAGGCAGGGCTAGCTTGGTGTTGCAATTCTGAAGTGTCTTATCATCGTGATCCTCCCGGAACTCCAGATTTTTTGGAATATGTTTCAACTCCAATGAAGCTCTACTGA ATGAACAAAAAGGAGTCGATCCAACCGTGGAATCATACCAATATTGTGTTTATTCCAAAATCTCGACAGCCAAGGTTAGTTTCTGATTATAGACCAATTAGGCTCTGTAATATTGCATATAAAACTGTTACAAAGGTTATTGCAAATAGATTGAAGATCATTTTGAACGATATCAAATATGAGTGCCAGTTGGCTTTTATTCCCGGTCGGTCTATAACTGATAATATGATTATTGGGCATGAAACTCTTCATTACCTTCAGAATAAAAGGAAAGGGAAGCAGGGCTATGCTGCTCTCAAATTAGATATGAGTAAGGCATATGATAGAGTAGAATGGCCTTATCTGAGTAAGGTTTTGGAACGATTGGGCTTTCATGAGGACTTGATTCACCTCATTATGGATTGTATTTCCTCTGCTTCCTTTTCTATCCTGGTTAATGGGAAGGCAGTGGGAAATATTAAATCATCTCGGGGTATACGACAAGGAGATCCCTTGTCTTCTTATCTGTTCCTGCTATGTACGAAAGGCCTCTCAGTCATGTTACAAACAACCTATTCTTGTTCGATCTCAGAACAAGTTTGGCGAGTGTTGGAGAATCCAAACTTAACTTTGTTGAAACTGCTTAAGGCGAGGTATTTCCCTTCATCTACATTGTTTAACACTTCGGCCAAGTCTCACTCCTCGTATTTTTGGAAGGGTTTCCTTTGGGGCATGGACTTACTTCAAAAGGGCACTCGTAGAAATCTTGGGAATGCAAAACTTCAACAACATTTGTGTGATAAGGACGTTCAATTGATTTGTAGTCTCCCTATTAGTCAAACGACTCCAGATTTATGGACATGGCATAATGATAGGACTGGATCGTACTCTGTTCGAAGTGGATATAAGCTTAGCATGATGAATCAACAGGAAACTTCTTCGGCTCAACCAGAAGAAATCACCAACCAAACGGGCCCTAAACATTTTGTTTGGAATTCGTTTCATAACTCTATTCCAACGATGATGAATCTTTGGCGCCACCATATTCCCGTGGAGGGGATTTGTCCTATTTTCAAATTCAATCCAGAAACGACAGAGCACGCCTTGTTCTTTTGCAAGCGTGCTAAGAAGAACGATAGAAATCACATGATTCACAACCGTCCTATTCCAAATATTGAGGTTCAATGTGTGTGGATTCTTGATTACTTGGCAGATTACCATAAGGCTAACCAGGTGGTATCCAAATCTATTTTGTCATTGGAAGATTTTTATGAAATGATTGTTAAAGGGGAGGACATAATCATGCACACGGATGCGGCGTTTGACCCAGTAAATCGGAAATCTGGTCTAGGAATTGTTTTTAGAGACAAACATGGTGTTCTGCAGGCAGGGCTAGCTTGGTGTTGCAATTCTGAAGTGTCTTATCATCGTGATCCTCCCGGAACTCCAGATTTTTTGGAATATGTTTCAACTCCAATGAAGCTCTACTGA MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALKLDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQTTYSCSISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQKGTRRNLGNAKLQQHLCDKDVQLICSLPISQTTPDLWTWHNDRTGSYSVRSGYKLSMMNQQETSSAQPEEITNQTGPKHFVWNSFHNSIPTMMNLWRHHIPVEGICPIFKFNPETTEHALFFCKRAKKNDRNHMIHNRPIPNIEVQCVWILDYLADYHKANQVVSKSILSLEDFYEMIVKGEDIIMHTDAAFDPVNRKSGLGIVFRDKHGVLQAGLAWCCNSEVSYHRDPPGTPDFLEYVSTPMKLY Homology
BLAST of Lag0032085 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 282.0 bits (720), Expect = 1.0e-71 Identity = 191/638 (29.94%), Postives = 260/638 (40.75%), Query Frame = 0
BLAST of Lag0032085 vs. NCBI nr
Match: XP_024035599.1 (uncharacterized protein LOC112096407 [Citrus clementina]) HSP 1 Score: 279.6 bits (714), Expect = 5.0e-71 Identity = 171/447 (38.26%), Postives = 234/447 (52.35%), Query Frame = 0
BLAST of Lag0032085 vs. NCBI nr
Match: XP_030932623.1 (uncharacterized protein LOC115958352 [Quercus lobata]) HSP 1 Score: 255.0 bits (650), Expect = 1.3e-63 Identity = 161/491 (32.79%), Postives = 225/491 (45.82%), Query Frame = 0
BLAST of Lag0032085 vs. NCBI nr
Match: XP_030925054.1 (uncharacterized protein LOC115952115 [Quercus lobata]) HSP 1 Score: 248.4 bits (633), Expect = 1.2e-61 Identity = 159/491 (32.38%), Postives = 223/491 (45.42%), Query Frame = 0
BLAST of Lag0032085 vs. NCBI nr
Match: AAM93462.1 (putative reverse transcriptase [Oryza sativa Japonica Group]) HSP 1 Score: 240.0 bits (611), Expect = 4.4e-59 Identity = 139/404 (34.41%), Postives = 197/404 (48.76%), Query Frame = 0
BLAST of Lag0032085 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 7.9e-19 Identity = 58/157 (36.94%), Postives = 87/157 (55.41%), Query Frame = 0
BLAST of Lag0032085 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 8.7e-18 Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 0
BLAST of Lag0032085 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.2e-14 Identity = 59/224 (26.34%), Postives = 110/224 (49.11%), Query Frame = 0
BLAST of Lag0032085 vs. ExPASy Swiss-Prot
Match: Q03274 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 3.2e-12 Identity = 49/177 (27.68%), Postives = 89/177 (50.28%), Query Frame = 0
BLAST of Lag0032085 vs. ExPASy Swiss-Prot
Match: Q05118 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 6.3e-08 Identity = 29/87 (33.33%), Postives = 47/87 (54.02%), Query Frame = 0
BLAST of Lag0032085 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 4.9e-72 Identity = 191/638 (29.94%), Postives = 260/638 (40.75%), Query Frame = 0
BLAST of Lag0032085 vs. ExPASy TrEMBL
Match: A0A2N9GY38 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35098 PE=3 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 4.0e-66 Identity = 180/577 (31.20%), Postives = 257/577 (44.54%), Query Frame = 0
BLAST of Lag0032085 vs. ExPASy TrEMBL
Match: A0A2N9F6W6 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10717 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 8.4e-64 Identity = 153/440 (34.77%), Postives = 220/440 (50.00%), Query Frame = 0
BLAST of Lag0032085 vs. ExPASy TrEMBL
Match: A0A803PA46 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 1.6e-62 Identity = 184/643 (28.62%), Postives = 275/643 (42.77%), Query Frame = 0
BLAST of Lag0032085 vs. ExPASy TrEMBL
Match: A0A2N9FR17 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17540 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.1e-62 Identity = 150/425 (35.29%), Postives = 216/425 (50.82%), Query Frame = 0
BLAST of Lag0032085 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases ) HSP 1 Score: 70.5 bits (171), Expect = 4.3e-12 Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = 0
BLAST of Lag0032085 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 53.1 bits (126), Expect = 7.1e-07 Identity = 21/63 (33.33%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of Lag0032085 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) ) HSP 1 Score: 48.1 bits (113), Expect = 2.3e-05 Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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