Lag0032045 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0032045
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionGag/pol protein
Locationchr11: 23218942 .. 23224710 (+)
RNA-Seq ExpressionLag0032045
SyntenyLag0032045
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTCACAATGTTGCTGCTCCACGTGTCGATCGGTTCAAGGTCCGAGTGTCACAATGTTGCTGCACGTGTCGATCGGTTCGGCCGAAGGTGAAGTCCGCGTTTGACCGTCCTTCCGCGCGCGACGTTGACCGTTTGAAGTGTCGTCAGTTCCGTTTGTTGACCGTTAGTCTCGCCTGCGCGGATTGCTCCTGTTGTGACACGTGGCAGCTGCTTACCTCCTTTTGTGGGAAAGTGGTTTTCGATTGGGCTATATAAGACCCTTCTGAGCATCGTAGAAAATCATTCATTCTTCGTTTGATTTTCTTACTTCCTACATTCCAATCCTTCTCTCTCGAGTGCACGTACGAGAAGGGTGTAAACGATTTAGCACCGTGGTCGTGCCGAAATTGCTTTCAAGGTCGTGGTTATCTCCACGACACAACAACTGTGTTTCTCAACTTCTTCTAACAGTGAGTGCTTGAGCGCCGACAAAAGCTTTGTGACGGCGTTCAATCTGTCTCGCTCTCTCTTGTCTAGTTCGAATCGTGGGTCACGTACGGGAAATGACTGCGGCGGCGTTGCTGAGAGAGAGAGGACGACAGTGAGTGGGTATTGCGTTGCTGAAAGAGAGGACGACAAAATCTACAAAAAAACAAACCCAAATCTAGAAAAAAAAATTGTCTGAATACCATATCTGAAACGAGCCTTATCTTTCCGACGCCAACGGTGAGTGGGTATCGTCGTGTCTTTCCAGATATTGTTTTTAGGCTTCGATTAGTGGGTATCATTGATTTTTTTTGTGGGCATTCCAGATCTGGTCATGGGTATCGCCGACGGGGAGGGAAGAGGAATTCCCTTCTCCTCATTTCGGCATGGGGAACGGGGATGAGTGAGTTCTCCCTCCTCTTTTCTGTTAAAGAAAAAAGAAGATGGAGATAAAGGGGAAGAAAGAGAAAAGAGAAAGGAAGACGGAAGAAAAAAAATTGTCAAGCAGTTGTTGCTGTCGCCGACAGATGTTGAAGAAGTAGCAGCTGAAGTTTGGTGAAGAAAAAGAGGAGTTGTGGCCAGTGGTTGGGTCATGGAAGAAGGAATGTTTGAAGAAAAATGTGGAGAAGATGAAGAAAAAGAAGAACGAGAAAATAAATAATAATAAAATAATATTTTAATTAACTTATTATTTATTTTATTTTAAAAAATTGTAAAATATTTTTTAATAAAAAAATAGTGTCACGTCAACCAACCGTTTGTTTTTAACGGAAAATTGGATGGAGGGACTAAAATGAAACGAAATGCAAACCTTAGGGACTAAATTGTCGAGTTTGAAAACTTAGGGACCAAAATGAAACCTAACCCAAACCTCATGGACTAAATGTGTATTTTTCCCTTAAATAAAAAAGACAAATAATAATTAAATTAAAAAAATAAAAAATGACAAATAATAGTTAAATAAAAAAAAATCTTATAATTTTCACAACCGAAAATTAATTAGAATTGATAATTAAATAAAAATAACAAATGAGGAATTTGAAGATTAAAAATGGGTAAAAAAGAAAATCAAAAGTTTCTCTCCTAAGTATAAATCAATTAGAATTAATAATTAAATTTTTTAAAAAAATCTTCTAGTTTTCATAAGTGAAAATCAATTAGAATTAATAGTTAAATAAAAATGAAAAATGAGGAATTTGAAGATTAAAAATAAGTAAAAAAAAAATCAAAAGTTTCTCCCTTGAGCTCCTATTATATATAGAGAGAGATAAATATAGATTATAAATTTGAGTTGTCGATGAAATTAAAAGTTTAGAGTGAAAATGATGAAATTCGATAATCGTGTCAAAATTGACTTTTGTCCGTATTAGTATTTTCAACCCCTCACACATCACGTTTTTAATTGTTACACGTAATGCATTAAAAATGAATGACGTGGCCGTCTCTTTCCGGTTTGAGGGTGTGGAAAAGCAAAGCATAAGAAAGACCGTACAGCAATTGAACACGTTCGTTGATCACGAACCAGCCAAGACCAAGTGACAGAGACAGACTTCAATTAAATTAGATTTTATAAAATTTCCAACAAAAGCCACTCTATTTTTTTTTTATTATTATATACTTTTACGTCTGTTCCTAGAATGGATTGTCAAAATTATGTAGAAACGAAATTAATTGCTAGGATTTTCATTAAAAAAAAAAGGTATTTTTATACTTTTGAATCTTTCCTCGATTTTTTTTTTTTTCTTACAACATGTGGAGATGGAAGACTCGAACTACAGATCTATTGATCGTTAATACAATAGTTAGGTCAGAGCTCTACGCTAAAGCTTTCCTCAATTTGATTCTCATTAATTCTCATTTTCTATTACATGGATTCATACAATCATTTTTATTGATTATTTTACATTTTCATTGTTTTCTCTCATCTATAAATGAGACTTTATTAATTATTTTATCATATTCTTTTTCTTATTTAAACTGCTATATAATAAATTTTACTTCATTACATTTAGAGTGTGTTTGGTTTAGTGTTTAATTTTAAAAATAAATCATTTTGAAAAAATTTAGTGTTTGGCAACCACTAAAAATGACTTAATAGAAAATGAGATTGATAAATAAATCATTTTGAGAGAAACACTTAAAACCAACTTTTTAAAAAAGACTTCTTAAATCAACAATAACTTGTGAAGAAAAATATTTGTGAGGAAATGCAACCAAACATATGAGTGTTTAAACTTTAAACAATTTTTATACAAAATGTTTTTTTAAAAAATGCATTCTTGAAAAATATTTAAATTAAAATGTATTCCAAACGGACCATTAATCTCTTTGTAAGATTAAAACTTTTAATTTAATTTGTTAAACGATTAATTGTTTTTTTTAAACATTGTCAAACGATTAATTATTAATTATTTTGTGAAAGTAAAATATTTGTATGAAATACCACATAAAAATAAAATTGATGTAATTTTATTTCAATTATTTTTTACTTTTAATATTAAATAAAGGTTTAAAATTAAATAACATTAAATCAAATAAAATTTAAAAAAAATATATATCATTGATTATTATTATTTTACTTAAAAGTTATATTAAAATATTATTTAATAATGTGTTTTAATTAGTTAAACATATGAATGAATTTTGTAATTATAATATATTACATTTCCATTTCAGTTTTGGATAGTCTTTAGTAAAAAACATCGATTAATTCATGTTTTTTATCAACACTTCTAAAAAAAAAAAAAAAAATCGATGTGTTCCAACTTCATACAGCTCTCTTAACAACAATAAAAGAATAATACTTTCGGTTGATGATCAAATTTCGCTAGGTAAATTACCTTCGCTCCACGTGATAATCGACAGTGAATTTGTTTGAGAGCGGGGGAAGACGTGGCCTGCAAAAGAGAGAACCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTTAAGTCAGAAAATGGAAGGGAGAGCTAGAGAGTAAGAGTAGGGAGTCGAGAATAGAGTTCGGGTCCCCTTCTTCAGTAGCGAAGAGGGGTATAAATATCTGCTCATGCTCCTAGGGTTTTTAGGAATTCGGAGGCATTTCGGGACAAACCAGACGAAACCGAGGCGGCCAAAGGCGATAGGGACCAAGCGGAGTCGGACGGACTCGGCCCGCGGGCCGAGGCCGAGCAGGGGGTCAGGCCAAAACCCGACCCCTTCGGTCTTGGCCCGTCCCACTTGCCGGTTTTGCCTCTTGGGTCCATCTCTCAGCCTGATTTCTTCCCGGTTGTCCTCGTCAGCTCCTTGTACATCGGGGTGGTCCAAAATTTCCTATAACACTTTCAATCATATTCCTACTCATTCAGATTCCCCGTAAATAAACAAGGCTTTAATTCAATCTTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAGCTTTAATTCAATCCAATTGGTCGACATTTGAAAAAGTTGTGTCAAAAATTAAAATAATATCAAAATGTGTTTAATGGATTTCAAATAGAAGAAATTGGTGTGATTTTAGTTTATTGAAATTAGTGAGTTATGTAAATGTGGATCGAGCAGAGGTTAAGGGTGTGTTTGGATTAACTTTTCAAGTGTTTAGAAAATGAGATTGGTAAATAATGTAATATATTATTATTATTTTACTAAAAAGTTATATTAAAATATTATTTAATAATGTGTTTTAATTAGTTAAACATATGAATGAATTTTGTAATTATAATATATTACATTTCCATTTCAGTTTTGGATAGTCTTTTAGTAAACAACATCGATTAATTCATGTTTTTTATCAACACTTCTCAAAAAAAAAAAAAAAAAAAAAAATCGATGTGTTCCAATTTCATACAACTCTCTTAACAACAATAAAAGAATAATACTTTCTGTTGATGATCAAATTTCGCTAGGTAAATTACCTTCGCTCCACGTGATAATCGACAGTGAATTTGTTTGAGAGCGGGGGAAGACGTGGCCTGCAAAAGAGAGAACCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTTAAGTCAGAAAACGGAAGGGAGAGCTAAAGAGTAAGAGTAGGGAGTCGAGAATAGAGTTTGGGTCCCCTTCTTCAGTAGCGAAGATGGGTATAAATACCTGCTCATGCTTCTAGGGTTTTTAGGAATTCGGAGGCGTTTCGGGACAAACCAGGCGAACCCGAGGCAGCCAAAGGCGGTAGGGACCAAGCGGAGTCAGACGGACTCGGCCCGCGCGAACGGGCCGAGGCCGAGTAGGAGGTCGGGCCAAAAACCCGACTCCTTCGGTCTTGGCCCGTCCCACTTGTCGGTTTTGCCTCTTGGGTCCATCTCTCAGCCTGATTTCTCCCCGGTTGTCCTCGTCAGCTCCTTATACATCGGGGTGGTCCAAAATGACCTATAACACTTTCAATCATATTCCTACTCATTCAAATTCCCTGTAAATAAACAAGGCTTTAATTCAATCTTTTCAAAAAAAAAAAAAAAAAAGCTTTAATTCAATCCAATTGGTCAACCTTTGAAAAAATTGTGTCAAAAATTAAAATAATATCAAAATGTGTTTAATGGATTTCAAATGGAAGAAATTGGTGTGATTTTAGTTTATTGAAATTAGTGAGTTATGTAAATGTGGATCGAGCAGAGGTTAAGGGTGTGTTTGGATTAACTTTTCAAGTGTTTAGAAAATGAGATTGGTAAATAATGTAATATATTATTATTATTTTACTTAAAAGTTATATTAAAATATTATTTAATAATGTGTTTTAATTAGTTAAGGAGTTAGTTCTTACAAGATACACCGATTCTGACTTCCAGACTGACAAGGATTCGAGGAAATCTACGTCAAGGTCAGTATTTACCCTTAACGGGGGAGTTGTAGTCTGGAGAAGCATCAAGCAAGGATGCATAGCAGACTCCACAATGGAGGCAGAATATGTAGCTGCTTGTGAAGCAGCTAAGGAAGCTGTTTGGCTGAGAAAGTTCTTGACAGATTTGGAGGTCGTTCCAAATATGAACTTGCCCGTTACATTATACTGTGACAACAGTGGGGCTGTAGCTAATTCTAAAGAACCTCACAGCCACAAACGAGGAAAGCACATCGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACAAGGAGATGTAATCGTTACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGGCTCTCTCGGCTAAAATGTTCGAGGGTCATCTAGAGAGTCTAGGTCTGCGAGAAATGTATATAGTATAA

mRNA sequence

ATGTGTCACAATGTTGCTGCTCCACGTGTCGATCGGTTCAAGGTCCGAGTGTCACAATGTTGCTGCACGTGTCGATCGGTTCGGCCGAAGGTGAAGTCCGCGTTTGACCGTCCTTCCGCGCGCGACGTTGACCGTTTGAAGTGTCGTCAGTTCCGTTTGTTGACCGTTAGTCTCGCCTGCGCGGATTGCTCCTGTTGTGACACGTGGCAGCTGCTTACCTCCTTTTGTGGGAAAGTGGTCGTGGTTATCTCCACGACACAACAACTGTGTTTCTCAACTTCTTCTAACAGTGAGTGCTTGAGCGCCGACAAAAGCTTTGTGACGGCGTTCAATCTGTCTCGCTCTCTCTTGTCTAGTTCGAATCGTGGGTCACGTACGGGAAATGACTGCGGCGGCGTTGCTGAGAGAGAGAGGACGACAATCTGGTCATGGGTATCGCCGACGGGGAGGGAAGAGGAATTCCCTTCTCCTCATTTCGGCATGGGGAACGGGGATGAGAATTCGGAGGCATTTCGGGACAAACCAGACGAAACCGAGGCGGCCAAAGGCGATAGGGACCAAGCGGAGTCGGACGGACTCGGCCCGCGGGCCGAGGCCGAGCAGGGGGTCAGGCCAAAACCCGACCCCTTCGGTCTTGGCCCGTCCCACTTGCCGGTTTTGCCTCTTGGGTCCATCTCTCAGCCTGATTTCTTCCCGGTTGTCCTCGTCAGCTCCTTTAGCGAAGATGGGTATAAATACCTGCTCATGCTTCTAGGGTTTTTAGGAATTCGGAGGCGTTTCGGGACAAACCAGGCGAACCCGAGGCAGCCAAAGGCGGTAGGGACCAAGCGGAGTCAGACGGACTCGGCCCGCGCGAACGGGCCGAGGCCGAGTAGGAGGTCGGGCCAAAAACCCGACTCCTTCGGTCTTGGCCCGTCCCACTTGTCGGTTTTGCCTCTTGGGTCCATCTCTCAGCCTGATTTCTCCCCGGTTGTCCTCACTGACAAGGATTCGAGGAAATCTACGTCAAGGTCAGTATTTACCCTTAACGGGGGAGTTGTAGTCTGGAGAAGCATCAAGCAAGGATGCATAGCAGACTCCACAATGGAGGCAGAATATGTAGCTGCTTGTGAAGCAGCTAAGGAAGCTGTTTGGCTGAGAAAGTTCTTGACAGATTTGGAGGTCGTTCCAAATATGAACTTGCCCGTTACATTATACTGTGACAACAGTGGGGCTGTAGCTAATTCTAAAGAACCTCACAGCCACAAACGAGGAAAGCACATCGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACAAGGAGATGTAATCGTTACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGGCTCTCTCGGCTAAAATGTTCGAGGGTCATCTAGAGAGTCTAGGTCTGCGAGAAATGTATATAGTATAA

Coding sequence (CDS)

ATGTGTCACAATGTTGCTGCTCCACGTGTCGATCGGTTCAAGGTCCGAGTGTCACAATGTTGCTGCACGTGTCGATCGGTTCGGCCGAAGGTGAAGTCCGCGTTTGACCGTCCTTCCGCGCGCGACGTTGACCGTTTGAAGTGTCGTCAGTTCCGTTTGTTGACCGTTAGTCTCGCCTGCGCGGATTGCTCCTGTTGTGACACGTGGCAGCTGCTTACCTCCTTTTGTGGGAAAGTGGTCGTGGTTATCTCCACGACACAACAACTGTGTTTCTCAACTTCTTCTAACAGTGAGTGCTTGAGCGCCGACAAAAGCTTTGTGACGGCGTTCAATCTGTCTCGCTCTCTCTTGTCTAGTTCGAATCGTGGGTCACGTACGGGAAATGACTGCGGCGGCGTTGCTGAGAGAGAGAGGACGACAATCTGGTCATGGGTATCGCCGACGGGGAGGGAAGAGGAATTCCCTTCTCCTCATTTCGGCATGGGGAACGGGGATGAGAATTCGGAGGCATTTCGGGACAAACCAGACGAAACCGAGGCGGCCAAAGGCGATAGGGACCAAGCGGAGTCGGACGGACTCGGCCCGCGGGCCGAGGCCGAGCAGGGGGTCAGGCCAAAACCCGACCCCTTCGGTCTTGGCCCGTCCCACTTGCCGGTTTTGCCTCTTGGGTCCATCTCTCAGCCTGATTTCTTCCCGGTTGTCCTCGTCAGCTCCTTTAGCGAAGATGGGTATAAATACCTGCTCATGCTTCTAGGGTTTTTAGGAATTCGGAGGCGTTTCGGGACAAACCAGGCGAACCCGAGGCAGCCAAAGGCGGTAGGGACCAAGCGGAGTCAGACGGACTCGGCCCGCGCGAACGGGCCGAGGCCGAGTAGGAGGTCGGGCCAAAAACCCGACTCCTTCGGTCTTGGCCCGTCCCACTTGTCGGTTTTGCCTCTTGGGTCCATCTCTCAGCCTGATTTCTCCCCGGTTGTCCTCACTGACAAGGATTCGAGGAAATCTACGTCAAGGTCAGTATTTACCCTTAACGGGGGAGTTGTAGTCTGGAGAAGCATCAAGCAAGGATGCATAGCAGACTCCACAATGGAGGCAGAATATGTAGCTGCTTGTGAAGCAGCTAAGGAAGCTGTTTGGCTGAGAAAGTTCTTGACAGATTTGGAGGTCGTTCCAAATATGAACTTGCCCGTTACATTATACTGTGACAACAGTGGGGCTGTAGCTAATTCTAAAGAACCTCACAGCCACAAACGAGGAAAGCACATCGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACAAGGAGATGTAATCGTTACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGGCTCTCTCGGCTAAAATGTTCGAGGGTCATCTAGAGAGTCTAGGTCTGCGAGAAATGTATATAGTATAA

Protein sequence

MCHNVAAPRVDRFKVRVSQCCCTCRSVRPKVKSAFDRPSARDVDRLKCRQFRLLTVSLACADCSCCDTWQLLTSFCGKVVVVISTTQQLCFSTSSNSECLSADKSFVTAFNLSRSLLSSSNRGSRTGNDCGGVAERERTTIWSWVSPTGREEEFPSPHFGMGNGDENSEAFRDKPDETEAAKGDRDQAESDGLGPRAEAEQGVRPKPDPFGLGPSHLPVLPLGSISQPDFFPVVLVSSFSEDGYKYLLMLLGFLGIRRRFGTNQANPRQPKAVGTKRSQTDSARANGPRPSRRSGQKPDSFGLGPSHLSVLPLGSISQPDFSPVVLTDKDSRKSTSRSVFTLNGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIREIVQQGDVIVTKIASEHNIADPFTKALSAKMFEGHLESLGLREMYIV
Homology
[Close]
BLAST of Lag0032045 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 285.4 bits (729), Expect = 8.9e-73
Identity = 139/149 (93.29%), Postives = 145/149 (97.32%), Query Frame = 0 

Query: 327  TDKDSRKSTSRSVFTLNGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDL 386
            TDKDSRKSTSRSVFTLNGG VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWL+KFL DL
Sbjct: 1086 TDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDL 1145

Query: 387  EVVPNMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIREIVQQGDVIVTKIASEH 446
            EVVPNMNLP+TLYCDNSGAVANSKEP SHKRGKHIERKYHLIREIVQ+GDVIVTKIASEH
Sbjct: 1146 EVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEH 1205

Query: 447  NIADPFTKALSAKMFEGHLESLGLREMYI 476
            NIADPFTK L+AK+FEGHLESLGLR+MYI
Sbjct: 1206 NIADPFTKTLTAKVFEGHLESLGLRDMYI 1234

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BLAST of Lag0032045 vs. NCBI nr
Match: KAA0042496.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 283.9 bits (725), Expect = 2.6e-72
Identity = 139/149 (93.29%), Postives = 144/149 (96.64%), Query Frame = 0 

Query: 327 TDKDSRKSTSRSVFTLNGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDL 386
           TDKDSRKSTS SVFTLNGG VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFL DL
Sbjct: 151 TDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDL 210

Query: 387 EVVPNMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIREIVQQGDVIVTKIASEH 446
           EVVPNMNLP+TLYCDNSGAVANSKEP SHKRGKHIERKYHLIREIVQ+GDVIVTKIASEH
Sbjct: 211 EVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEH 270

Query: 447 NIADPFTKALSAKMFEGHLESLGLREMYI 476
           NIADPFTK L+AK+FEGHLESLGLR+MYI
Sbjct: 271 NIADPFTKTLTAKVFEGHLESLGLRDMYI 299

[Close]
BLAST of Lag0032045 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 283.9 bits (725), Expect = 2.6e-72
Identity = 139/149 (93.29%), Postives = 144/149 (96.64%), Query Frame = 0 

Query: 327  TDKDSRKSTSRSVFTLNGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDL 386
            TDKDSRKSTS SVFTLNGG VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFL DL
Sbjct: 1086 TDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDL 1145

Query: 387  EVVPNMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIREIVQQGDVIVTKIASEH 446
            EVVPNMNLP+TLYCDNSGAVANSKEP SHKRGKHIERKYHLIREIVQ+GDVIVTKIASEH
Sbjct: 1146 EVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEH 1205

Query: 447  NIADPFTKALSAKMFEGHLESLGLREMYI 476
            NIADPFTK L+AK+FEGHLESLGLR+MYI
Sbjct: 1206 NIADPFTKTLTAKVFEGHLESLGLRDMYI 1234

[Close]
BLAST of Lag0032045 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 283.9 bits (725), Expect = 2.6e-72
Identity = 139/149 (93.29%), Postives = 144/149 (96.64%), Query Frame = 0 

Query: 327  TDKDSRKSTSRSVFTLNGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDL 386
            TDKDSRKSTS SVFTLNGG VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFL DL
Sbjct: 960  TDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDL 1019

Query: 387  EVVPNMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIREIVQQGDVIVTKIASEH 446
            EVVPNMNLP+TLYCDNSGAVANSKEP SHKRGKHIERKYHLIREIVQ+GDVIVTKIASEH
Sbjct: 1020 EVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEH 1079

Query: 447  NIADPFTKALSAKMFEGHLESLGLREMYI 476
            NIADPFTK L+AK+FEGHLESLGLR+MYI
Sbjct: 1080 NIADPFTKTLTAKVFEGHLESLGLRDMYI 1108

[Close]
BLAST of Lag0032045 vs. NCBI nr
Match: KAA0058279.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 283.5 bits (724), Expect = 3.4e-72
Identity = 139/149 (93.29%), Postives = 144/149 (96.64%), Query Frame = 0 

Query: 327 TDKDSRKSTSRSVFTLNGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDL 386
           TDKDSRKSTSRSVFTLNGG VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFL DL
Sbjct: 78  TDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDL 137

Query: 387 EVVPNMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIREIVQQGDVIVTKIASEH 446
           EVVPNMNLP+TLYCDNSGAVANSKEP SHKRGKHIERKYHLI EIVQ+GDVIVTKIASEH
Sbjct: 138 EVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIWEIVQRGDVIVTKIASEH 197

Query: 447 NIADPFTKALSAKMFEGHLESLGLREMYI 476
           NIADPFTK L+AK+FEGHLESLGLR+MYI
Sbjct: 198 NIADPFTKTLTAKVFEGHLESLGLRDMYI 226

[Close]
BLAST of Lag0032045 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.9e-23
Identity = 59/143 (41.26%), Postives = 85/143 (59.44%), Query Frame = 0 

Query: 328  DKDSRKSTSRSVFTLNGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDLE 387
            D D+RKS++  +FT +GG + W+S  Q C+A ST EAEY+AA E  KE +WL++FL +L 
Sbjct: 1186 DIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELG 1245

Query: 388  VVPNMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIREIVQQGDVIVTKIASEHN 447
            +         +YCD+  A+  SK    H R KHI+ +YH IRE+V    + V KI++  N
Sbjct: 1246 L---HQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNEN 1305

Query: 448  IADPFTKALSAKMFEGHLESLGL 471
             AD  TK +    FE   E +G+
Sbjct: 1306 PADMLTKVVPRNKFELCKELVGM 1325

[Close]
BLAST of Lag0032045 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 101.7 bits (252), Expect = 2.4e-20
Identity = 54/140 (38.57%), Postives = 83/140 (59.29%), Query Frame = 0 

Query: 332  RKSTSRSVFTL-NGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVP 391
            RKST+  +F + +  ++ W + +Q  +A S+ EAEY+A  EA +EA+WL+  LT + +  
Sbjct: 1263 RKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI-- 1322

Query: 392  NMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIREIVQQGDVIVTKIASEHNIAD 451
             +  P+ +Y DN G ++ +  P  HKR KHI+ KYH  RE VQ   + +  I +E+ +AD
Sbjct: 1323 KLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLAD 1382

Query: 452  PFTKALSAKMFEGHLESLGL 471
             FTK L A  F    + LGL
Sbjct: 1383 IFTKPLPAARFVELRDKLGL 1400

[Close]
BLAST of Lag0032045 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 8.0e-08
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 0 

Query: 296 QKPDSFGLGPSHLSVLPLGSISQPDFSPVVLTDKDSRKSTSRSVFTLNGGVVVWRSIKQG 355
           Q   ++GL  +      L   S  D++     D +SR+STS  +F LNGG V WRS KQ 
Sbjct: 54  QSTQTYGLEFTRAGTAKLVGYSDADWA----GDVESRRSTSGYLFKLNGGCVSWRSKKQR 113

Query: 356 CIADSTMEAEYVAACEAAKEAVWL 380
            +A S+ E EY+A  EA +EAVWL
Sbjct: 114 TVALSSTEDEYMALSEATQEAVWL 133

[Close]
BLAST of Lag0032045 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 4.3e-73
Identity = 139/149 (93.29%), Postives = 145/149 (97.32%), Query Frame = 0 

Query: 327  TDKDSRKSTSRSVFTLNGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDL 386
            TDKDSRKSTSRSVFTLNGG VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWL+KFL DL
Sbjct: 1086 TDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDL 1145

Query: 387  EVVPNMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIREIVQQGDVIVTKIASEH 446
            EVVPNMNLP+TLYCDNSGAVANSKEP SHKRGKHIERKYHLIREIVQ+GDVIVTKIASEH
Sbjct: 1146 EVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEH 1205

Query: 447  NIADPFTKALSAKMFEGHLESLGLREMYI 476
            NIADPFTK L+AK+FEGHLESLGLR+MYI
Sbjct: 1206 NIADPFTKTLTAKVFEGHLESLGLRDMYI 1234

[Close]
BLAST of Lag0032045 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.3e-72
Identity = 139/149 (93.29%), Postives = 144/149 (96.64%), Query Frame = 0 

Query: 327  TDKDSRKSTSRSVFTLNGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDL 386
            TDKDSRKSTS SVFTLNGG VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFL DL
Sbjct: 1086 TDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDL 1145

Query: 387  EVVPNMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIREIVQQGDVIVTKIASEH 446
            EVVPNMNLP+TLYCDNSGAVANSKEP SHKRGKHIERKYHLIREIVQ+GDVIVTKIASEH
Sbjct: 1146 EVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEH 1205

Query: 447  NIADPFTKALSAKMFEGHLESLGLREMYI 476
            NIADPFTK L+AK+FEGHLESLGLR+MYI
Sbjct: 1206 NIADPFTKTLTAKVFEGHLESLGLRDMYI 1234

[Close]
BLAST of Lag0032045 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.3e-72
Identity = 139/149 (93.29%), Postives = 144/149 (96.64%), Query Frame = 0 

Query: 327  TDKDSRKSTSRSVFTLNGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDL 386
            TDKDSRKSTS SVFTLNGG VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFL DL
Sbjct: 960  TDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDL 1019

Query: 387  EVVPNMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIREIVQQGDVIVTKIASEH 446
            EVVPNMNLP+TLYCDNSGAVANSKEP SHKRGKHIERKYHLIREIVQ+GDVIVTKIASEH
Sbjct: 1020 EVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEH 1079

Query: 447  NIADPFTKALSAKMFEGHLESLGLREMYI 476
            NIADPFTK L+AK+FEGHLESLGLR+MYI
Sbjct: 1080 NIADPFTKTLTAKVFEGHLESLGLRDMYI 1108

[Close]
BLAST of Lag0032045 vs. ExPASy TrEMBL
Match: A0A5A7TKM4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00470 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.3e-72
Identity = 139/149 (93.29%), Postives = 144/149 (96.64%), Query Frame = 0 

Query: 327 TDKDSRKSTSRSVFTLNGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDL 386
           TDKDSRKSTS SVFTLNGG VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFL DL
Sbjct: 151 TDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDL 210

Query: 387 EVVPNMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIREIVQQGDVIVTKIASEH 446
           EVVPNMNLP+TLYCDNSGAVANSKEP SHKRGKHIERKYHLIREIVQ+GDVIVTKIASEH
Sbjct: 211 EVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEH 270

Query: 447 NIADPFTKALSAKMFEGHLESLGLREMYI 476
           NIADPFTK L+AK+FEGHLESLGLR+MYI
Sbjct: 271 NIADPFTKTLTAKVFEGHLESLGLRDMYI 299

[Close]
BLAST of Lag0032045 vs. ExPASy TrEMBL
Match: A0A5A7UXM9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006080 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.6e-72
Identity = 139/149 (93.29%), Postives = 144/149 (96.64%), Query Frame = 0 

Query: 327 TDKDSRKSTSRSVFTLNGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDL 386
           TDKDSRKSTSRSVFTLNGG VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFL DL
Sbjct: 78  TDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDL 137

Query: 387 EVVPNMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIREIVQQGDVIVTKIASEH 446
           EVVPNMNLP+TLYCDNSGAVANSKEP SHKRGKHIERKYHLI EIVQ+GDVIVTKIASEH
Sbjct: 138 EVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIWEIVQRGDVIVTKIASEH 197

Query: 447 NIADPFTKALSAKMFEGHLESLGLREMYI 476
           NIADPFTK L+AK+FEGHLESLGLR+MYI
Sbjct: 198 NIADPFTKTLTAKVFEGHLESLGLRDMYI 226

[Close]
BLAST of Lag0032045 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 71.2 bits (173), Expect = 2.5e-12
Identity = 37/102 (36.27%), Postives = 59/102 (57.84%), Query Frame = 0 

Query: 329 KDSRKSTSRSVFTLNGGVVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEV 388
           KD+R+ST+     L   ++ W+S KQ  ++ S+ EAEY A   A  E +WL +F  +L++
Sbjct: 454 KDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL 513

Query: 389 VPNMNLPVTLYCDNSGAVANSKEPHSHKRGKHIERKYHLIRE 431
              ++ P  L+CDN+ A+  +     H+R KHIE   H +RE
Sbjct: 514 --PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

The following BLAST results are available for this feature:
BLAST of Lag0032045 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0035907.18.9e-7393.29gag/pol protein [Cucumis melo var. makuwa][more]
KAA0042496.12.6e-7293.29gag/pol protein [Cucumis melo var. makuwa][more]
KAA0025945.12.6e-7293.29gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi... [more]
KAA0059226.12.6e-7293.29gag/pol protein [Cucumis melo var. makuwa][more]
KAA0058279.13.4e-7293.29gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of Lag0032045 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109783.9e-2341.26Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041462.4e-2038.57Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P0CV728.0e-0842.86Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... [more]
BLAST of Lag0032045 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T2V94.3e-7393.29Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760... [more]
A0A5A7TZD01.3e-7293.29Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000... [more]
A0A5A7UYE81.3e-7293.29Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015... [more]
A0A5A7TKM41.3e-7293.29Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G0047... [more]
A0A5A7UXM91.6e-7293.29Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G0060... [more]
BLAST of Lag0032045 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.12.5e-1236.27cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..301
NoneNo IPR availablePANTHERPTHR11439:SF355CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8coord: 337..470
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 337..470
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 327..459
e-value: 3.64738E-61
score: 194.224

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0032045.1Lag0032045.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding