Lag0031891 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCGTTGCTGCCTTCTCCCTCGTTCACTCTAGGATGCGATTCTCTCTTATGGTTGCATCTCTCAAGCGGTCCTTTTTCAGTAGCTTCAGCACGCCTTTCTTTTTGGGATATCTCTTCTACTCGTCGTGCCCAGGTGGACCCAAATATTCTTACAAATTTGTGGCGTGCAACGATCCCAAAGAAAGTCGGATTCTTTATGTGGACAGTGCTTCACCGTCGGCTTCACACGGCTGATCGTCTGCAAAGAGTTTTTCAACATTCCGCCTTAAGCCCAAATGTTTGCTCTATCTGCCACGCAAACTCAGAATCATTGGATCACCTTTTTGCTCTCTGCCCGTTGGTTTCTGGTATGTGGGTTCAGATTTTTCAAGCTTCGGATGCTCAATTTCCCATCCCTTCTCAAGCTCATATGCTCTGTGAGGAGGCTTTTTCTTTCAAGATTCGCTCTCAAAGGGGTTTGCTTTTCCAAGCTCTGATTGTGGCTACCTTTTGGGTTATTTGGAATGAGCGGAATAGTAGAATCTTTTGA ATGGCCTCGTTGCTGCCTTCTCCCTCGTTCACTCTAGGATGCGATTCTCTCTTATGGTTGCATCTCTCAAGCGGTCCTTTTTCAGTAGCTTCAGCACGCCTTTCTTTTTGGGATATCTCTTCTACTCGTCGTGCCCAGGTGGACCCAAATATTCTTACAAATTTGTGGCGTGCAACGATCCCAAAGAAAGTCGGATTCTTTATGTGGACAGTGCTTCACCGTCGGCTTCACACGGCTGATCGTCTGCAAAGAGTTTTTCAACATTCCGCCTTAAGCCCAAATGTTTGCTCTATCTGCCACGCAAACTCAGAATCATTGGATCACCTTTTTGCTCTCTGCCCGTTGGTTTCTGGTATGTGGGTTCAGATTTTTCAAGCTTCGGATGCTCAATTTCCCATCCCTTCTCAAGCTCATATGCTCTGTGAGGAGGCTTTTTCTTTCAAGATTCGCTCTCAAAGGGGTTTGCTTTTCCAAGCTCTGATTGTGGCTACCTTTTGGGTTATTTGGAATGAGCGGAATAGTAGAATCTTTTGA ATGGCCTCGTTGCTGCCTTCTCCCTCGTTCACTCTAGGATGCGATTCTCTCTTATGGTTGCATCTCTCAAGCGGTCCTTTTTCAGTAGCTTCAGCACGCCTTTCTTTTTGGGATATCTCTTCTACTCGTCGTGCCCAGGTGGACCCAAATATTCTTACAAATTTGTGGCGTGCAACGATCCCAAAGAAAGTCGGATTCTTTATGTGGACAGTGCTTCACCGTCGGCTTCACACGGCTGATCGTCTGCAAAGAGTTTTTCAACATTCCGCCTTAAGCCCAAATGTTTGCTCTATCTGCCACGCAAACTCAGAATCATTGGATCACCTTTTTGCTCTCTGCCCGTTGGTTTCTGGTATGTGGGTTCAGATTTTTCAAGCTTCGGATGCTCAATTTCCCATCCCTTCTCAAGCTCATATGCTCTGTGAGGAGGCTTTTTCTTTCAAGATTCGCTCTCAAAGGGGTTTGCTTTTCCAAGCTCTGATTGTGGCTACCTTTTGGGTTATTTGGAATGAGCGGAATAGTAGAATCTTTTGA MASLLPSPSFTLGCDSLLWLHLSSGPFSVASARLSFWDISSTRRAQVDPNILTNLWRATIPKKVGFFMWTVLHRRLHTADRLQRVFQHSALSPNVCSICHANSESLDHLFALCPLVSGMWVQIFQASDAQFPIPSQAHMLCEEAFSFKIRSQRGLLFQALIVATFWVIWNERNSRIF Homology
BLAST of Lag0031891 vs. NCBI nr
Match: RVW27524.1 (putative ribonuclease H protein [Vitis vinifera]) HSP 1 Score: 109.8 bits (273), Expect = 2.5e-20 Identity = 60/164 (36.59%), Postives = 92/164 (56.10%), Query Frame = 0
BLAST of Lag0031891 vs. NCBI nr
Match: RVW74148.1 (putative ribonuclease H protein [Vitis vinifera]) HSP 1 Score: 109.4 bits (272), Expect = 3.3e-20 Identity = 60/164 (36.59%), Postives = 91/164 (55.49%), Query Frame = 0
BLAST of Lag0031891 vs. NCBI nr
Match: CAN68165.1 (hypothetical protein VITISV_008538 [Vitis vinifera]) HSP 1 Score: 109.4 bits (272), Expect = 3.3e-20 Identity = 60/164 (36.59%), Postives = 91/164 (55.49%), Query Frame = 0
BLAST of Lag0031891 vs. NCBI nr
Match: KAA0044556.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 109.0 bits (271), Expect = 4.2e-20 Identity = 60/173 (34.68%), Postives = 90/173 (52.02%), Query Frame = 0
BLAST of Lag0031891 vs. NCBI nr
Match: KAA0041397.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 109.0 bits (271), Expect = 4.2e-20 Identity = 60/173 (34.68%), Postives = 90/173 (52.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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