Lag0031875 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGTTTTGGACCATATCCCAAGGAAGGTAACCCCAGAGATGAACCAAAGTCTAATGGCTCTGTTTACACGATCTGAGGTGGAAAGTGTAGTTAAGTGTTTTCATCCAACCAAAGCTCCTGGTTTAGATGGGTTTCCTGTTGTATTCTATCAGAAATACTGGGATATTGTGGGACCAACGACGGTGGATGAATGCTTGGCTATATTGAACCAAAAGGTATCTATCCAGGCCTGGAATCATACGAATATTGTGTTCATTCCCAAGATCTCCAATGCAAGGTTAGTGTCTGACTTTTGGCCCATTAGCCTCTGTAATGTTTCTTATAAGATAGTTATTAAAGTCATTGCCAACATATTACGCTTAGTGTCAAATGATATAATTGATGAGGGGCAATCTGCCTTTATTCCTTGTCGATTTATCTCAGATAACATGATTATTGGCCATGAGACTTTACATTTTTTAAATAAGAAGCGTAGAGGCAAAACAGGTTACGCTGCTATTAAAATAGATATGAGTAAAACGTACGATAGGGTGGAGTGGTCTTACATTCAGCAAATTATGCTTAAACTAGGCTTCCACCCTGATTGGATCCACCTGATAATAAGGTGTGTTATGAGTTCTACTTTCTCGATAATCTTGAATGGGGAGGTTTTTGGTCATATTAAGCCATCGAGAGGTCTCAGACAGGGGATCCTTTATCCCCTTATTTATTCCTTTTGTGTTCTGAAGGTTTATCGGCTATGCTTGATTCTGCTAAGAACTTAACTATTTTTGGTATTGCAATAGCCAGAAGGTGTAAAAAAATCTCTCATCTATTCTTTGCAGATGATAGTTTGGTTTTCCTCAAGGCTTCAGAAGGGGAATTTGAGGCTTTCCAATCCATCATGATGAAATATGAGAAGGCGTCTGGGCAATGCATATATCCGAGCAAGTCAATGGTGTTTTATTCCAAAAATTTTCATACAAACCTATGGTCTGTCCACTGTAATAAACTGAACATGAATGAGGTTGATAATTTGGGTAGATATCTTGGATTGCCATCTCTTTTTAACAAAGGGAAAATCAAGGATTTTAAATTCTTGATTGACAGGGTTTGGAAGAATATTTTCTTTTCGGGAGGGAGAAAGGAAGTCCTCATTAAGAGCGTTGTGCAACCTATTCCTACGTACGCTATGGGATGTTTCAGGATTCCGAAAGGTATACTTTCAAAGATATCCTTTATGTGTGCCAAATTTTGGTGGGGATCTAGGGGGAGAAACGCAAGATCCATTGGCGACAATGGGGGGAGCTCTGTAAACCTAAGGAACTGGGAGGTCCCAATTTCCAGGACATGAGTTGCTTTAATCAGGCCATGTGCTTGCCAAACATGCATGGAGGATTTTTGAATTTCCTGATATTACTCTTTCGAAGGTTTTAAAAAGTCGATATTCCCCTCAATCTTCTTTGTTAGAGGTGTCATCTTCTCCTTCATCTTCTTTCTTTTGGAAAGGTATGGTATGAAGTTTGGATTTGTTGAAAGGGGGTATTAGACTGAACTTAGGTAATGCTAAGAATATTAAAATGTTCCAGGATCCATGGATTCCCCGACCATGTCACCAGGGTGGATACAGTGTGTCGAATGTGCCTATAGCAGATTTCATTACTCCTTCAGCTCAATAGAATGTCTGTAAATTAAATAATCTTCTTTGTCAGGCGAACGTCGAGGAGATTATTAGAATACCGATAAGCGCGACGATGTAAGACACTTGGATTTGGAAATTCGATAAGAGAGGAAAGTACACTGTCAAAAGTGGTTATAAGTTGGGAATGATGAGAAATCAGGAAGCAATTTCCTCTATCACTAAGGATCAAAGGTGGTGGAAGAAATTGTGGCATCTGAATATACCAAACAAGGTTAAACATTTTGTGTGGAAAGCATTTCATCAAGCTATTTGATAAGACCAATTTATTATACACTTAGAATCTCCAAATTTGTTTATCTTAGTTGAATTCCTTGCGAAAAATGCTTTAAAATGAGTATAATATGTCTATAGGTCCTCACTGGAGCTTTGGAAGCAATTCGGGGCTTAATCGAGCGAAACTGGAGCGTAAAATGACCATTCTGCCCCTGGAGCCTCACCAGCGTCGAGACACTCGTCATCAGGGTCGAGACGCTTGCCCACAGCGTCGCGACGCTAGGGCAATCCGAGAGATATTTTCCAAAATTGAAGGGGACAGCGTCGCGACGCTAGGCAGTTTTCCAGAATTGAAATTTTCAAATTTGGCTGGAATTTTTCCATGTTTGAAGACCCAATTCAACACCATTCTACCACGAATTGAAGGCCAAGAAGCTCTATAA ATGGCAGTTTTGGACCATATCCCAAGGAAGGTAACCCCAGAGATGAACCAAAGTCTAATGGCTCTGTTTACACGATCTGAGGTGGAAAGTGTAGTTAAGTGTTTTCATCCAACCAAAGCTCCTGGTTTAGATGGGTTTCCTGTTGTATTCTATCAGAAATACTGGGATATTGTGGGACCAACGACGGTGGATGAATGCTTGGCTATATTGAACCAAAAGGTATCTATCCAGGCCTGGAATCATACGAATATTGTGTTCATTCCCAAGATCTCCAATGCAAGGTTAGTGTCTGACTTTTGGCCCATTAGCCTCTGTAATGTTTCTTATAAGATAGTTATTAAAGTCATTGCCAACATATTACGCTTAGTGTCAAATGATATAATTGATGAGGGGCAATCTGCCTTTATTCCTTGTCGATTTATCTCAGATAACATGATTATTGGCCATGAGACTTTACATTTTTTAAATAAGAAGCGTAGAGGCAAAACAGGTTTATCGGCTATGCTTGATTCTGCTAAGAACTTAACTATTTTTGGTATTGCAATAGCCAGAAGGTGTAAAAAAATCTCTCATCTATTCTTTGCAGATGATAGTTTGGTTTTCCTCAAGGCTTCAGAAGGGGAATTTGAGGCTTTCCAATCCATCATGATGAAATATGAGAAGGCGTCTGGGCAATGCATATATCCGAGCAAGTCAATGGTGTTTTATTCCAAAAATTTTCATACAAACCTATGGTCTGTCCACTGTAATAAACTGAACATGAATGAGGTTGATAATTTGGGTAGATATCTTGGATTGCCATCTCTTTTTAACAAAGGGAAAATCAAGGATTTTAAATTCTTGATTGACAGGGTTTGGAAGAATATTTTCTTTTCGGGAGGGAGAAAGGAAGTCCTCATTAAGAGCGTTGTGCAACCTATTCCTACGTACGCTATGGGATGTTTCAGGATTCCGAAAGGCCATGTGCTTGCCAAACATGCATGGAGGATTTTTGAATTTCCTGATATTACTCTTTCGAAGGTTTTAAAAAGTCGATATTCCCCTCAATCTTCTTTGTTAGAGGTGTCATCTTCTCCTTCATCTTCTTTCTTTTGGAAAGGATCCATGGATTCCCCGACCATGTCACCAGGGTGGATACAGTGTGTCGAATGTGCCTATAGCAGATTTCATTACTCCTTCAGCTCAATAGAATGTCCTCACTGGAGCTTTGGAAGCAATTCGGGGCTTAATCGAGCGAAACTGGAGCGTAAAATGACCATTCTGCCCCTGGAGCCTCACCAGCGTCGAGACACTCGTCATCAGGGTCGAGACGCTTGCCCACAGCGTCGCGACGCTAGGGCAATCCGAGAGATATTTTCCAAAATTGAAGGGGACAGCGTCGCGACGCTAGGCAGTTTTCCAGAATTGAAATTTTCAAATTTGGCTGGAATTTTTCCATGTTTGAAGACCCAATTCAACACCATTCTACCACGAATTGAAGGCCAAGAAGCTCTATAA ATGGCAGTTTTGGACCATATCCCAAGGAAGGTAACCCCAGAGATGAACCAAAGTCTAATGGCTCTGTTTACACGATCTGAGGTGGAAAGTGTAGTTAAGTGTTTTCATCCAACCAAAGCTCCTGGTTTAGATGGGTTTCCTGTTGTATTCTATCAGAAATACTGGGATATTGTGGGACCAACGACGGTGGATGAATGCTTGGCTATATTGAACCAAAAGGTATCTATCCAGGCCTGGAATCATACGAATATTGTGTTCATTCCCAAGATCTCCAATGCAAGGTTAGTGTCTGACTTTTGGCCCATTAGCCTCTGTAATGTTTCTTATAAGATAGTTATTAAAGTCATTGCCAACATATTACGCTTAGTGTCAAATGATATAATTGATGAGGGGCAATCTGCCTTTATTCCTTGTCGATTTATCTCAGATAACATGATTATTGGCCATGAGACTTTACATTTTTTAAATAAGAAGCGTAGAGGCAAAACAGGTTTATCGGCTATGCTTGATTCTGCTAAGAACTTAACTATTTTTGGTATTGCAATAGCCAGAAGGTGTAAAAAAATCTCTCATCTATTCTTTGCAGATGATAGTTTGGTTTTCCTCAAGGCTTCAGAAGGGGAATTTGAGGCTTTCCAATCCATCATGATGAAATATGAGAAGGCGTCTGGGCAATGCATATATCCGAGCAAGTCAATGGTGTTTTATTCCAAAAATTTTCATACAAACCTATGGTCTGTCCACTGTAATAAACTGAACATGAATGAGGTTGATAATTTGGGTAGATATCTTGGATTGCCATCTCTTTTTAACAAAGGGAAAATCAAGGATTTTAAATTCTTGATTGACAGGGTTTGGAAGAATATTTTCTTTTCGGGAGGGAGAAAGGAAGTCCTCATTAAGAGCGTTGTGCAACCTATTCCTACGTACGCTATGGGATGTTTCAGGATTCCGAAAGGCCATGTGCTTGCCAAACATGCATGGAGGATTTTTGAATTTCCTGATATTACTCTTTCGAAGGTTTTAAAAAGTCGATATTCCCCTCAATCTTCTTTGTTAGAGGTGTCATCTTCTCCTTCATCTTCTTTCTTTTGGAAAGGATCCATGGATTCCCCGACCATGTCACCAGGGTGGATACAGTGTGTCGAATGTGCCTATAGCAGATTTCATTACTCCTTCAGCTCAATAGAATGTCCTCACTGGAGCTTTGGAAGCAATTCGGGGCTTAATCGAGCGAAACTGGAGCGTAAAATGACCATTCTGCCCCTGGAGCCTCACCAGCGTCGAGACACTCGTCATCAGGGTCGAGACGCTTGCCCACAGCGTCGCGACGCTAGGGCAATCCGAGAGATATTTTCCAAAATTGAAGGGGACAGCGTCGCGACGCTAGGCAGTTTTCCAGAATTGAAATTTTCAAATTTGGCTGGAATTTTTCCATGTTTGAAGACCCAATTCAACACCATTCTACCACGAATTGAAGGCCAAGAAGCTCTATAA MAVLDHIPRKVTPEMNQSLMALFTRSEVESVVKCFHPTKAPGLDGFPVVFYQKYWDIVGPTTVDECLAILNQKVSIQAWNHTNIVFIPKISNARLVSDFWPISLCNVSYKIVIKVIANILRLVSNDIIDEGQSAFIPCRFISDNMIIGHETLHFLNKKRRGKTGLSAMLDSAKNLTIFGIAIARRCKKISHLFFADDSLVFLKASEGEFEAFQSIMMKYEKASGQCIYPSKSMVFYSKNFHTNLWSVHCNKLNMNEVDNLGRYLGLPSLFNKGKIKDFKFLIDRVWKNIFFSGGRKEVLIKSVVQPIPTYAMGCFRIPKGHVLAKHAWRIFEFPDITLSKVLKSRYSPQSSLLEVSSSPSSSFFWKGSMDSPTMSPGWIQCVECAYSRFHYSFSSIECPHWSFGSNSGLNRAKLERKMTILPLEPHQRRDTRHQGRDACPQRRDARAIREIFSKIEGDSVATLGSFPELKFSNLAGIFPCLKTQFNTILPRIEGQEAL Homology
BLAST of Lag0031875 vs. NCBI nr
Match: XP_030939512.1 (uncharacterized protein LOC115964316 [Quercus lobata]) HSP 1 Score: 256.5 bits (654), Expect = 4.6e-64 Identity = 164/480 (34.17%), Postives = 228/480 (47.50%), Query Frame = 0
BLAST of Lag0031875 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber]) HSP 1 Score: 255.4 bits (651), Expect = 1.0e-63 Identity = 165/502 (32.87%), Postives = 224/502 (44.62%), Query Frame = 0
BLAST of Lag0031875 vs. NCBI nr
Match: XP_030933459.1 (uncharacterized protein LOC115959256 [Quercus lobata]) HSP 1 Score: 255.0 bits (650), Expect = 1.3e-63 Identity = 157/432 (36.34%), Postives = 220/432 (50.93%), Query Frame = 0
BLAST of Lag0031875 vs. NCBI nr
Match: XP_023878301.1 (uncharacterized protein LOC111990748 [Quercus suber]) HSP 1 Score: 253.8 bits (647), Expect = 3.0e-63 Identity = 169/502 (33.67%), Postives = 228/502 (45.42%), Query Frame = 0
BLAST of Lag0031875 vs. NCBI nr
Match: XP_030487384.1 (uncharacterized protein LOC115704310 [Cannabis sativa]) HSP 1 Score: 253.4 bits (646), Expect = 3.9e-63 Identity = 159/461 (34.49%), Postives = 220/461 (47.72%), Query Frame = 0
BLAST of Lag0031875 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 5.1e-13 Identity = 46/156 (29.49%), Postives = 75/156 (48.08%), Query Frame = 0
BLAST of Lag0031875 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.3e-08 Identity = 40/130 (30.77%), Postives = 66/130 (50.77%), Query Frame = 0
BLAST of Lag0031875 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 1.1e-07 Identity = 50/177 (28.25%), Postives = 83/177 (46.89%), Query Frame = 0
BLAST of Lag0031875 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 7.1e-07 Identity = 39/133 (29.32%), Postives = 64/133 (48.12%), Query Frame = 0
BLAST of Lag0031875 vs. ExPASy TrEMBL
Match: A0A2N9F204 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9035 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 2.1e-70 Identity = 162/426 (38.03%), Postives = 227/426 (53.29%), Query Frame = 0
BLAST of Lag0031875 vs. ExPASy TrEMBL
Match: A0A2N9HLP3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40513 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 8.8e-69 Identity = 161/436 (36.93%), Postives = 222/436 (50.92%), Query Frame = 0
BLAST of Lag0031875 vs. ExPASy TrEMBL
Match: A0A2N9HE46 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37832 PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 9.1e-66 Identity = 158/455 (34.73%), Postives = 224/455 (49.23%), Query Frame = 0
BLAST of Lag0031875 vs. ExPASy TrEMBL
Match: A0A2N9IXD3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57918 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 4.5e-65 Identity = 154/428 (35.98%), Postives = 219/428 (51.17%), Query Frame = 0
BLAST of Lag0031875 vs. ExPASy TrEMBL
Match: A0A2N9G258 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21302 PE=3 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 3.8e-64 Identity = 166/474 (35.02%), Postives = 221/474 (46.62%), Query Frame = 0
BLAST of Lag0031875 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein ) HSP 1 Score: 57.4 bits (137), Expect = 3.8e-08 Identity = 32/110 (29.09%), Postives = 51/110 (46.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|