Lag0030646 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAATGTTCAACTTTTGATGACCGTAGATGCTGATGGAGGCGTTTGTGCAAGTTTCCCGGTAAGTTTTCGTGCAAGTCAATTGAAAAATTAAAAGAAAATTGTAATTAACATTTGCATACTGTTTTTTGTTCATTCCATTTAATATCAAAGGCAAGTCCGCACATCTGCTTTAACAAGGATTGGGCCCTTTTTGCTGTTTCTAGCAATGAGAATGGAATTAAAATCTTAGCAAATGTGGATGGAATCCAACTATTGCAAGCATTTGAAAATCTTTCTTATGATGCATCTAGAACGTCAGAGGCCGGGATAAAGGTAGTTTGATTCTATGTTCAATTAATGTGACTTTTAACCATGTTAATTCTTGTGCTTAATATCTAATTAACTTATATTTAATTTTTGCAGCCCACAGTAAATCTAATTTCAACTGCTACTTGTAGTGTAGGCCTTGCTGAGAGAGCATAG ATGGACAATGTTCAACTTTTGATGACCGTAGATGCTGATGGAGGCGTTTGTGCAAGTTTCCCGGCAAGTCCGCACATCTGCTTTAACAAGGATTGGGCCCTTTTTGCTGTTTCTAGCAATGAGAATGGAATTAAAATCTTAGCAAATGTGGATGGAATCCAACTATTGCAAGCATTTGAAAATCTTTCTTATGATGCATCTAGAACGTCAGAGGCCGGGATAAAGCCCACAGTAAATCTAATTTCAACTGCTACTTGTAGTGTAGGCCTTGCTGAGAGAGCATAG ATGGACAATGTTCAACTTTTGATGACCGTAGATGCTGATGGAGGCGTTTGTGCAAGTTTCCCGGCAAGTCCGCACATCTGCTTTAACAAGGATTGGGCCCTTTTTGCTGTTTCTAGCAATGAGAATGGAATTAAAATCTTAGCAAATGTGGATGGAATCCAACTATTGCAAGCATTTGAAAATCTTTCTTATGATGCATCTAGAACGTCAGAGGCCGGGATAAAGCCCACAGTAAATCTAATTTCAACTGCTACTTGTAGTGTAGGCCTTGCTGAGAGAGCATAG MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLAERA Homology
BLAST of Lag0030646 vs. NCBI nr
Match: PON51665.1 (Topless-like WD40 repeat containing protein [Parasponia andersonii]) HSP 1 Score: 125.6 bits (314), Expect = 2.3e-25 Identity = 66/94 (70.21%), Postives = 76/94 (80.85%), Query Frame = 0
BLAST of Lag0030646 vs. NCBI nr
Match: XP_023526905.1 (protein TPR3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 122.5 bits (306), Expect = 2.0e-24 Identity = 65/91 (71.43%), Postives = 70/91 (76.92%), Query Frame = 0
BLAST of Lag0030646 vs. NCBI nr
Match: KAG7018371.1 (Protein TOPLESS [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 122.5 bits (306), Expect = 2.0e-24 Identity = 65/91 (71.43%), Postives = 70/91 (76.92%), Query Frame = 0
BLAST of Lag0030646 vs. NCBI nr
Match: XP_022955701.1 (protein TOPLESS [Cucurbita moschata]) HSP 1 Score: 122.5 bits (306), Expect = 2.0e-24 Identity = 65/91 (71.43%), Postives = 70/91 (76.92%), Query Frame = 0
BLAST of Lag0030646 vs. NCBI nr
Match: XP_022980163.1 (protein TOPLESS [Cucurbita maxima]) HSP 1 Score: 122.5 bits (306), Expect = 2.0e-24 Identity = 65/91 (71.43%), Postives = 70/91 (76.92%), Query Frame = 0
BLAST of Lag0030646 vs. ExPASy Swiss-Prot
Match: Q10NY2 (Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.7e-18 Identity = 50/95 (52.63%), Postives = 65/95 (68.42%), Query Frame = 0
BLAST of Lag0030646 vs. ExPASy Swiss-Prot
Match: Q94AI7 (Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 5.6e-14 Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = 0
BLAST of Lag0030646 vs. ExPASy Swiss-Prot
Match: Q0J7U6 (Protein TOPLESS-RELATED PROTEIN 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR2 PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 3.6e-13 Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of Lag0030646 vs. ExPASy Swiss-Prot
Match: Q0WV90 (Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3) HSP 1 Score: 74.7 bits (182), Expect = 6.2e-13 Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of Lag0030646 vs. ExPASy Swiss-Prot
Match: Q9LRZ0 (Topless-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=TPR2 PE=1 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 2.6e-11 Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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