Lag0030177 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0030177
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Protein GLUTAMINE DUMPER like
Location	chr8: 45136720 .. 45137037 (-)
RNA-Seq Expression	Lag0030177
Synteny	Lag0030177

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGGAATGAGATCATTAGCCGCCACCGCCACCGCCACCGCCATGAAAACCGGCCACCACCACCTCTGGAACACTCCGATACCTTATCTCTTCGGCGGAATAGCCCTAACTCTGCTTCTCATCCTCACCGCATTGATTTTCCTCGTTTGCTCTTACCGGAAACGCTCTTCTTCCGACGAAGACCACCAGAAGACGAAGATCGAAACGCCAGCGAAAACGCCCGACGATCTGCAACCTAAAATCGTCGTCATAATGGCCGGAAATCACACGCCGACGTTCCTCGCTACCGCTACTACGCCTTCCGTTTCTTCTTAA

mRNA sequence

ATGAGAGGAATGAGATCATTAGCCGCCACCGCCACCGCCACCGCCATGAAAACCGGCCACCACCACCTCTGGAACACTCCGATACCTTATCTCTTCGGCGGAATAGCCCTAACTCTGCTTCTCATCCTCACCGCATTGATTTTCCTCGTTTGCTCTTACCGGAAACGCTCTTCTTCCGACGAAGACCACCAGAAGACGAAGATCGAAACGCCAGCGAAAACGCCCGACGATCTGCAACCTAAAATCGTCGTCATAATGGCCGGAAATCACACGCCGACGTTCCTCGCTACCGCTACTACGCCTTCCGTTTCTTCTTAA

Coding sequence (CDS)

ATGAGAGGAATGAGATCATTAGCCGCCACCGCCACCGCCACCGCCATGAAAACCGGCCACCACCACCTCTGGAACACTCCGATACCTTATCTCTTCGGCGGAATAGCCCTAACTCTGCTTCTCATCCTCACCGCATTGATTTTCCTCGTTTGCTCTTACCGGAAACGCTCTTCTTCCGACGAAGACCACCAGAAGACGAAGATCGAAACGCCAGCGAAAACGCCCGACGATCTGCAACCTAAAATCGTCGTCATAATGGCCGGAAATCACACGCCGACGTTCCTCGCTACCGCTACTACGCCTTCCGTTTCTTCTTAA

Protein sequence

MRGMRSLAATATATAMKTGHHHLWNTPIPYLFGGIALTLLLILTALIFLVCSYRKRSSSDEDHQKTKIETPAKTPDDLQPKIVVIMAGNHTPTFLATATTPSVSS

Homology

[Close]

BLAST of Lag0030177 vs. NCBI nr
Match: KAG6602552.1 (Protein GLUTAMINE DUMPER 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033232.1 Protein GLUTAMINE DUMPER 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.1 bits (388), Expect = 6.8e-34
Identity = 84/106 (79.25%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 1   MRGMRSLAATATATAMKTGHHHLWNTPIPYLFGGIALTLLLILTALIFLVCSYRKR-SSS 60
           MRGMRSLAA+A+A+AMKTGH+H WNT +PYLFG I LTLLLILTALIFLVCS RK  SSS
Sbjct: 1   MRGMRSLAASASASAMKTGHYHFWNTSVPYLFGAITLTLLLILTALIFLVCSCRKHSSSS 60

Query: 61  DEDHQKTKIETPAKTPDDLQPKIVVIMAGNHTPTFLATATTPSVSS 106
           DE+ QKTKI+TP+   DD QPKIVVIMAGNHTPTFLATA TPS SS
Sbjct: 61  DEEDQKTKIDTPSVAADDPQPKIVVIMAGNHTPTFLATA-TPSDSS 105

[Close]

BLAST of Lag0030177 vs. NCBI nr
Match: XP_023545008.1 (protein GLUTAMINE DUMPER 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.5 bits (371), Expect = 6.4e-32
Identity = 83/106 (78.30%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 1   MRGMRSLAATATATAMKTGHHHLWNTPIPYLFGGIALTLLLILTALIFLVCSYRKR-SSS 60
           MRGMRSLA  A+A+AMKTGH+H WNT +PYLFG I LTLLLILTALIFLVCS RK  SSS
Sbjct: 1   MRGMRSLA--ASASAMKTGHYHFWNTSVPYLFGAITLTLLLILTALIFLVCSCRKHSSSS 60

Query: 61  DEDHQKTKIETPAKTPDDLQPKIVVIMAGNHTPTFLATATTPSVSS 106
           DE+ QKTKI+TP+   DD QPKIVVIMAGNHTPTFLATA TPS SS
Sbjct: 61  DEEDQKTKIDTPSVAADDPQPKIVVIMAGNHTPTFLATA-TPSDSS 103

[Close]

BLAST of Lag0030177 vs. NCBI nr
Match: KAG6578523.1 (Protein GLUTAMINE DUMPER 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016084.1 Protein GLUTAMINE DUMPER 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146.4 bits (368), Expect = 1.4e-31
Identity = 81/109 (74.31%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 4   MRSLAATATATAMKTGHHHLWNTPIPYLFGGIALTLLLILTALIFLVCSYRKR------- 63
           MRSLAA AT  AM+TG HHLWNTPIPYLFGGI LTLLLILT+LI L CS RK        
Sbjct: 1   MRSLAAAATPAAMETGRHHLWNTPIPYLFGGIGLTLLLILTSLILLTCSCRKHSSSSPSS 60

Query: 64  SSSDEDHQKTKIETPAKTPDDLQPKIVVIMAGNHTPTFLATATTPSVSS 106
           SSS+E+HQKTKI+TPAKT  DLQP+IVVIMAGN+TP+FLATA TPS SS
Sbjct: 61  SSSEEEHQKTKIDTPAKTAADLQPQIVVIMAGNNTPSFLATA-TPSDSS 108

[Close]

BLAST of Lag0030177 vs. NCBI nr
Match: KAA0039409.1 (protein GLUTAMINE DUMPER 6-like [Cucumis melo var. makuwa] >TYK00596.1 protein GLUTAMINE DUMPER 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 1.5e-17
Identity = 59/90 (65.56%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 20  HHH--LWNTPIPYLFGGIALTLLLILTALIFLVCSYRKRSSS-------DEDHQK-TKIE 79
           HHH  LWNTPIPYLFGGIALTLLLILT+LI   CSYRKR +S       +E H K  KI+
Sbjct: 9   HHHYRLWNTPIPYLFGGIALTLLLILTSLILFACSYRKRPTSSSSFSYDEEQHPKIMKID 68

Query: 80  TPAKTPDDLQPKIVVIMAGNHTPTFLATAT 100
           TP+ T        VVIMAGNHTPTFLATAT
Sbjct: 69  TPSPT-----TPAVVIMAGNHTPTFLATAT 93

[Close]

BLAST of Lag0030177 vs. NCBI nr
Match: XP_010034416.1 (protein GLUTAMINE DUMPER 6 [Eucalyptus grandis] >KCW51999.1 hypothetical protein EUGRSUZ_J01438 [Eucalyptus grandis])

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-14
Identity = 44/80 (55.00%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 22  HLWNTPIPYLFGGIALTLLLILTALIFLVCSYRKRSSSDEDHQKTKIETPAKTPDDLQPK 81
           H+W++PIPYLFGG+ALTL+LI TALI LVCSY+K +S +      K+      P D +PK
Sbjct: 11  HIWSSPIPYLFGGLALTLILIFTALIILVCSYQKHTSGELREADEKLPKAVIIPLDAEPK 70

Query: 82  IVVIMAGNHTPTFLATATTP 102
           IVVIMAG+  PT++A   TP
Sbjct: 71  IVVIMAGDDMPTYIAKPVTP 90

[Close]

BLAST of Lag0030177 vs. ExPASy Swiss-Prot
Match: Q3E965 (Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana OX=3702 GN=GDU5 PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-10
Identity = 36/80 (45.00%), Postives = 45/80 (56.25%), Query Frame = 0


Query: 24  WNTPIPYLFGGIALTLLLILTALIFLVCSYRKRSSSDEDHQKTKIETPAKTPDDLQPKIV 83
           W TP+PYLFGG+A  L LI  AL+ L CSY + S   ED +K             + KI+
Sbjct: 28  WRTPVPYLFGGLAAMLGLIAFALLLLACSYWRLSRQTEDEEKQTESGEKVVAKAFEEKIL 87

Query: 84  VIMAGNHTPTFLATATTPSV 104
           VIMAG + PTFLAT     +
Sbjct: 88  VIMAGQNNPTFLATPVAAKI 107

[Close]

BLAST of Lag0030177 vs. ExPASy Swiss-Prot
Match: Q9SW07 (Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana OX=3702 GN=GDU2 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 9.3e-10
Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 21  HHLWNTPIPYLFGGIALTLLLILTALIFLVCSYRKRSSSDE------DHQKTKIETPAKT 80
           H  W++P+PYLFGG+A  L LI  AL+ L CSY + S S E      D  K   +T    
Sbjct: 25  HSPWHSPVPYLFGGLAAMLALICVALLILACSYWRLSGSAERDLEAGDDAKPDNDTNKTK 84

Query: 81  PDDLQPKIVVIMAGNHTPTFLATATTPSVSS 106
             ++  K +VIMAG+  PT+LAT  T S  S
Sbjct: 85  HTEMPEKFLVIMAGDVRPTYLATPATRSEQS 115

[Close]

BLAST of Lag0030177 vs. ExPASy Swiss-Prot
Match: O81775 (Protein GLUTAMINE DUMPER 1 OS=Arabidopsis thaliana OX=3702 GN=GDU1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-09
Identity = 40/96 (41.67%), Postives = 54/96 (56.25%), Query Frame = 0


Query: 13  ATAMKTGHHHL-----WNTPIPYLFGGIALTLLLILTALIFLVCSY-RKRSSSDEDHQKT 72
           AT+    HH +     W++P+PYLFGG+A  L LI  AL+ L CSY R  SS +ED Q  
Sbjct: 14  ATSTSVNHHGVTPQSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSSSGEEDGQNV 73

Query: 73  KIETPAKTPDD-----LQPKIVVIMAGNHTPTFLAT 98
             E  +++ D       + K +VIMAG   P +LAT
Sbjct: 74  DEEKESRSGDKAANGAYEEKFLVIMAGEDLPRYLAT 109

[Close]

BLAST of Lag0030177 vs. ExPASy Swiss-Prot
Match: Q9FHH5 (Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana OX=3702 GN=GDU3 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.1e-09
Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 14  TAMKTGHHHLWNTPIPYLFGGIALTLLLILTALIFLVCSYRKRSS--SDEDHQK------ 73
           T M  G H  W++P+PYLFGG+A  L LI  AL+ L CSY + S     E++Q       
Sbjct: 18  TTMGGGPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSGYLDGEENQSRERDLE 77

Query: 74  ---TKIETPAKTPDDLQPKIVVIMAGNHTPTFLATATTPSVSS 106
               K +  A  P  L  K +VIMAGN  PT+LA   TPSV +
Sbjct: 78  VGDVKPDKTAVKPVALPEKFLVIMAGNVKPTYLA---TPSVKT 117

[Close]

BLAST of Lag0030177 vs. ExPASy Swiss-Prot
Match: Q3EAV6 (Protein GLUTAMINE DUMPER 6 OS=Arabidopsis thaliana OX=3702 GN=GDU6 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 6.0e-09
Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 23 LWNTPIPYLFGGIALTLLLILTALIFLVCSYRK-RSSSDEDHQKTKIETPAKTPDDLQ-- 82
          +W +P+PYLFGG+ L +LLI  AL+ LVC+++K  SSS+ +H   + +   K    +   
Sbjct: 9  IWKSPVPYLFGGLFLLVLLIALALLSLVCTHQKPSSSSNNNHMDEEDDVGDKDAKPITRE 68

Query: 83 --PKIVVIMAGNHTPTFLA 97
            PKIVVI+AG++ PT LA
Sbjct: 69 YLPKIVVILAGDNKPTCLA 87

The following BLAST results are available for this feature:

BLAST of Lag0030177 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602552.1	6.8e-34	79.25	Protein GLUTAMINE DUMPER 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_023545008.1	6.4e-32	78.30	protein GLUTAMINE DUMPER 6-like [Cucurbita pepo subsp. pepo]	[more]
KAG6578523.1	1.4e-31	74.31	Protein GLUTAMINE DUMPER 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
KAA0039409.1	1.5e-17	65.56	protein GLUTAMINE DUMPER 6-like [Cucumis melo var. makuwa] >TYK00596.1 protein G...	[more]
XP_010034416.1	2.1e-14	55.00	protein GLUTAMINE DUMPER 6 [Eucalyptus grandis] >KCW51999.1 hypothetical protein...	[more]

BLAST of Lag0030177 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E965	1.4e-10	45.00	Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana OX=3702 GN=GDU5 PE=2 SV=2	[more]
Q9SW07	9.3e-10	42.86	Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana OX=3702 GN=GDU2 PE=2 SV=1	[more]
O81775	1.6e-09	41.67	Protein GLUTAMINE DUMPER 1 OS=Arabidopsis thaliana OX=3702 GN=GDU1 PE=1 SV=1	[more]
Q9FHH5	2.1e-09	42.72	Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana OX=3702 GN=GDU3 PE=1 SV=1	[more]
Q3EAV6	6.0e-09	44.30	Protein GLUTAMINE DUMPER 6 OS=Arabidopsis thaliana OX=3702 GN=GDU6 PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..74
None	No IPR available	PANTHER	PTHR33228:SF25	PROTEIN GLUTAMINE DUMPER 7	coord: 8..100
IPR040359	Protein glutamine dumper	PANTHER	PTHR33228	PROTEIN GLUTAMINE DUMPER 4-RELATED	coord: 8..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0030177.1	Lag0030177.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080143	regulation of amino acid export
cellular_component	GO:0016020	membrane