Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGTCGGCGAACGGAAGAAAGCTGCTGTTTTCGTGAAGAAGAGGTGGAGAAAAACGCTGAGTTCGTGGGTGGGTGGTGAAGTGTGAAACGAAAAGAGGAAAAGGCAATAATGGGAATTGGGAAAATTAAAAAACCCTAAGTGGAGCTGGAGCAAAACCCAGGTTTTTGTTTCCTATTTCTTTTTTTTTTTTAATTAAACAGCCCACCAGAAATTGGGCTTCAATTTCAGCCCACTTCAACTTAAAAATTCTGAAGCAGTCGTGTCCTGGGCGTGTCCTAGCCGTATCCAGCTGTGTAGGACACGCAAAATTGCGTGACGGACACGTGTCCGGAGCGTGTCAGGACGAATCCGTGTCTGACACAGATCCTCCCCCCATTTTGGCGTGTCCGTGCTTCATAGGCCAGGACCAATAATGTTCCATGGGAGGATCCTCATCAGAAATGATTACCACCCCAATTCAACTAAAATATATTCCCTATCATAATTAATAGTAGACACCAATTCCATCAAATTCCTAACCCCCTCTCTCTTATATCCTTGAGCATTGTGCTTTTAACACCAATTTACCAACATTTATTACCATGAAGTCATTCGATATGGAGATGCAAAGTGCAAAGTCATTTGCCAAATTGAAGAAGTGCTACTTAATTGCATGGTAATGCAAGGAGTGGCAATAGGTTTAGGGATGAATTGAAAAATTAAATCATTAGAAGCAAAGAAGTGATCTTCAATGAAAAGGTTTGGCATAAGGATAGAAGTAGAACTATCTTTCCTTGTTTAAGCTCCCGATCAAGGTTGCCAAAATTTTGGAGAAGCTTATTAGAGATTTTTTCTGGGAAGGATCTCGAGGAAATGGTGGTATGCATAACATTAATTGGGAGACAACTCAGCTCCCTATTCTTTTGGGTGGTTTGAATATTGGCCATTTTAGAATTCGAAATATGGCTCTTATGGCTAAATGGATTTGGAGATTCTTACATGAACGGGATTCTCTTTGGTATAATATCATTGTCGGTAAATACTATTATGCTAATGATAATTTTAACTAGCCACACAAAATTTTGAGAGGTCCTTACAAATCGCCGTGGCGTCATATTTGTTCTACAATTGATCTTATTGAAAATAGGATTCAGAGAGTTCTTGGAAATGGTCATAATATTTATTTCTGGCATGACTGTTGGCTACCATGTGGAATTATTGCAGAAGCATATCCAAGACTATTTCGATTAACTACCAGATCTACTGCTATGGTGGACCAAGTCTGGAATAGTTCCAATGCGGCTTGGGATTTGGGACTTAGACGTAATCTAAATGATTTGGAGGTAATTGAATGGACTAGTCTCTCTCATATTCTTTTATCTGTTACGATTCGATCAGTGAATGACTCATGGTGTCGGCCTCTTGATCATTCTAAGAGTTTTTCTGTCAAATCTCTTATGTCTGATATGCTTACTGATTGTGATTCCACACCATCCAATTTTTACTTGGAGCTTTGGAAAGATGTCTATCCTAAGAAAATCAAAATTTTTCTATGGGAGCTTAGCCATGGAGGTATTAATACGGCAGATCGATTGCAAAGGAGAATGCCTCATCTGACTCTCTCTCCATCTTGTTGTGTGATGTGTTATTCTGCCCCAGAAAATCCTTGTCATCTTTTTGTTCACTGCCTTTATGCCTCTAAATATTGGTTAATCATGAAGAATGCCTTTGGTTGGTCCTTGATCTTGCCCAACAATATTTATGGAATTCTCGACTATGTGTTTACAGGACACCCATTTCATGGTGTGAAAAAAATCTTATGTTTATCTATTAACAGAGTATTCTTCTGGTACCTTTGGTGTGAGCGAAATGGTCGACTTTTCAGGGACGTCTCCTCAACTTTTGACTCTTTTTGGGATTTAATTATCTTTCATGCTATGTATTGGTGTAAAAATAAACACCCTTTTAATGCATACAGTCTCTCTACTTTGATTACTAGTGGAGATCTTTATTGTAATTGTCTTTAGACGTTGGGTGTTTTTTTAGCATCCTTTATTTCATCTATCAATGAAATGAATTGTTTCTCTTCTAAAAAAAAAAGGATAGAAGTAGAACAAGTGATATGTATTCAACTCAGATCAAGTTGAATACATATCACTTGTTCTACTTTTATTAGTTTATTAGCCCGACTATTGGTCTCATTGGCAATCGCATCCAAAAAGAAATGACCTTCACACTTCTTTTTGGCATGAAGCTTGGCCGAATAGTGAAGTTCTTGCTACTGTTTTCCCAAGGTCATCGTTTGTCTACCAGGCCTGAATCTGATGTTACTGACTTACTGTTGCCCATGTTTGGAATTCAGATCAAAAAGCATGGGATTTGAATCTCCAGAGGAATCTTAATGAGTTTGAAATTGTAGAATGGGCTAACCCATCAAATCTTCTATCTTCGGTTACTTTGAGGAATACAAATGACTCTCGGTACTAG
mRNA sequence
ATGGGTGGTCGGCGAACGGAAGAAAGCTGCTGTTTTCGTGAAGAAGAGGTGGAGAAAAACGCTGAGTTCCTCCCGATCAAGGTTGCCAAAATTTTGGAGAAGCTTATTAGAGATTTTTTCTGGGAAGGATCTCGAGGAAATGGTGGTATGCATAACATTAATTGGGAGACAACTCAGCTCCCTATTCTTTTGGGTGGTTTGAATATTGGCCATTTTAGAATTCGAAATATGGCTCTTATGGCTAAATGGATTTGGAGATTCTTACATGAACGGGATTCTCTTTGGTATAATATCATTGTCGAAGCATATCCAAGACTATTTCGATTAACTACCAGATCTACTGCTATGGTGGACCAAGTCTGGAATAGTTCCAATGCGGCTTGGGATTTGGGACTTAGACGTAATCTAAATGATTTGGAGGTAATTGAATGGACTAGTCTCTCTCATATTCTTTTATCTGTTACGATTCGATCAGTGAATGACTCATGGTGTCGGCCTCTTGATCATTCTAAGAGTTTTTCTGTCAAATCTCTTATGTCTGATATGCTTACTGATTGTGATTCCACACCATCCAATTTTTACTTGGAGCTTTGGAAAGATGTCTATCCTAAGAAAATCAAAATTTTTCTATGGGAGCTTAGCCATGGAGGTATTAATACGGCAGATCGATTGCAAAGGAGAATGCCTCATCTGACTCTCTCTCCATCTTGTTGTGTGATGTGTTATTCTGCCCCAGAAAATCCTTGTCATCTTTTTGTTCACTGCCTTTATGCCTCTAAATATTGGTTAATCATGAAGAATGCCTTTGGTTGGTCCTTGATCTTGCCCAACAATATTTATGGAATTCTCGACTATGTGTTTACAGGACACCCATTTCATGATCAAAAAGCATGGGATTTGAATCTCCAGAGGAATCTTAATGAGTTTGAAATTGTAGAATGGGCTAACCCATCAAATCTTCTATCTTCGGTTACTTTGAGGAATACAAATGACTCTCGGTACTAG
Coding sequence (CDS)
ATGGGTGGTCGGCGAACGGAAGAAAGCTGCTGTTTTCGTGAAGAAGAGGTGGAGAAAAACGCTGAGTTCCTCCCGATCAAGGTTGCCAAAATTTTGGAGAAGCTTATTAGAGATTTTTTCTGGGAAGGATCTCGAGGAAATGGTGGTATGCATAACATTAATTGGGAGACAACTCAGCTCCCTATTCTTTTGGGTGGTTTGAATATTGGCCATTTTAGAATTCGAAATATGGCTCTTATGGCTAAATGGATTTGGAGATTCTTACATGAACGGGATTCTCTTTGGTATAATATCATTGTCGAAGCATATCCAAGACTATTTCGATTAACTACCAGATCTACTGCTATGGTGGACCAAGTCTGGAATAGTTCCAATGCGGCTTGGGATTTGGGACTTAGACGTAATCTAAATGATTTGGAGGTAATTGAATGGACTAGTCTCTCTCATATTCTTTTATCTGTTACGATTCGATCAGTGAATGACTCATGGTGTCGGCCTCTTGATCATTCTAAGAGTTTTTCTGTCAAATCTCTTATGTCTGATATGCTTACTGATTGTGATTCCACACCATCCAATTTTTACTTGGAGCTTTGGAAAGATGTCTATCCTAAGAAAATCAAAATTTTTCTATGGGAGCTTAGCCATGGAGGTATTAATACGGCAGATCGATTGCAAAGGAGAATGCCTCATCTGACTCTCTCTCCATCTTGTTGTGTGATGTGTTATTCTGCCCCAGAAAATCCTTGTCATCTTTTTGTTCACTGCCTTTATGCCTCTAAATATTGGTTAATCATGAAGAATGCCTTTGGTTGGTCCTTGATCTTGCCCAACAATATTTATGGAATTCTCGACTATGTGTTTACAGGACACCCATTTCATGATCAAAAAGCATGGGATTTGAATCTCCAGAGGAATCTTAATGAGTTTGAAATTGTAGAATGGGCTAACCCATCAAATCTTCTATCTTCGGTTACTTTGAGGAATACAAATGACTCTCGGTACTAG
Protein sequence
MGGRRTEESCCFREEEVEKNAEFLPIKVAKILEKLIRDFFWEGSRGNGGMHNINWETTQLPILLGGLNIGHFRIRNMALMAKWIWRFLHERDSLWYNIIVEAYPRLFRLTTRSTAMVDQVWNSSNAAWDLGLRRNLNDLEVIEWTSLSHILLSVTIRSVNDSWCRPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKDVYPKKIKIFLWELSHGGINTADRLQRRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGILDYVFTGHPFHDQKAWDLNLQRNLNEFEIVEWANPSNLLSSVTLRNTNDSRY
Homology
BLAST of Lag0029489 vs. NCBI nr
Match:
RVW29080.1 (putative ribonuclease H protein [Vitis vinifera])
HSP 1 Score: 158.3 bits (399), Expect = 1.2e-34
Identity = 101/324 (31.17%), Postives = 145/324 (44.75%), Query Frame = 0
Query: 1 MGGRRT-EESCCFREEEVEKNAEFLPIKVAKILEKLIRDFFWEGSRGNGGMHNINWETTQ 60
+GGR T +SC + +P+ +A +EK+ RDF W G+ H I WE
Sbjct: 224 LGGRITLIQSCLSHIPSYFLSLFKIPVSIASKIEKMQRDFLWSGAGEGKRDHLIRWEVVS 283
Query: 61 LPILLGGLNIGHFRIRNMALMAKWIWRFLHERDSLWYNIIVEAY---------------- 120
P +GGL G +RN AL+ KW+WRFL ER LW+ +I Y
Sbjct: 284 RPREMGGLGFGKTSMRNSALLGKWLWRFLRERSDLWHKVIASIYGTHPNGWDANMVVRWS 343
Query: 121 --------------PRLFRLTTRSTAMVDQVWNSSNAAWDLGLRRNLNDLEVIEWTSLSH 180
L ++ ++ + + + NS +W+ RRNL D E+ L
Sbjct: 344 HRCPWKAIAQVFKSSPLLVISVKNLTVSNVLGNSLPLSWNFNFRRNLTDSEIDLLQRLMS 403
Query: 181 ILLSVTIR-SVNDSWCRPLDHSKSFSVKSLMSDMLTDCDS---TPSNFYLELWKDVYPKK 240
L SV + S +DS L S SFSVKS + D + P+ F LW P K
Sbjct: 404 SLHSVLLSPSSSDSRAWSLSSSGSFSVKSFFYALSKDSNPLMFLPAKF---LWSSKVPSK 463
Query: 241 IKIFLWELSHGGINTADRLQRRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYWLIM 290
+K W ++HG +NT D+LQ R P+ L P C++C E+ HLF+HC W +
Sbjct: 464 VKALAWLVAHGKVNTNDKLQLRRPYKALCPQWCILCKGNGESINHLFLHCPVTIGLWHRL 523
BLAST of Lag0029489 vs. NCBI nr
Match:
VVA25489.1 (Hypothetical predicted protein, partial [Prunus dulcis])
HSP 1 Score: 156.8 bits (395), Expect = 3.4e-34
Identity = 104/363 (28.65%), Postives = 153/363 (42.15%), Query Frame = 0
Query: 24 LPIKVAKILEKLIRDFFWEGSRGNGGMHNINWETTQLPILLGGLNIGHFRIRNMALMAKW 83
+PI VA +EKL+RDF WEG G H ++WE GGL +G R R++AL AKW
Sbjct: 626 IPIGVANRIEKLMRDFLWEGLDGKSN-HAVSWEVVGKAKFCGGLGVGSLRARSVALRAKW 685
Query: 84 IWRFLHERDSLWYNII-------------------------------------------- 143
+WRF +E +LW+ +I
Sbjct: 686 LWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRCPWRDISSGYNLFLQGCVFVVG 745
Query: 144 ------------------VEAYPRLFRLTTRSTAMVDQVWNSSN--AAWDLGLRRNLNDL 203
E +PRLF L+ + + +S +WD G RRNLN+L
Sbjct: 746 SGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNISSFASSDGLLLSWDFGFRRNLNEL 805
Query: 204 EVIEWTSLSHILLSVTI-RSVNDSWCRPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELW 263
E+ E L +L V + S D D S F+ SL S + + Y ++W
Sbjct: 806 EITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFTCHSLCSHIQNCGEGETFPPYTQIW 865
Query: 264 KDVYPKKIKIFLWELSHGGINTADRLQRRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYA 311
K P K+KIF+W+ G +NT D LQRR P+L +SP C +C A ++ HL +HC ++
Sbjct: 866 KAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMAGDSVNHLLLHCPFS 925
BLAST of Lag0029489 vs. NCBI nr
Match:
VVA39726.1 (Hypothetical predicted protein, partial [Prunus dulcis])
HSP 1 Score: 155.2 bits (391), Expect = 9.8e-34
Identity = 104/363 (28.65%), Postives = 152/363 (41.87%), Query Frame = 0
Query: 24 LPIKVAKILEKLIRDFFWEGSRGNGGMHNINWETTQLPILLGGLNIGHFRIRNMALMAKW 83
+PI VA +EKL+RDF WEG G H ++WE GGL +G R R+ L AKW
Sbjct: 626 IPIGVANRIEKLMRDFLWEGLDGKRN-HAVSWEVVGKAKFCGGLGVGSLRARSAVLRAKW 685
Query: 84 IWRFLHERDSLWYNII-------------------------------------------- 143
+WRF +E +LW+ +I
Sbjct: 686 LWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLRGCVFVVG 745
Query: 144 ------------------VEAYPRLFRLTTRSTAMVDQVWNSSN--AAWDLGLRRNLNDL 203
E +PRLF L+ + + +S +WD G RRNLN+L
Sbjct: 746 CGVRVRFWEDDWSQGGVLKEVFPRLFNLSRKQNHNISSFTSSDGLPLSWDFGFRRNLNEL 805
Query: 204 EVIEWTSLSHILLSVTI-RSVNDSWCRPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELW 263
E+ E L +L V + S D LD S F+ SL S + + Y ++W
Sbjct: 806 EITEVARLLDLLEGVRLFTSRLDKRIWKLDPSGLFTCHSLCSHIQNCGEGEIFPPYTQIW 865
Query: 264 KDVYPKKIKIFLWELSHGGINTADRLQRRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYA 311
K P K+KIF+W+ G +NT D LQRR P+L +SP C +C A ++ HL +HC ++
Sbjct: 866 KAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGDSVDHLLLHCPFS 925
BLAST of Lag0029489 vs. NCBI nr
Match:
BBN69746.1 (VIRB2-interacting protein 2 [Prunus dulcis])
HSP 1 Score: 154.5 bits (389), Expect = 1.7e-33
Identity = 103/363 (28.37%), Postives = 152/363 (41.87%), Query Frame = 0
Query: 24 LPIKVAKILEKLIRDFFWEGSRGNGGMHNINWETTQLPILLGGLNIGHFRIRNMALMAKW 83
+PI VA +EKL+RDF WEG G H ++WE GGL +G R R++AL AKW
Sbjct: 569 IPIGVANRIEKLMRDFLWEGLDGKSN-HAVSWEVVGKAKFCGGLGVGSLRARSVALRAKW 628
Query: 84 IWRFLHERDSLWYNII-------------------------------------------- 143
+WRF +E +LW+ +I
Sbjct: 629 LWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRCPWRDISSGYNLFLQGCVFVVG 688
Query: 144 ------------------VEAYPRLFRLTTRSTAMVDQVWNSSN--AAWDLGLRRNLNDL 203
E +PRLF L+ + + +S +WD G RRNLN+L
Sbjct: 689 SGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNISSFASSDGLLLSWDFGFRRNLNEL 748
Query: 204 EVIEWTSLSHILLSVTI-RSVNDSWCRPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELW 263
E+ E L +L V + S D D S F+ S S + + Y ++W
Sbjct: 749 EITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFTCHSFCSHIQNCGEGEIFPPYTQIW 808
Query: 264 KDVYPKKIKIFLWELSHGGINTADRLQRRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYA 311
K P K+KIF+W+ G +NT D LQRR P+L +SP C +C A ++ HL +HC ++
Sbjct: 809 KAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMAGDSVNHLLLHCPFS 868
BLAST of Lag0029489 vs. NCBI nr
Match:
BBN67784.1 (VIRB2-interacting protein 2 [Prunus dulcis])
HSP 1 Score: 154.5 bits (389), Expect = 1.7e-33
Identity = 103/363 (28.37%), Postives = 152/363 (41.87%), Query Frame = 0
Query: 24 LPIKVAKILEKLIRDFFWEGSRGNGGMHNINWETTQLPILLGGLNIGHFRIRNMALMAKW 83
+PI VA +EKL+RDF WEG G H ++WE GGL +G R R++AL AKW
Sbjct: 1276 IPIGVANRIEKLMRDFLWEGLDGKSN-HAVSWEVVGKAKFCGGLGVGSLRARSVALRAKW 1335
Query: 84 IWRFLHERDSLWYNII-------------------------------------------- 143
+WRF +E +LW+ +I
Sbjct: 1336 LWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRCPWRDISSGYNLFLQGCVFVVG 1395
Query: 144 ------------------VEAYPRLFRLTTRSTAMVDQVWNSSN--AAWDLGLRRNLNDL 203
E +PRLF L+ + + +S +WD G RRNLN+L
Sbjct: 1396 SGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNISSFASSDGLLLSWDFGFRRNLNEL 1455
Query: 204 EVIEWTSLSHILLSVTI-RSVNDSWCRPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELW 263
E+ E L +L V + S D D S F+ S S + + Y ++W
Sbjct: 1456 EITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFTCHSFCSHIQNCGEGEIFPPYTQIW 1515
Query: 264 KDVYPKKIKIFLWELSHGGINTADRLQRRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYA 311
K P K+KIF+W+ G +NT D LQRR P+L +SP C +C A ++ HL +HC ++
Sbjct: 1516 KAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMAGDSVNHLLLHCPFS 1575
BLAST of Lag0029489 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 3.3e-08
Identity = 62/302 (20.53%), Postives = 109/302 (36.09%), Query Frame = 0
Query: 24 LPIKVAKILEKLIRDFFWEGSRGNGGMHNINWETTQLPILLGGLNIGHFRIRNMALMAKW 83
LP + L++L R F W + H + W P GGL + + N AL++K
Sbjct: 58 LPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKV 117
Query: 84 IWRFLHERDSLWYNIIVEAYPRLFRLTTRSTAMVDQVWNSSNAAWDLGLRRNL------- 143
WR L E++SLW ++ + Y + + + W+S+ + +GLR +
Sbjct: 118 GWRLLQEKNSLWTLVLQKKY-HVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWI 177
Query: 144 --NDLEVIEWT------------------------------------------------- 203
+ ++ WT
Sbjct: 178 PGDGQQIRFWTDRWVSGKPLLELDNGERPTDCDTVVAKDLWIPGRGWDFAKIDPYTTNNT 237
Query: 204 --SLSHILLSVTIRSVNDSWCRPLDHSKSFSVKSLMSDMLTDCDSTP--SNFYLELWKDV 263
L ++L + + D FSV+S + D P ++F+ LWK
Sbjct: 238 RLELRAVVLDL-VTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVR 297
BLAST of Lag0029489 vs. ExPASy TrEMBL
Match:
A0A438D0T1 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_370 PE=4 SV=1)
HSP 1 Score: 158.3 bits (399), Expect = 5.6e-35
Identity = 101/324 (31.17%), Postives = 145/324 (44.75%), Query Frame = 0
Query: 1 MGGRRT-EESCCFREEEVEKNAEFLPIKVAKILEKLIRDFFWEGSRGNGGMHNINWETTQ 60
+GGR T +SC + +P+ +A +EK+ RDF W G+ H I WE
Sbjct: 224 LGGRITLIQSCLSHIPSYFLSLFKIPVSIASKIEKMQRDFLWSGAGEGKRDHLIRWEVVS 283
Query: 61 LPILLGGLNIGHFRIRNMALMAKWIWRFLHERDSLWYNIIVEAY---------------- 120
P +GGL G +RN AL+ KW+WRFL ER LW+ +I Y
Sbjct: 284 RPREMGGLGFGKTSMRNSALLGKWLWRFLRERSDLWHKVIASIYGTHPNGWDANMVVRWS 343
Query: 121 --------------PRLFRLTTRSTAMVDQVWNSSNAAWDLGLRRNLNDLEVIEWTSLSH 180
L ++ ++ + + + NS +W+ RRNL D E+ L
Sbjct: 344 HRCPWKAIAQVFKSSPLLVISVKNLTVSNVLGNSLPLSWNFNFRRNLTDSEIDLLQRLMS 403
Query: 181 ILLSVTIR-SVNDSWCRPLDHSKSFSVKSLMSDMLTDCDS---TPSNFYLELWKDVYPKK 240
L SV + S +DS L S SFSVKS + D + P+ F LW P K
Sbjct: 404 SLHSVLLSPSSSDSRAWSLSSSGSFSVKSFFYALSKDSNPLMFLPAKF---LWSSKVPSK 463
Query: 241 IKIFLWELSHGGINTADRLQRRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYWLIM 290
+K W ++HG +NT D+LQ R P+ L P C++C E+ HLF+HC W +
Sbjct: 464 VKALAWLVAHGKVNTNDKLQLRRPYKALCPQWCILCKGNGESINHLFLHCPVTIGLWHRL 523
BLAST of Lag0029489 vs. ExPASy TrEMBL
Match:
A0A5E4FED8 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035166 PE=4 SV=1)
HSP 1 Score: 156.8 bits (395), Expect = 1.6e-34
Identity = 104/363 (28.65%), Postives = 153/363 (42.15%), Query Frame = 0
Query: 24 LPIKVAKILEKLIRDFFWEGSRGNGGMHNINWETTQLPILLGGLNIGHFRIRNMALMAKW 83
+PI VA +EKL+RDF WEG G H ++WE GGL +G R R++AL AKW
Sbjct: 626 IPIGVANRIEKLMRDFLWEGLDGKSN-HAVSWEVVGKAKFCGGLGVGSLRARSVALRAKW 685
Query: 84 IWRFLHERDSLWYNII-------------------------------------------- 143
+WRF +E +LW+ +I
Sbjct: 686 LWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRCPWRDISSGYNLFLQGCVFVVG 745
Query: 144 ------------------VEAYPRLFRLTTRSTAMVDQVWNSSN--AAWDLGLRRNLNDL 203
E +PRLF L+ + + +S +WD G RRNLN+L
Sbjct: 746 SGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNISSFASSDGLLLSWDFGFRRNLNEL 805
Query: 204 EVIEWTSLSHILLSVTI-RSVNDSWCRPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELW 263
E+ E L +L V + S D D S F+ SL S + + Y ++W
Sbjct: 806 EITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFTCHSLCSHIQNCGEGETFPPYTQIW 865
Query: 264 KDVYPKKIKIFLWELSHGGINTADRLQRRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYA 311
K P K+KIF+W+ G +NT D LQRR P+L +SP C +C A ++ HL +HC ++
Sbjct: 866 KAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMAGDSVNHLLLHCPFS 925
BLAST of Lag0029489 vs. ExPASy TrEMBL
Match:
A0A2N9EGZ3 (Molybdenum cofactor biosynthesis protein C OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1924 PE=3 SV=1)
HSP 1 Score: 156.8 bits (395), Expect = 1.6e-34
Identity = 99/307 (32.25%), Postives = 148/307 (48.21%), Query Frame = 0
Query: 24 LPIKVAKILEKLIRDFFWEGSRGNGGMHNINWETTQLPILLGGLNIGHFRIRNMALMAKW 83
LP +VA L+KL RDF W G H +NW PI GGL + + R N +L+ KW
Sbjct: 437 LPFEVANRLKKLQRDFLWNGMGDQPKFHLVNWAKVCEPIQNGGLGVKYLRFFNQSLLGKW 496
Query: 84 IWRFLHERDSLWYNIIVEAYPRLFRLTTRSTAMVDQVWN--SSNAAWDLGLRRNLNDLEV 143
+WR+ +R++LW ++ A+P LF + A V + + + N W++ RNL D E+
Sbjct: 497 LWRYGMDREALWRKVVEGAFPDLFSIAADREATVADLLSIRNGNLYWEVTFVRNLQDWEI 556
Query: 144 IEWTSLSHILLSVTIR-SVNDSWCRPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKD 203
+ TS +L SV + S D C SKSFSV S + + + + E+WK
Sbjct: 557 VALTSCLDLLYSVALHDSGLDQLCWKRHSSKSFSVSSYYRCL--NAHTIKQFPWKEVWKT 616
Query: 204 VYPKKIKIFLWELSHGGINTADRLQRRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASK 263
P ++ F+W G I T D L++R + L CC MC +A E+ HLF+HC A +
Sbjct: 617 KAPPRVAFFVWTAVLGKILTNDNLRKR--RVVLVDWCC-MCKAAGESSDHLFLHCSMAKQ 676
Query: 264 YWLIMKNAFGWSLILPNNIYGILDY--VFTGHPFHDQ--------KAWDLNLQRNLNEFE 318
W + FG ++P + ++ GH H + W L +RNL FE
Sbjct: 677 LWDTILLLFGAPWVMPRTVQDLITCWPGALGHRRHAEIWRVFPHCLMWCLWRERNLRTFE 736
BLAST of Lag0029489 vs. ExPASy TrEMBL
Match:
M5XUF8 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015473mg PE=4 SV=1)
HSP 1 Score: 155.6 bits (392), Expect = 3.6e-34
Identity = 103/350 (29.43%), Postives = 152/350 (43.43%), Query Frame = 0
Query: 24 LPIKVAKILEKLIRDFFWEGSRGNGGMHNINWETTQLPILLGGLNIGHFRIRNMALMAKW 83
+PI VA +EKL+RDF WEG H ++WE GGL +G R R+ AL AKW
Sbjct: 1067 IPIGVANRIEKLMRDFLWEGLDRKRN-HAVSWEVVGKAKFCGGLGVGSLRARSAALRAKW 1126
Query: 84 IWRFLHERDSLWYNII-------------------------------------------- 143
+WRF +E +LW+ +I
Sbjct: 1127 LWRFPNEPHALWHKVIRSIYGLDTNGPWRDISSGYNLFLQGCVFVVGCGVRVRFWEDDWN 1186
Query: 144 -----VEAYPRLFRLTTRSTAMVDQVWNSS--NAAWDLGLRRNLNDLEVIEWTSLSHILL 203
E +PRLF L+ + + S + +WD G RR+LN+LE+ E L +L
Sbjct: 1187 RGGVLKEVFPRLFNLSRKQNHNISSFTGSDGFSLSWDFGFRRDLNELEITEAARLLDLLE 1246
Query: 204 SV-TIRSVNDSWCRPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKDVYPKKIKIFLW 263
V I S D LD S F+ S + + + + Y ++WK P K+KIF+W
Sbjct: 1247 GVRLITSRLDRRRWKLDPSGLFTCHSFCAHIQNCGEGEIFSPYTQIWKAKTPPKVKIFVW 1306
Query: 264 ELSHGGINTADRLQRRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGW 311
+ G +NT D LQRR P+L +SP C +C A E+ HL +HC ++ K W +
Sbjct: 1307 QAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGESVDHLLLHCPFSLKLWEPLLKEVNT 1366
BLAST of Lag0029489 vs. ExPASy TrEMBL
Match:
A0A5E4GJ11 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035891 PE=4 SV=1)
HSP 1 Score: 155.2 bits (391), Expect = 4.7e-34
Identity = 104/363 (28.65%), Postives = 152/363 (41.87%), Query Frame = 0
Query: 24 LPIKVAKILEKLIRDFFWEGSRGNGGMHNINWETTQLPILLGGLNIGHFRIRNMALMAKW 83
+PI VA +EKL+RDF WEG G H ++WE GGL +G R R+ L AKW
Sbjct: 626 IPIGVANRIEKLMRDFLWEGLDGKRN-HAVSWEVVGKAKFCGGLGVGSLRARSAVLRAKW 685
Query: 84 IWRFLHERDSLWYNII-------------------------------------------- 143
+WRF +E +LW+ +I
Sbjct: 686 LWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLRGCVFVVG 745
Query: 144 ------------------VEAYPRLFRLTTRSTAMVDQVWNSSN--AAWDLGLRRNLNDL 203
E +PRLF L+ + + +S +WD G RRNLN+L
Sbjct: 746 CGVRVRFWEDDWSQGGVLKEVFPRLFNLSRKQNHNISSFTSSDGLPLSWDFGFRRNLNEL 805
Query: 204 EVIEWTSLSHILLSVTI-RSVNDSWCRPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELW 263
E+ E L +L V + S D LD S F+ SL S + + Y ++W
Sbjct: 806 EITEVARLLDLLEGVRLFTSRLDKRIWKLDPSGLFTCHSLCSHIQNCGEGEIFPPYTQIW 865
Query: 264 KDVYPKKIKIFLWELSHGGINTADRLQRRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYA 311
K P K+KIF+W+ G +NT D LQRR P+L +SP C +C A ++ HL +HC ++
Sbjct: 866 KAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGDSVDHLLLHCPFS 925
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RVW29080.1 | 1.2e-34 | 31.17 | putative ribonuclease H protein [Vitis vinifera] | [more] |
VVA25489.1 | 3.4e-34 | 28.65 | Hypothetical predicted protein, partial [Prunus dulcis] | [more] |
VVA39726.1 | 9.8e-34 | 28.65 | Hypothetical predicted protein, partial [Prunus dulcis] | [more] |
BBN69746.1 | 1.7e-33 | 28.37 | VIRB2-interacting protein 2 [Prunus dulcis] | [more] |
BBN67784.1 | 1.7e-33 | 28.37 | VIRB2-interacting protein 2 [Prunus dulcis] | [more] |
Match Name | E-value | Identity | Description | |
P0C2F6 | 3.3e-08 | 20.53 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Match Name | E-value | Identity | Description | |
A0A438D0T1 | 5.6e-35 | 31.17 | Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_370 P... | [more] |
A0A5E4FED8 | 1.6e-34 | 28.65 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3... | [more] |
A0A2N9EGZ3 | 1.6e-34 | 32.25 | Molybdenum cofactor biosynthesis protein C OS=Fagus sylvatica OX=28930 GN=FSB_LO... | [more] |
M5XUF8 | 3.6e-34 | 29.43 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... | [more] |
A0A5E4GJ11 | 4.7e-34 | 28.65 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3... | [more] |
Match Name | E-value | Identity | Description | |