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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCAGAGCGAGAAGGTTTCCCCTGGTCCTAGAGATTTCGACATTATTAACGATTACATTGGAATGGAGAGTTATGTCGATTCGAAGGACGAACAGACGGCGGGCGACATGTCTCCGCCGACGAGTTTCACCGATGGAAATAGTAAGAGGGATTACAGAATGTGGGGAAAAGATCAGAGAGAGTATCCTCCGCCGATTCCTTTGCTGGTTCGGACCGAGAATCTGGCTTCCCACATGCCATGGGTGTTGAAACGGCACTACACCGGCGACGGGCGGCTGATTCTGAGGGAGGAGAAAGTGAGGCGCCATGAGTTCTTCCGTGCCCACAGATCCGATGGGCGGCTGATGCTGCAGCTGGTGGCCGTGGACGACCAGGTCTCCGATGAGTCGAATGTGGAAATGGGGGAGGAGGAGAGTCCGGCGGCGGAGGGCGATGAGAGTGAGGGCGGCAGAATGGTCGGCGTCGGCAGGGGGGAGTTTTATACGTATGGGAATGTGAGGGGCAGAGATCCAGCGTTTATGTTCGGAGTTGCAGTGCCTGCAGCAGGGAGCCTGAGGACCGTTCGAAGCTAA mRNA sequence ATGCAGAGCGAGAAGGTTTCCCCTGGTCCTAGAGATTTCGACATTATTAACGATTACATTGGAATGGAGAGTTATGTCGATTCGAAGGACGAACAGACGGCGGGCGACATGTCTCCGCCGACGAGTTTCACCGATGGAAATAGTAAGAGGGATTACAGAATGTGGGGAAAAGATCAGAGAGAGTATCCTCCGCCGATTCCTTTGCTGGTTCGGACCGAGAATCTGGCTTCCCACATGCCATGGGTGTTGAAACGGCACTACACCGGCGACGGGCGGCTGATTCTGAGGGAGGAGAAAGTGAGGCGCCATGAGTTCTTCCGTGCCCACAGATCCGATGGGCGGCTGATGCTGCAGCTGGTGGCCGTGGACGACCAGGTCTCCGATGAGTCGAATGTGGAAATGGGGGAGGAGGAGAGTCCGGCGGCGGAGGGCGATGAGAGTGAGGGCGGCAGAATGGTCGGCGTCGGCAGGGGGGAGTTTTATACGTATGGGAATGTGAGGGGCAGAGATCCAGCGTTTATGTTCGGAGTTGCAGTGCCTGCAGCAGGGAGCCTGAGGACCGTTCGAAGCTAA Coding sequence (CDS) ATGCAGAGCGAGAAGGTTTCCCCTGGTCCTAGAGATTTCGACATTATTAACGATTACATTGGAATGGAGAGTTATGTCGATTCGAAGGACGAACAGACGGCGGGCGACATGTCTCCGCCGACGAGTTTCACCGATGGAAATAGTAAGAGGGATTACAGAATGTGGGGAAAAGATCAGAGAGAGTATCCTCCGCCGATTCCTTTGCTGGTTCGGACCGAGAATCTGGCTTCCCACATGCCATGGGTGTTGAAACGGCACTACACCGGCGACGGGCGGCTGATTCTGAGGGAGGAGAAAGTGAGGCGCCATGAGTTCTTCCGTGCCCACAGATCCGATGGGCGGCTGATGCTGCAGCTGGTGGCCGTGGACGACCAGGTCTCCGATGAGTCGAATGTGGAAATGGGGGAGGAGGAGAGTCCGGCGGCGGAGGGCGATGAGAGTGAGGGCGGCAGAATGGTCGGCGTCGGCAGGGGGGAGTTTTATACGTATGGGAATGTGAGGGGCAGAGATCCAGCGTTTATGTTCGGAGTTGCAGTGCCTGCAGCAGGGAGCCTGAGGACCGTTCGAAGCTAA Protein sequence MQSEKVSPGPRDFDIINDYIGMESYVDSKDEQTAGDMSPPTSFTDGNSKRDYRMWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILREEKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDESNVEMGEEESPAAEGDESEGGRMVGVGRGEFYTYGNVRGRDPAFMFGVAVPAAGSLRTVRS
Homology
BLAST of Lag0029310 vs. NCBI nr
Match: XP_022141391.1 (uncharacterized protein LOC111011804, partial [Momordica charantia]) HSP 1 Score: 201.4 bits (511), Expect = 6.8e-48 Identity = 115/194 (59.28%), Postives = 133/194 (68.56%), Query Frame = 0 Query: 2 QSEKVSPGPRDFDIINDYIGMESYVDSKDEQTAGDMSPPTSFTDGNSKRDYRMW---GKD 61 QS++V P I+DYIGMES VD K+ QTA D PP + KR+ +MW G+ Sbjct: 33 QSQRVFPSSTRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRK 92
Query: 62 QREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILREEKVRRHEFFRAHRSDGRLMLQ 121 +REYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLIL EEKVR HE+FRAHRSDGRLMLQ Sbjct: 93 EREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFRAHRSDGRLMLQ 152
Query: 122 LVAVDDQVSDESNVEMGEEESPAAEGDESEGGRMVGVGRGEFYTYGNVRGRDPAFMFGVA 181 LVA+DD + + E+E D +GG+M + G R RDPA MFGVA Sbjct: 153 LVALDDGDGESGQDQEDEDE------DFEKGGKMKCLKNGIVR-----RRRDPALMFGVA 212
Query: 182 VPA--AGSLRTVRS 191 VPA AG+LRTVRS Sbjct: 213 VPALSAGTLRTVRS 215
BLAST of Lag0029310 vs. NCBI nr
Match: XP_023551237.1 (uncharacterized protein LOC111809117 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 199.1 bits (505), Expect = 3.4e-47 Identity = 119/193 (61.66%), Postives = 136/193 (70.47%), Query Frame = 0 Query: 2 QSEKVSP-GPRDFDIINDYIGMESYVDSKDEQTAGDMSPPTSFTD-GNSKRDYR---MWG 61 +S KVS P D + +DYIG+ES VD KD TA D +P SF + GNSKRD + M Sbjct: 10 RSNKVSSLVPSDIN-SDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGR 69
Query: 62 KDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILREEKVRRHEFFRAHRSDGRLM 121 KDQ+ YPPPIPLLVRTENLASH+PWV+KR YTGDGRLIL EEKV+ HEFFRAHRSDGRLM Sbjct: 70 KDQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLM 129
Query: 122 LQLVAVDDQVSDESNVEMGEEESPAAEGDESEGGRMVGVGRGEFYTYGNVRGRDPAFMFG 181 LQLV +DDQ DE + E EEES A G E G++ Y NVR RD AFMFG Sbjct: 130 LQLVTMDDQDLDEEDDEEVEEESTEAGGSEG----------GKWCKYENVRDRDAAFMFG 189
Query: 182 VAVPAAGSLRTVR 190 V V +AGSLR+VR Sbjct: 190 VEV-SAGSLRSVR 190
BLAST of Lag0029310 vs. NCBI nr
Match: XP_022939970.1 (uncharacterized protein LOC111445672 [Cucurbita moschata]) HSP 1 Score: 195.3 bits (495), Expect = 4.8e-46 Identity = 115/193 (59.59%), Postives = 133/193 (68.91%), Query Frame = 0 Query: 2 QSEKVSP-GPRDFDIINDYIGMESYVDSKDEQTAGDMSPPTSFTD-GNSKRDYR---MWG 61 +S KVS P D + +DYIG+ES VD KD TA D++P SF + GNSKRD + M Sbjct: 10 RSNKVSSLVPSDIN-SDDYIGVESCVDLKDNDTAADITPLASFPEGGNSKRDIKTSWMGR 69
Query: 62 KDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILREEKVRRHEFFRAHRSDGRLM 121 KDQ+ YPPPIPLLVRTENL SH+PWV+KR YTGDGRLIL EEKV+ HEFFRAHRSDGRLM Sbjct: 70 KDQKNYPPPIPLLVRTENLGSHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLM 129
Query: 122 LQLVAVDDQVSDESNVEMGEEESPAAEGDESEGGRMVGVGRGEFYTYGNVRGRDPAFMFG 181 LQLV +DDQ DE E ++E G EGG+ + Y NVR RD AFMFG Sbjct: 130 LQLVTMDDQELDEDGDEEEKKEECTEAGGSEEGGK--------WCKYENVRDRDAAFMFG 189
Query: 182 VAVPAAGSLRTVR 190 V V AGSLR+VR Sbjct: 190 VEV-GAGSLRSVR 192
BLAST of Lag0029310 vs. NCBI nr
Match: KAG7016540.1 (hypothetical protein SDJN02_21649 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 195.3 bits (495), Expect = 4.8e-46 Identity = 110/177 (62.15%), Postives = 125/177 (70.62%), Query Frame = 0 Query: 17 NDYIGMESYVDSKDEQTAGDMSPPTSFTD-GNSKRDYR---MWGKDQREYPPPIPLLVRT 76 +DYIG+ES VD KD TA D+SP SF + GNSKRD + M KDQ+ YPPPIPLLVRT Sbjct: 36 DDYIGVESCVDLKDNDTAADISPLASFPEGGNSKRDIKTSWMERKDQKNYPPPIPLLVRT 95
Query: 77 ENLASHMPWVLKRHYTGDGRLILREEKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDESNV 136 ENL SH+PWV+KR YTGDGRLIL EEKV+ HEFFRAHRSDGRLMLQLV +DDQ DE Sbjct: 96 ENLGSHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQLVTMDDQELDEDGD 155
Query: 137 EMGEEESPAAEGDESEGGRMVGVGRGEFYTYGNVRGRDPAFMFGVAVPAAGSLRTVR 190 E ++E G EGG+ + Y NVR RD AFMFGV V AGSLR+VR Sbjct: 156 EEEKKEECTEAGGSEEGGK--------WCKYENVRDRDAAFMFGVEV-TAGSLRSVR 203
BLAST of Lag0029310 vs. NCBI nr
Match: KAG6579017.1 (hypothetical protein SDJN03_23465, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 194.9 bits (494), Expect = 6.3e-46 Identity = 115/193 (59.59%), Postives = 133/193 (68.91%), Query Frame = 0 Query: 2 QSEKVSP-GPRDFDIINDYIGMESYVDSKDEQTAGDMSPPTSFTD-GNSKRDYR---MWG 61 +S KVS P D + +DYIG+ES VD KD TA D++P SF + GNSKRD + M Sbjct: 10 RSNKVSSLVPSDIN-SDDYIGVESCVDLKDNDTAADITPLASFPEGGNSKRDIKTSWMER 69
Query: 62 KDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILREEKVRRHEFFRAHRSDGRLM 121 KDQ+ YPPPIPLLVRTENL SH+PWV+KR YTGDGRLIL EEKV+ HEFFRAHRSDGRLM Sbjct: 70 KDQKNYPPPIPLLVRTENLGSHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLM 129
Query: 122 LQLVAVDDQVSDESNVEMGEEESPAAEGDESEGGRMVGVGRGEFYTYGNVRGRDPAFMFG 181 LQLV +DDQ DE E ++E G EGG+ + Y NVR RD AFMFG Sbjct: 130 LQLVTMDDQELDEDGDEEEKKEKCTEAGGSEEGGK--------WCKYENVRDRDAAFMFG 189
Query: 182 VAVPAAGSLRTVR 190 V V AGSLR+VR Sbjct: 190 VEV-GAGSLRSVR 192
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022141391.1 | 6.8e-48 | 59.28 | uncharacterized protein LOC111011804, partial [Momordica charantia] | [more] |
XP_023551237.1 | 3.4e-47 | 61.66 | uncharacterized protein LOC111809117 [Cucurbita pepo subsp. pepo] | [more] |
XP_022939970.1 | 4.8e-46 | 59.59 | uncharacterized protein LOC111445672 [Cucurbita moschata] | [more] |
KAG7016540.1 | 4.8e-46 | 62.15 | hypothetical protein SDJN02_21649 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6579017.1 | 6.3e-46 | 59.59 | hypothetical protein SDJN03_23465, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR021410 | The fantastic four family | PFAM | PF11250 | FAF | coord: 61..119 e-value: 1.8E-20 score: 72.9 |
IPR021410 | The fantastic four family | PANTHER | PTHR33155 | FANTASTIC FOUR-LIKE PROTEIN (DUF3049) | coord: 5..134 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 129..143 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 34..48 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 28..48 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 126..151 |
None | No IPR available | PANTHER | PTHR33155:SF36 | SUBFAMILY NOT NAMED | coord: 5..134 |
Relationships
The following mRNA feature(s) are a part of this gene:
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