Lag0028843 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028843
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr8: 31742242 .. 31744542 (+)
RNA-Seq ExpressionLag0028843
SyntenyLag0028843
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTTGTAGAGCCAAAAAGTTTCGATGGAGTCATGAAGTTCGATGGGAAAAATTTTGGATATTGGAAGATGCAAGTCAAGGATTATTTAACTTGCAAGAAAGTGCATAAGACATTGAAGGAGAGACCGAAAGATATGAAGGACGAAGATTGGGAAGCTCTAGATGAAGAGGCAGTTGCAACCATTAGGATGTGTTTGTCGATGGATGTGGCAAGTCTTGTAGCCCATGAGACAACTGCAGTCAAGTTGATGGAATCGCTTACAAACAGGTATGAAAAACCCTCTGCAAATAATAAGGTCTACCTAGTTAAGAAGTTTTTCAACATGCAAATGTCTGAGGATGCTTATGTGAATTCCTATATTAATGAGGTTACCACTTTGATTAATCAATTAAAATCTGTTAAGATAGAATTTTCTGATGAGGTGAATGCTATTCAGTTGTTAACGTCTTTACCTGATAGTTGGGAAACGATGAAGACAGCAGTGTCTAATTCGACTGGAAATAACACTTAAAAATTTTCAGAAGTTTGTGATTTAGCCATAACTGAGGAAATTCGTAGGCAGGGTAGTAATAAAGAGTCTACTGTAGGGTCAGCTTTGGTTATGACTAAAGGTAAAGATAAGGTTGATGAAGATAATGAACCGAGTAGCAGTAAGAAAAAGTGGAAAGGTAGGAATGAGGTAGAATGTTATTACTGCCATAAGAAAGGTCACTTCAAGTATCAGGGTAGGAAATTTAAAGAGGATCAGAAAAGAAAACCAAAGGCAAATATAGTGGATGAGGTTGTCTTAGCTTGTGTTGAGAGTGACACAAAGTATAGTAACCACTCATCAGATTGGATATTAGACAGTGCAACTTCTGTTCACATAGCTTCAGATAGGAGTTTGTTCACATCATTCACAGGAGGGCATCGTGGCCTTGTGAGGATGGGGAATGGTAGAACCTCCAAGACTAGAGGGATTGGAGATGTTAGTCTGAAGACAGAATGTGGAGATAAATTGGTACTGCGAGATGTCAGGTACGTGCCTAATATCAAGATGAATATTATTTCTATTGGTACATTGACAGATGATGGTTACATGTGTGAGTTTGGTAGTCGCCAGTGTAAACTCAAGTTCGGATCCCAGGTAGTGGCAGTTGGTCACAGGAAATCTACACTGTACAGATGTCAGTTGAATGTTGCCAAAGGTTCAGAGAGACATTGGATGCCAGTTAAAGCTGCAGATGGTAATGGTAGAGGTACAGTTGAGCCAGCAGCAAGGATAACCAATTTCGATCAGTCCGATCAAGATCCTTCAGTTCAGAAACAATTGGGAAGTCTAGAAGAGAAAGTTGATGGCTATCGTGAATCCCCAGTTGTCAGACGGTCGAATGAATTGAAGAAGTCGCTTAGGCGAGTCGAGGCATCAAAGTGGAAGGCCAGGGCAGTTGCTAAGGTCAAAGGTCAGGTCTCTAGCTTGGTAACAAGTTTGAATAGAGGATTCAAGCAATTCTCAGATTGTATCTTCTTCAGGAACAGTTGTTCGGGTTGGAAGAAGATGACAGGTGATACCACTTAGCTGAAGTGGGAATACGTGTCTGTCTTTTTCGTCTGGGAGACAGGTCCACGTAGCTAGTCCATACCTCGGGGTGAGCACAGATGAGCTACAATTATACTCTGATAGTTGCCTGTTTTCGTGAGTTTGTTGTTTTTCAGGTATTTTGAGCCTTGGAGTTTACCAAGAAGATCAGAGATAACAGTTGTAATGGGAGTAGATCCTTGGAGTTTGCCAAGATGTTTAGAGTTTTGTTGCAGTGGGAGACGAGATCTTTGTTTTGTCTCCAAGTGGGAAATTGTTGGAGTGTGGAGTCAAAACTCCTTCAGCCTCAATTTGTCGTGCATGGAAAGAAAAGAAGGGAATGGGCCCAAGGCCCATTTGTCAGACGGTCGAATGAATTGAAGAAGTCGCTTAGGCGAGTTGAGGCATCAAAGTGGAAGGCCAGGGCAGTTGCTAAGGTCAAAGGTCAGGTCTCTAGCTTGGTAACAAGTTTGAATAGAGGATTCAAGCAATTCTCAGATTGTATCTTCTTCAGGAACAGTTGTTCGGGTTGGAAGAAGATGACAGGTGATACCACTTAGCTGAAGTGGGAATACGTGTCTGTCTTTTTCGTCTGGGAGACAGGTCCACGTAGCTAGTCCATACCTCGGGGCGAGCACAGATGAGCTACAGTTATACTCTGATAGTTGCCTGTTTTCGTGAGTTTGTTGTTTTTCAGGTATTTTGAGCCTTGGAGTTTACCAAGAAGATCAGAGATAA

mRNA sequence

ATGGGTTTTGTAGAGCCAAAAAGTTTCGATGGAGTCATGAAGTTCGATGGGAAAAATTTTGGATATTGGAAGATGCAAGTCAAGGATTATTTAACTTGCAAGAAAGTGCATAAGACATTGAAGGAGAGACCGAAAGATATGAAGGACGAAGATTGGGAAGCTCTAGATGAAGAGGCAGTTGCAACCATTAGGATGTGTTTGTCGATGGATGTGGCAAGTCTTGTAGCCCATGAGACAACTGCAGTCAAGTTGATGGAATCGCTTACAAACAGGTATGAAAAACCCTCTGCAAATAATAAGGTCTACCTAGTTAAGAAGTTTTTCAACATGCAAATGTCTGAGGATGCTTATGTGAATTCCTATATTAATGAGGTTACCACTTTGATTAATCAATTAAAATCTGTTAAGATAGAATTTTCTGATGAGGTGAATGCTATTCAGTTGTTAACGTCTTTACCTGATAGTTGGGAAACGATGAAGACAGCAGTGCAGGGTAGTAATAAAGAGTCTACTGTAGGGTCAGCTTTGGTTATGACTAAAGGTAAAGATAAGGTTGATGAAGATAATGAACCGAGTAGCAGTAAGAAAAAGTGGAAAGGTAGGAATGAGGTAGAATGTTATTACTGCCATAAGAAAGGTCACTTCAAGTATCAGGGTAGGAAATTTAAAGAGGATCAGAAAAGAAAACCAAAGGCAAATATAGTGGATGAGGTTGTCTTAGCTTGTGTTGAGAGTGACACAAAGTATAGTAACCACTCATCAGATTGGATATTAGACAGTGCAACTTCTGTTCACATAGCTTCAGATAGGAGTTTGTTCACATCATTCACAGGAGGGCATCGTGGCCTTGTGAGGATGGGGAATGGTAGAACCTCCAAGACTAGAGGGATTGGAGATGTTAGTCTGAAGACAGAATGTGGAGATAAATTGGTACTGCGAGATGTCAGGTACGTGCCTAATATCAAGATGAATATTATTTCTATTGGTACATTGACAGATGATGGTTACATGTGTGAGTTTGGTAGTCGCCAGTGTAAACTCAAGTTCGGATCCCAGGTAGTGGCAGTTGGTCACAGGAAATCTACACTGTACAGATGTCAGTTGAATGTTGCCAAAGGTTCAGAGAGACATTGGATGCCAGTTAAAGCTGCAGATGGTAATGGTAGAGGTACAGTTGAGCCAGCAGCAAGGATAACCAATTTCGATCAGTCCGATCAAGATCCTTCAGTTCAGAAACAATTGGGAAGTCTAGAAGAGAAAGTTGATGGCTATCGTGAATCCCCAGTTGTCAGACGGTCGAATGAATTGAAGAAGTCGCTTAGGCGAGTCGAGGCATCAAAGTGGAAGGCCAGGGCAGTTGCTAAGGTCAAAGGTCAGGTCTCTAGCTTGGTAACAAGTTTGAATAGAGGATTCAAGCAATTCTCAGATTGTATCTTCTTCAGGAACAGTTGTTCGGGTTGGAAGAAGATGACAGCCTTGGAGTTTACCAAGAAGATCAGAGATAACAGTTGTAATGGGAGTAGATCCTTGGAGTTTGCCAAGATGTTTAGAGTTTTGTTGCAGTGGGAGACGAGATCTTTGTTTTGTCTCCAAGTGGGAAATTGTTGGAGTGTGGAGTCAAAACTCCTTCAGCCTCAATTTGTCGTGCATGGAAAGAAAAGAAGGGAATGGGCCCAAGGCCCATTTGTCAGACGGTCGAATGAATTGAAGAAGTCGCTTAGGCGAGTTGAGGCATCAAAGTGGAAGGCCAGGGCAGTTGCTAAGGTCAAAGGTCAGGTCTCTAGCTTGGTAACAAGTTTGAATAGAGGATTCAAGCAATTCTCAGATTGTATCTTCTTCAGGAACAGTTGTTCGGGTTGGAAGAAGATGACAGGTATTTTGAGCCTTGGAGTTTACCAAGAAGATCAGAGATAA

Coding sequence (CDS)

ATGGGTTTTGTAGAGCCAAAAAGTTTCGATGGAGTCATGAAGTTCGATGGGAAAAATTTTGGATATTGGAAGATGCAAGTCAAGGATTATTTAACTTGCAAGAAAGTGCATAAGACATTGAAGGAGAGACCGAAAGATATGAAGGACGAAGATTGGGAAGCTCTAGATGAAGAGGCAGTTGCAACCATTAGGATGTGTTTGTCGATGGATGTGGCAAGTCTTGTAGCCCATGAGACAACTGCAGTCAAGTTGATGGAATCGCTTACAAACAGGTATGAAAAACCCTCTGCAAATAATAAGGTCTACCTAGTTAAGAAGTTTTTCAACATGCAAATGTCTGAGGATGCTTATGTGAATTCCTATATTAATGAGGTTACCACTTTGATTAATCAATTAAAATCTGTTAAGATAGAATTTTCTGATGAGGTGAATGCTATTCAGTTGTTAACGTCTTTACCTGATAGTTGGGAAACGATGAAGACAGCAGTGCAGGGTAGTAATAAAGAGTCTACTGTAGGGTCAGCTTTGGTTATGACTAAAGGTAAAGATAAGGTTGATGAAGATAATGAACCGAGTAGCAGTAAGAAAAAGTGGAAAGGTAGGAATGAGGTAGAATGTTATTACTGCCATAAGAAAGGTCACTTCAAGTATCAGGGTAGGAAATTTAAAGAGGATCAGAAAAGAAAACCAAAGGCAAATATAGTGGATGAGGTTGTCTTAGCTTGTGTTGAGAGTGACACAAAGTATAGTAACCACTCATCAGATTGGATATTAGACAGTGCAACTTCTGTTCACATAGCTTCAGATAGGAGTTTGTTCACATCATTCACAGGAGGGCATCGTGGCCTTGTGAGGATGGGGAATGGTAGAACCTCCAAGACTAGAGGGATTGGAGATGTTAGTCTGAAGACAGAATGTGGAGATAAATTGGTACTGCGAGATGTCAGGTACGTGCCTAATATCAAGATGAATATTATTTCTATTGGTACATTGACAGATGATGGTTACATGTGTGAGTTTGGTAGTCGCCAGTGTAAACTCAAGTTCGGATCCCAGGTAGTGGCAGTTGGTCACAGGAAATCTACACTGTACAGATGTCAGTTGAATGTTGCCAAAGGTTCAGAGAGACATTGGATGCCAGTTAAAGCTGCAGATGGTAATGGTAGAGGTACAGTTGAGCCAGCAGCAAGGATAACCAATTTCGATCAGTCCGATCAAGATCCTTCAGTTCAGAAACAATTGGGAAGTCTAGAAGAGAAAGTTGATGGCTATCGTGAATCCCCAGTTGTCAGACGGTCGAATGAATTGAAGAAGTCGCTTAGGCGAGTCGAGGCATCAAAGTGGAAGGCCAGGGCAGTTGCTAAGGTCAAAGGTCAGGTCTCTAGCTTGGTAACAAGTTTGAATAGAGGATTCAAGCAATTCTCAGATTGTATCTTCTTCAGGAACAGTTGTTCGGGTTGGAAGAAGATGACAGCCTTGGAGTTTACCAAGAAGATCAGAGATAACAGTTGTAATGGGAGTAGATCCTTGGAGTTTGCCAAGATGTTTAGAGTTTTGTTGCAGTGGGAGACGAGATCTTTGTTTTGTCTCCAAGTGGGAAATTGTTGGAGTGTGGAGTCAAAACTCCTTCAGCCTCAATTTGTCGTGCATGGAAAGAAAAGAAGGGAATGGGCCCAAGGCCCATTTGTCAGACGGTCGAATGAATTGAAGAAGTCGCTTAGGCGAGTTGAGGCATCAAAGTGGAAGGCCAGGGCAGTTGCTAAGGTCAAAGGTCAGGTCTCTAGCTTGGTAACAAGTTTGAATAGAGGATTCAAGCAATTCTCAGATTGTATCTTCTTCAGGAACAGTTGTTCGGGTTGGAAGAAGATGACAGGTATTTTGAGCCTTGGAGTTTACCAAGAAGATCAGAGATAA

Protein sequence

MGFVEPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVHKTLKERPKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNMQMSEDAYVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVQGSNKESTVGSALVMTKGKDKVDEDNEPSSSKKKWKGRNEVECYYCHKKGHFKYQGRKFKEDQKRKPKANIVDEVVLACVESDTKYSNHSSDWILDSATSVHIASDRSLFTSFTGGHRGLVRMGNGRTSKTRGIGDVSLKTECGDKLVLRDVRYVPNIKMNIISIGTLTDDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCQLNVAKGSERHWMPVKAADGNGRGTVEPAARITNFDQSDQDPSVQKQLGSLEEKVDGYRESPVVRRSNELKKSLRRVEASKWKARAVAKVKGQVSSLVTSLNRGFKQFSDCIFFRNSCSGWKKMTALEFTKKIRDNSCNGSRSLEFAKMFRVLLQWETRSLFCLQVGNCWSVESKLLQPQFVVHGKKRREWAQGPFVRRSNELKKSLRRVEASKWKARAVAKVKGQVSSLVTSLNRGFKQFSDCIFFRNSCSGWKKMTGILSLGVYQEDQR
Homology
BLAST of Lag0028843 vs. NCBI nr
Match: KAG7584790.1 (Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 244.2 bits (622), Expect = 3.0e-60
Identity = 154/412 (37.38%), Postives = 221/412 (53.64%), Query Frame = 0

Query: 5   EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVHKTLKERPKDMKDEDWEALDEEAVATIR 64
           E  S  G+ KFDG +F +W+MQ++DYL  KK+H+ L  +P+ M  E+W+ LD + +  IR
Sbjct: 4   EDGSAHGIGKFDGTDFAFWRMQIEDYLYGKKLHQPLSMKPEKMAQEEWDLLDRQVLGVIR 63

Query: 65  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNMQMSEDAYVNSYINE 124
           + LS +VA  VA E T   LM+ L++ YEKPSANNKV+L+KK F+++M E   V +++NE
Sbjct: 64  LTLSKNVAHNVAKEKTTEGLMKVLSDMYEKPSANNKVFLMKKLFHLKMEEGGPVATHVNE 123

Query: 125 VTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVQGS------------------ 184
             T++NQL SV+IEF DEV A+ LL SLP+SWE M+ AV  S                  
Sbjct: 124 FNTIVNQLSSVEIEFDDEVRALILLASLPNSWEPMRAAVSNSVGNQKLKFVDVRDRILGE 183

Query: 185 ------NKESTVGSAL-VMTKGKDKVDEDNEPSSSKKK-----WKGRNEVECYYCHKKGH 244
                   E+++ SA  V  +G+D+   +     SK +      K R  VEC+ C K GH
Sbjct: 184 EVRRIDTGETSMSSAFNVENRGRDQNRRNQNRGRSKSRNGKGQSKSRKPVECWNCGKTGH 243

Query: 245 FKYQ--GRKFKEDQKRKPKANIVDEV---VLACVESDTKYSNHSS--------------- 304
           FK        KE+ K      + DE+   +L  V+S  K   H +               
Sbjct: 244 FKSNCWAPPKKENNKGGGANAVTDEIADALLVFVDSPRKGETHDTAVNTTKASISYVDSP 303

Query: 305 --DWILDSATSVHIASDRSLFTSFTGGHRGLVRMGNGRTSKTRGIGDVSLKTECGDKLVL 364
              W+LDS  S H   DR++  ++  G+ G V + NG      GIGD++LK   G    +
Sbjct: 304 IDSWVLDSGASFHTTPDRNIMENYVAGNYGKVYLANGVPLDIVGIGDINLKMSDGLVWKI 363

BLAST of Lag0028843 vs. NCBI nr
Match: KAG7561662.1 (Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 242.7 bits (618), Expect = 8.9e-60
Identity = 152/412 (36.89%), Postives = 219/412 (53.16%), Query Frame = 0

Query: 5   EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVHKTLKERPKDMKDEDWEALDEEAVATIR 64
           E  S  G+ KFDG +F +W+MQ++DYL  KK+H+ L  +P+ M  E+W+ LD + +  IR
Sbjct: 4   EDGSAHGIGKFDGTDFAFWRMQIEDYLYGKKLHQPLSMKPEKMAQEEWDLLDRQVLGVIR 63

Query: 65  MCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNMQMSEDAYVNSYINE 124
           + LS +VA  VA E T   LM+ L++ YEKPSANNKV+L+KK F+++M E   V +++NE
Sbjct: 64  LTLSKNVAHNVAKEKTTEGLMKVLSDMYEKPSANNKVFLMKKLFHLKMEEGGPVATHVNE 123

Query: 125 VTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVQGS------------------ 184
             T++NQL SV+IEF DEV A+ L+ SLP+SWE M+ AV  S                  
Sbjct: 124 FNTIVNQLSSVEIEFDDEVRALILIASLPNSWEPMRAAVSNSVGNQKLKFVDVRDRILGE 183

Query: 185 -------NKESTVGSALVMTKGKDKVDEDNEPSSSKKK-----WKGRNEVECYYCHKKGH 244
                   + ST  +  V  +G+D+   +     SK +      K R  VEC+ C K GH
Sbjct: 184 EVRRIDTGETSTSSAFNVENRGRDQNRRNQNRGRSKSRNGKGQSKSRKPVECWNCGKTGH 243

Query: 245 FKYQ--GRKFKEDQKRKPKANIVDEV---VLACVESDTKYSNHSS--------------- 304
           FK        KE+ K      + DE+   +L  V+S  K   H +               
Sbjct: 244 FKSNCWAPPKKENNKGGGANAVTDEIADALLVSVDSPRKGETHDTAVNTTKASISYVDSP 303

Query: 305 --DWILDSATSVHIASDRSLFTSFTGGHRGLVRMGNGRTSKTRGIGDVSLKTECGDKLVL 364
              W+LDS  S H   DR++  ++  G+ G V + NG      GIGD++LK   G    +
Sbjct: 304 IDSWVLDSGASFHTTPDRNIMENYVVGNYGKVYLANGVPLDIVGIGDINLKMSDGLVWKI 363

BLAST of Lag0028843 vs. NCBI nr
Match: TKS02608.1 (hypothetical protein D5086_0000161380 [Populus alba])

HSP 1 Score: 241.9 bits (616), Expect = 1.5e-59
Identity = 155/408 (37.99%), Postives = 223/408 (54.66%), Query Frame = 0

Query: 11  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KTLKERPKDMKDEDWEALDEEAVATIRMCLSM 70
           G+ KFDG +FGYWKMQ++DYL  KK+H   L  +P+ M+ E+W+ LD + +  IR+ LS 
Sbjct: 9   GIEKFDGTDFGYWKMQIEDYLYGKKLHLPLLGSKPEKMEAEEWQLLDRQVLGIIRLSLSR 68

Query: 71  DVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNMQMSEDAYVNSYINEVTTLI 130
            VA  V  E +  KLME+L+  YEKPSANNKV+L+KK FN++M E+  V  ++N   T+ 
Sbjct: 69  RVAHNVTKEKSTAKLMEALSGMYEKPSANNKVHLMKKLFNLKMVENTSVTQHLNNFNTIT 128

Query: 131 NQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAV-------------------------Q 190
           NQL SV+IEF DE+ A+ LL SLP SWE M+TAV                         +
Sbjct: 129 NQLSSVEIEFDDEIRALILLASLPSSWEGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRK 188

Query: 191 GSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SKKKWKGRNEVECYYCHKKGHFKYQ 250
            S + S+ GSAL + T+G+  D+        S   SK K+  R +VEC+ C K GHF   
Sbjct: 189 DSGESSSSGSALNINTRGRRHDRGSSRGRSKSRYRSKSKFGSRKQVECWNCGKPGHFSRN 248

Query: 251 GRKFKEDQKRKPKANI--VDEVVLACVESDTKYSNHSSDWILDSATSVHIASDRSLFTSF 310
             K K+ +     A    V + ++  V+S         +WILDS  S H      +  ++
Sbjct: 249 CTKPKKPEADSANATTDEVQDALILVVQSQI------DEWILDSGASFHCTPHNEMLQNY 308

Query: 311 TGGHRGLVRMGNGRTSKTRGIGDVSLKTECGDKLVLRDVRYVPNIKMNIISIGTLTDDGY 370
            GG  G+V + +G   K  GIGDV +KT  G    L++VR+VP +K  +IS+G L D G+
Sbjct: 309 VGGDHGVVYLADGTPLKIVGIGDVQIKTMNGSIWTLQNVRHVPELKKKLISVGQLDDSGH 368

Query: 371 MCEFGSRQCKLKFGSQVVAVGHRKSTLYRC--QLNVAKGSERHWMPVK 383
              F     K+  G+ V+A G +  TL     +L V++ +E  W  +K
Sbjct: 369 SILFAGGMWKVSKGAMVLARGKKTGTLKFSDPELQVSR-NEDEWANIK 409

BLAST of Lag0028843 vs. NCBI nr
Match: TKS09800.1 (hypothetical protein D5086_0000089010 [Populus alba])

HSP 1 Score: 240.7 bits (613), Expect = 3.4e-59
Identity = 150/387 (38.76%), Postives = 213/387 (55.04%), Query Frame = 0

Query: 11  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KTLKERPKDMKDEDWEALDEEAVATIRMCLSM 70
           G+ KFDG +FGYWKMQ++DYL  KK+H   L  +P+ M+ E+W+ LD + +  IR+ LS 
Sbjct: 9   GIEKFDGTDFGYWKMQIEDYLYGKKLHLPLLGSKPEKMEAEEWQLLDRQVLGIIRLSLSR 68

Query: 71  DVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNMQMSEDAYVNSYINEVTTLI 130
            VA  V  E +  KLME+L+  YEKPSANNKV+L+KK FN++M E+  V  ++N   T+ 
Sbjct: 69  RVAHNVTKEKSTAKLMEALSGMYEKPSANNKVHLMKKLFNLKMVENTSVTQHLNNFNTIT 128

Query: 131 NQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAV-------------------------Q 190
           NQL SV+IEF DE+ A+ LL SLP SWE M+TAV                         +
Sbjct: 129 NQLSSVEIEFDDEIRALILLASLPSSWEGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRK 188

Query: 191 GSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SKKKWKGRNEVECYYCHKKGHFKYQ 250
            S + S+ GSAL + T+G+  D+        S   SK K+  R +VEC+ C K GHF   
Sbjct: 189 DSGESSSSGSALNINTRGRRHDRGSSRGRSKSRYRSKSKFGSRKQVECWNCGKPGHFSRN 248

Query: 251 GRKFKEDQKRKPKANI--VDEVVLACVESDTKYSNHSSDWILDSATSVHIASDRSLFTSF 310
             K K+ +     A    V + ++  V+S         +WILDS  S H      +  ++
Sbjct: 249 CTKPKKPEADSANATTDEVQDALILAVQSQI------DEWILDSGASFHCTPHNEMLQNY 308

Query: 311 TGGHRGLVRMGNGRTSKTRGIGDVSLKTECGDKLVLRDVRYVPNIKMNIISIGTLTDDGY 364
            GG  G+V + +G   K  GIGDV +KT  G    L++VR+VP +K  +IS+G L D G+
Sbjct: 309 VGGDHGVVYLADGTPLKIVGIGDVQIKTMNGSIWTLQNVRHVPELKKKLISVGQLDDSGH 368

BLAST of Lag0028843 vs. NCBI nr
Match: TKR89927.1 (hypothetical protein D5086_0000238200 [Populus alba])

HSP 1 Score: 238.4 bits (607), Expect = 1.7e-58
Identity = 148/387 (38.24%), Postives = 212/387 (54.78%), Query Frame = 0

Query: 11  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KTLKERPKDMKDEDWEALDEEAVATIRMCLSM 70
           G+ KFDG +FGYWKMQ++DYL  KK+H   L  +P+ M+ E+W+ LD + +  IR+ LS 
Sbjct: 9   GIEKFDGTDFGYWKMQIEDYLYGKKLHLPLLGSKPEKMEAEEWQLLDRQVLGIIRLSLSR 68

Query: 71  DVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNMQMSEDAYVNSYINEVTTLI 130
            VA  V  E +  KLME+L+  YEKPSANNKV+L+KK FN++M E+  V  ++N   T+ 
Sbjct: 69  RVAHNVTKEKSTAKLMEALSGMYEKPSANNKVHLMKKLFNLKMVENTSVTQHLNNFNTIT 128

Query: 131 NQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAV-------------------------Q 190
           NQL SV+IEF DE+ A+ LL SLP SWE M+TAV                         +
Sbjct: 129 NQLSSVEIEFDDEIRALILLASLPSSWEGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRK 188

Query: 191 GSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SKKKWKGRNEVECYYCHKKGHFKYQ 250
            S + S+ GSAL + T+G+  D+        S   SK K+  R +VEC+ C K GHF   
Sbjct: 189 DSGESSSSGSALNINTRGRRHDRGSSRGRSKSRYRSKSKFGSRKQVECWNCGKPGHFSRN 248

Query: 251 GRKFKEDQKRKPKANI--VDEVVLACVESDTKYSNHSSDWILDSATSVHIASDRSLFTSF 310
             K K+ +     A    V + ++  V+S         +WILDS  S H      +  ++
Sbjct: 249 CTKPKKPEADSANATTDEVQDALILAVQSQI------DEWILDSGASFHCTPHNEMLQNY 308

Query: 311 TGGHRGLVRMGNGRTSKTRGIGDVSLKTECGDKLVLRDVRYVPNIKMNIISIGTLTDDGY 364
            GG  G+V + +G      GIGDV +KT  G    L+++R+VP +K  +IS+G L D G+
Sbjct: 309 VGGDHGVVYLADGTPLNIVGIGDVQIKTMNGSIWTLQNIRHVPELKKKLISVGQLDDSGH 368

BLAST of Lag0028843 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 6.4e-45
Identity = 134/404 (33.17%), Postives = 200/404 (49.50%), Query Frame = 0

Query: 12  VMKFDGKN-FGYWKMQVKDYLTCKKVHKTL---KERPKDMKDEDWEALDEEAVATIRMCL 71
           V KF+G N F  W+ +++D L  + +HK L    ++P  MK EDW  LDE A + IR+ L
Sbjct: 8   VAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHL 67

Query: 72  SMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNMQMSEDAYVNSYINEVTT 131
           S DV + +  E TA  +   L + Y   +  NK+YL K+ + + MSE     S++N    
Sbjct: 68  SDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNG 127

Query: 132 LINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAV--------------------QGSN 191
           LI QL ++ ++  +E  AI LL SLP S++ + T +                    +   
Sbjct: 128 LITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMRK 187

Query: 192 KESTVGSALVMT-KGKDKVDEDNEPSSSKKKWKGRNEVE-----CYYCHKKGHFK----- 251
           K    G AL+   +G+      N    S  + K +N  +     CY C++ GHFK     
Sbjct: 188 KPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPN 247

Query: 252 -YQGRKFKEDQKRKPKANIV----DEVVLACVESD--TKYSNHSSDWILDSATSVHIASD 311
             +G+     QK       +    D VVL   E +     S   S+W++D+A S H    
Sbjct: 248 PRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPV 307

Query: 312 RSLFTSFTGGHRGLVRMGNGRTSKTRGIGDVSLKTECGDKLVLRDVRYVPNIKMNIISIG 371
           R LF  +  G  G V+MGN   SK  GIGD+ +KT  G  LVL+DVR+VP+++MN+IS  
Sbjct: 308 RDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGI 367

Query: 372 TLTDDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCQLNVAKG 374
            L  DGY   F +++ +L  GS V+A G  + TLYR    + +G
Sbjct: 368 ALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQG 411

BLAST of Lag0028843 vs. ExPASy Swiss-Prot
Match: P25601 (Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5B PE=5 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.6e-06
Identity = 32/87 (36.78%), Postives = 49/87 (56.32%), Query Frame = 0

Query: 242 CVESDTKYSNHSSDWILDSATSVHIASDRSLFTSFTGGHRGLVRMGNGRTSKTRGIGDVS 301
           C+ S T  +  SS+WI D+  + H+  DRS+F+SFT   R     G G +    G G V+
Sbjct: 65  CMLSSTVPATKSSEWIFDTGCTSHMCHDRSIFSSFTRSSRKDFVRGVGGSIPIMGSGTVN 124

Query: 302 LKTECGDKLVLRDVRYVPNIKMNIISI 329
           + T     + L DV YVP++ +N+IS+
Sbjct: 125 IGT-----VQLHDVSYVPDLPVNLISV 146

BLAST of Lag0028843 vs. ExPASy TrEMBL
Match: A0A2N9G318 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21677 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.1e-60
Identity = 155/408 (37.99%), Postives = 225/408 (55.15%), Query Frame = 0

Query: 11  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KTLKERPKDMKDEDWEALDEEAVATIRMCLSM 70
           G+ KFDG +FGYWKMQ++DYL  KK+H   L ++P  M+D +W  LD + +  IR+ LS 
Sbjct: 10  GIEKFDGTDFGYWKMQIEDYLYGKKLHLPLLGKKPNKMEDAEWALLDRQVLGVIRLTLSR 69

Query: 71  DVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNMQMSEDAYVNSYINEVTTLI 130
            VA  V  ETT V LM +L+  YEKPSANNKV+L+KK FN++M+E A V  Y+NE  T+ 
Sbjct: 70  SVAHNVVKETTTVGLMTALSGMYEKPSANNKVHLMKKLFNLKMAEGAAVAKYLNEFNTIT 129

Query: 131 NQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVQ---GSNK------------------ 190
           NQL SV+IEF DE+ A+ +L SLP+SWE M+ AV    G  K                  
Sbjct: 130 NQLSSVEIEFDDEIRALIVLASLPNSWEAMRMAVSNSAGKGKLKYDDIRDLILSEEVRRR 189

Query: 191 ----ESTVGSALV-------MTKGKDKVDEDNEPSSSKKKWKGRNEVECYYCHKKGHFKY 250
               ++  G A V         K ++     N+ S S+ K +     EC++C KKGH + 
Sbjct: 190 DACIDNAEGQAFVTENRGRSRNKWRNNRATFNDRSKSRDKSQHTETRECFHCGKKGHIRI 249

Query: 251 QGRKFKEDQ---------KRKPKANIVDE---VVLACVESDTKY-SNHSSDWILDSATSV 310
             + ++++Q           K    IVD+   VVL+  E   ++  N   +W++DSA + 
Sbjct: 250 NCKHWRKEQTEDKDHKHDDEKGTTAIVDDEEVVVLSVQEQKCEHVDNIDDEWVVDSAATH 309

Query: 311 HIASDRSLFTSFTGGHRGLVRMGNGRTSKTRGIGDVSLKTECGDKLVLRDVRYVPNIKMN 370
           H+   + LFT++  G  G V+MGN   SK  GIGDV +KT  G  ++L++VR+VP++  N
Sbjct: 310 HVVRTKELFTTYKAGDFGTVKMGNTSYSKIVGIGDVCIKTNVGFTVMLKNVRHVPDLCFN 369

Query: 371 IISIGTLTDDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCQLNVAK 373
           +IS   +   GY    G+ + KL  G  VVA G     LY+ ++   K
Sbjct: 370 LISTPVMDRAGYCNHLGNGRWKLAKGPMVVARGRICCGLYKTRVKACK 417

BLAST of Lag0028843 vs. ExPASy TrEMBL
Match: A0A2N9FA13 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11593 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.3e-60
Identity = 154/408 (37.75%), Postives = 224/408 (54.90%), Query Frame = 0

Query: 11  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KTLKERPKDMKDEDWEALDEEAVATIRMCLSM 70
           G+ KFDG +FGYWKMQ++DYL  KK+H   L ++P  M+D +W  LD + +  IR+ LS 
Sbjct: 204 GIEKFDGTDFGYWKMQIEDYLYGKKLHLPLLGKKPNKMEDAEWALLDRQVLGVIRLTLSR 263

Query: 71  DVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNMQMSEDAYVNSYINEVTTLI 130
            VA  V  ETT V LM +L+  YEKPSANNKV+L+KK FN++M+E A V  ++NE  T+ 
Sbjct: 264 SVAHNVVKETTTVGLMTALSGMYEKPSANNKVHLMKKLFNLKMAEGAAVAKHLNEFNTIT 323

Query: 131 NQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVQ---GSNK------------------ 190
           NQL SV+IEF DE+ A+ +L SLP+SWE M+ AV    G  K                  
Sbjct: 324 NQLSSVEIEFDDEIRALIVLASLPNSWEAMRMAVSNSAGKGKLKYDDIRDLILSEEVRRR 383

Query: 191 ----ESTVGSALV-------MTKGKDKVDEDNEPSSSKKKWKGRNEVECYYCHKKGHFKY 250
               ++  G A V         K ++     N+ S S+ K +     EC++C KKGH + 
Sbjct: 384 DACIDNAEGQAFVTENRGRSRNKWRNNRATFNDRSKSRDKSQHTETRECFHCGKKGHIRI 443

Query: 251 ----------QGRKFKEDQKRKPKANIVDE--VVLACVESDTKY-SNHSSDWILDSATSV 310
                     + +  K D ++   A + DE  VVL+  E   ++  N   +W++DSA + 
Sbjct: 444 NCKHWRKEQTEDKNHKHDDEKGTTAIVDDEEVVVLSVQEQKCEHVDNIDDEWVVDSAATH 503

Query: 311 HIASDRSLFTSFTGGHRGLVRMGNGRTSKTRGIGDVSLKTECGDKLVLRDVRYVPNIKMN 370
           H+   + LFT++  G  G V+MGN   SK  GIGDV +KT  G  ++L++VR+VP++  N
Sbjct: 504 HVVRTKELFTTYKAGDFGTVKMGNTSYSKIVGIGDVCIKTNVGFTVMLKNVRHVPDLCFN 563

Query: 371 IISIGTLTDDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCQLNVAK 373
           +IS   +   GY    G+ + KL  G  VVA G     LY+ ++   K
Sbjct: 564 LISTPVMDRAGYCNHLGNGRWKLAKGPMVVARGRICCGLYKTRVKACK 611

BLAST of Lag0028843 vs. ExPASy TrEMBL
Match: A0A2N9GXF9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34888 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.3e-60
Identity = 162/447 (36.24%), Postives = 238/447 (53.24%), Query Frame = 0

Query: 11  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KTLKERPKDMKDEDWEALDEEAVATIRMCLSM 70
           G+ KFDG +FGYWKMQ++DYL  KK+H   L ++P  M+D +W  LD + +  IR+ LS 
Sbjct: 10  GIEKFDGTDFGYWKMQIEDYLYGKKLHLPLLGKKPDKMEDAEWALLDRQVLGVIRLTLSR 69

Query: 71  DVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNMQMSEDAYVNSYINEVTTLI 130
            VA  V  ETT V LM +L+  YEKP ANNKV+L+KK FN++M+E A V  ++NE  T+ 
Sbjct: 70  SVAHNVVKETTTVGLMTALSGMYEKPLANNKVHLMKKLFNLKMAEGAAVAKHLNEFNTIT 129

Query: 131 NQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVQGSNK--------------------- 190
           NQL  V+IEF+DE+ A+ +L SLP+SWE M+ AV  S                       
Sbjct: 130 NQLSFVEIEFNDEIRALIILASLPNSWEAMRMAVSNSVGKCKLKYDDIRDLILSEEVRRR 189

Query: 191 ----ESTVGSALVMT---KGKDKVDED----NEPSSSKKKWKGRNEVECYYCHKKGHFKY 250
               ++  G A V     + ++K   D    N+ S S  K +     EC++C KKGH + 
Sbjct: 190 DACIDNAEGQAFVTENRGRSRNKWRNDQATFNDRSKSIDKSQHTETRECFHCGKKGHIRI 249

Query: 251 QGRKF----------KEDQKRKPKANIVDE--VVLACVESDTKY-SNHSSDWILDSATSV 310
             R +          K D K+   A +VDE  VVL+  E   ++  N   +W++DSA + 
Sbjct: 250 NCRHWRKEQTEDKDHKHDDKKGTTAVVVDEEVVVLSVQEQKCEHVDNIDDEWVVDSAATH 309

Query: 311 HIASDRSLFTSFTGGHRGLVRMGNGRTSKTRGIGDVSLKTECGDKLVLRDVRYVPNIKMN 370
           H+   + LFT +  G    V+MGN   SK  GIGDV +KT  G  ++L++VR+VP++  N
Sbjct: 310 HVVRTKELFTMYKAGDFSTVKMGNTSYSKIVGIGDVCIKTNVGYTVILKNVRHVPDLCFN 369

Query: 371 IISIGTLTDDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCQLNVAKGSERHWMPVKAA 412
           +IS   +   GY    G+ + KL  G  VVA G     LYR ++   KG  +  +P  A 
Sbjct: 370 LISTPVMDRAGYCNHLGNGRWKLAKGPMVVARGRICCGLYRTRV---KGLVKFSLPENAT 429

BLAST of Lag0028843 vs. ExPASy TrEMBL
Match: A0A2N9IS39 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55006 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 5.6e-60
Identity = 154/408 (37.75%), Postives = 224/408 (54.90%), Query Frame = 0

Query: 11  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KTLKERPKDMKDEDWEALDEEAVATIRMCLSM 70
           G+ KFDG +FGYWKMQ++DYL  KK+H   L ++P  M+D +W  LD + +  IR+ LS 
Sbjct: 10  GIEKFDGTDFGYWKMQIEDYLYGKKLHLPLLGKKPDKMEDAEWALLDRQVLGVIRLTLSR 69

Query: 71  DVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNMQMSEDAYVNSYINEVTTLI 130
            VA  V  ETT V LM +L+  YEKPSANNKV+L+KK FN++M+E A V  ++NE  T+ 
Sbjct: 70  SVAHNVVKETTTVGLMTALSGMYEKPSANNKVHLMKKLFNLKMAEGAAVAKHLNEFNTIT 129

Query: 131 NQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVQ---GSNK------------------ 190
           NQL SV+IEF DE+ A+ +L SLP+SWE M+ AV    G  K                  
Sbjct: 130 NQLSSVEIEFDDEIRALIVLASLPNSWEAMRMAVSNSAGKGKLKYDDIRDLILSEEVRRR 189

Query: 191 ----ESTVGSALV-------MTKGKDKVDEDNEPSSSKKKWKGRNEVECYYCHKKGHFKY 250
               ++  G A V         K ++     N+ S S+ K +     EC++C KKGH + 
Sbjct: 190 DACIDNAEGQAFVTENRGRSRNKWRNNRATFNDRSKSRDKSQHTETRECFHCGKKGHIRI 249

Query: 251 ----------QGRKFKEDQKRKPKANIVDE--VVLACVESDTKY-SNHSSDWILDSATSV 310
                     + +  K D ++   A + DE  VVL+  E   ++  N   +W++DSA + 
Sbjct: 250 NCKHWRKEQTEDKNHKHDDEKGTTAIVDDEEVVVLSVQEQKCEHVDNIDDEWVVDSAATH 309

Query: 311 HIASDRSLFTSFTGGHRGLVRMGNGRTSKTRGIGDVSLKTECGDKLVLRDVRYVPNIKMN 370
           H+   + LFT++  G  G V+MGN   SK  GIGDV +KT  G  ++L++VR+VP++  N
Sbjct: 310 HVVRTKELFTTYKAGDFGTVKMGNTSYSKIVGIGDVCIKTNVGFTVMLKNVRHVPDLCFN 369

Query: 371 IISIGTLTDDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCQLNVAK 373
           +IS   +   GY    G+ + KL  G  VVA G     LY+ ++   K
Sbjct: 370 LISTPVMDRAGYCNHLGNGRWKLAKGPMVVARGRICCGLYKTRVKACK 417

BLAST of Lag0028843 vs. ExPASy TrEMBL
Match: A0A4U5PY83 (CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000161380 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 7.3e-60
Identity = 155/408 (37.99%), Postives = 223/408 (54.66%), Query Frame = 0

Query: 11  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KTLKERPKDMKDEDWEALDEEAVATIRMCLSM 70
           G+ KFDG +FGYWKMQ++DYL  KK+H   L  +P+ M+ E+W+ LD + +  IR+ LS 
Sbjct: 9   GIEKFDGTDFGYWKMQIEDYLYGKKLHLPLLGSKPEKMEAEEWQLLDRQVLGIIRLSLSR 68

Query: 71  DVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNMQMSEDAYVNSYINEVTTLI 130
            VA  V  E +  KLME+L+  YEKPSANNKV+L+KK FN++M E+  V  ++N   T+ 
Sbjct: 69  RVAHNVTKEKSTAKLMEALSGMYEKPSANNKVHLMKKLFNLKMVENTSVTQHLNNFNTIT 128

Query: 131 NQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAV-------------------------Q 190
           NQL SV+IEF DE+ A+ LL SLP SWE M+TAV                         +
Sbjct: 129 NQLSSVEIEFDDEIRALILLASLPSSWEGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRK 188

Query: 191 GSNKESTVGSAL-VMTKGK--DKVDEDNEPSS---SKKKWKGRNEVECYYCHKKGHFKYQ 250
            S + S+ GSAL + T+G+  D+        S   SK K+  R +VEC+ C K GHF   
Sbjct: 189 DSGESSSSGSALNINTRGRRHDRGSSRGRSKSRYRSKSKFGSRKQVECWNCGKPGHFSRN 248

Query: 251 GRKFKEDQKRKPKANI--VDEVVLACVESDTKYSNHSSDWILDSATSVHIASDRSLFTSF 310
             K K+ +     A    V + ++  V+S         +WILDS  S H      +  ++
Sbjct: 249 CTKPKKPEADSANATTDEVQDALILVVQSQI------DEWILDSGASFHCTPHNEMLQNY 308

Query: 311 TGGHRGLVRMGNGRTSKTRGIGDVSLKTECGDKLVLRDVRYVPNIKMNIISIGTLTDDGY 370
            GG  G+V + +G   K  GIGDV +KT  G    L++VR+VP +K  +IS+G L D G+
Sbjct: 309 VGGDHGVVYLADGTPLKIVGIGDVQIKTMNGSIWTLQNVRHVPELKKKLISVGQLDDSGH 368

Query: 371 MCEFGSRQCKLKFGSQVVAVGHRKSTLYRC--QLNVAKGSERHWMPVK 383
              F     K+  G+ V+A G +  TL     +L V++ +E  W  +K
Sbjct: 369 SILFAGGMWKVSKGAMVLARGKKTGTLKFSDPELQVSR-NEDEWANIK 409

BLAST of Lag0028843 vs. TAIR 10
Match: AT3G29785.1 (unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 5.3e-10
Identity = 32/88 (36.36%), Postives = 56/88 (63.64%), Query Frame = 0

Query: 14  KFDGKNFGYWKMQVKDYLTCKKVHKTLKERPKDMKDEDWEALDEEAVATIRMCLSMDVAS 73
           K DG ++ + +M+++DYL  KK+H+ L ++ + M  +DW  L  + +  IR+ +S ++A 
Sbjct: 8   KVDGTSYSFCRMKIEDYLYGKKLHQPLGKKVETMSQDDWNILYRQVLDVIRLTISKNIAH 67

Query: 74  LVAHETTAVKLMESLTNRYEKPSANNKV 102
            VA E +   LM+ L++ Y+KPS NN V
Sbjct: 68  NVAKEKSPDGLMKVLSDIYKKPSTNNTV 95

BLAST of Lag0028843 vs. TAIR 10
Match: AT3G21000.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 46.2 bits (108), Expect = 1.1e-04
Identity = 56/287 (19.51%), Postives = 119/287 (41.46%), Query Frame = 0

Query: 62  TIRMCLSMDVASLV--AHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNMQMSEDAYVN 121
           T+    + DV  L+   +E   ++ +E +T R           L K+  +++M +    +
Sbjct: 89  TLSASSAKDVWDLLRKGNEQATIRRLEQVTIR----------RLEKQLEDLKMVDKESGS 148

Query: 122 SYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVQGSNKESTVGSALVMT 181
           SY+++   ++ +L   K+E SD      + T+L  S++ + + ++       + S  ++ 
Sbjct: 149 SYLDKALEILERLGRAKLEKSDYEICKNVFTTLSGSFDGLDSMLEELIDVHKMTSKSLVE 208

Query: 182 KGKDKVDEDNEPSS-----SKKKWKGRNEVECYYCHKKGHFKYQGRKFKEDQKRKPKANI 241
               +V E +   +        + K ++E  C  C+K  H +   +      K + +  I
Sbjct: 209 YFYYRVHESSTEEAIFGLLKDLRLKSKSEKWCGLCYKNNHNQEDCKFRIHTDKEEKEDEI 268

Query: 242 VDEVVLACVESDTKYSNHSSDWILDSATSVHIASDRSLFTSFTGGHRGLVRMGNGRTSKT 301
           V +  L  V +    +     WI+     +++      FT+     +  V   +G     
Sbjct: 269 VVDYRLETVPNLGAKTYDDDIWIIHKMAPINMTPYVKYFTTLDRTFKATVGTVDGTVLLV 328

Query: 302 RGIGDVSLKTECGDKLVLRDVRYVPNIKMNIISIGTLTDDGYMCEFG 342
            G GDV ++ + G K  +R+V +VP +  N++S G +    Y    G
Sbjct: 329 EGKGDVKIRMKEGKKKTIRNVIFVPGLNRNVLSFGKMVSKRYSISTG 365

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7584790.13.0e-6037.38Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa][more]
KAG7561662.18.9e-6036.89Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa][more]
TKS02608.11.5e-5937.99hypothetical protein D5086_0000161380 [Populus alba][more]
TKS09800.13.4e-5938.76hypothetical protein D5086_0000089010 [Populus alba][more]
TKR89927.11.7e-5838.24hypothetical protein D5086_0000238200 [Populus alba][more]
Match NameE-valueIdentityDescription
P109786.4e-4533.17Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P256012.6e-0636.78Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain AT... [more]
Match NameE-valueIdentityDescription
A0A2N9G3181.1e-6037.99CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2167... [more]
A0A2N9FA134.3e-6037.75Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11593 PE=4 SV=1[more]
A0A2N9GXF94.3e-6036.24CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3488... [more]
A0A2N9IS395.6e-6037.75CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5500... [more]
A0A4U5PY837.3e-6037.99CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000161380... [more]
Match NameE-valueIdentityDescription
AT3G29785.15.3e-1036.36unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bact... [more]
AT3G21000.11.1e-0419.51Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 52..171
e-value: 1.8E-25
score: 89.3
NoneNo IPR availablePANTHERPTHR34676:SF1ZINC FINGER, CCHC-TYPE, TUBBY C-TERMINAL-LIKE DOMAIN PROTEIN-RELATEDcoord: 177..427
NoneNo IPR availablePANTHERPTHR34676FAMILY NOT NAMEDcoord: 177..427
NoneNo IPR availablePANTHERPTHR34676FAMILY NOT NAMEDcoord: 12..165
NoneNo IPR availablePANTHERPTHR34676:SF1ZINC FINGER, CCHC-TYPE, TUBBY C-TERMINAL-LIKE DOMAIN PROTEIN-RELATEDcoord: 12..165

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028843.1Lag0028843.1mRNA