Lag0028262 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAACGAGAAGAACAGAAGAAAAAGAGGTCGAAGACAAGACAAGAGAAGAAGTAGAGAAAAAAGCAGAGGAAGAAATTTTCCCAGACAAAGGGAAGACAAGGGCAAAGGTATTGTTAAAGCATCACCGGAACCTGAAGATAGTGAAACAGAGGAGCCACGATTGCCATATAACCACTTCATCAACAATCTTGCTCGAGCAAAATATGTCGAGATGCTGAGAAGAGACTTTTTGTTTGACCGTGGGTTTGGCGATGATTTGCCACGACTCTTGTGGACTGGAATAGCGAACCATGGCTGGAGTCAATTTTGTGCAAAGCCGGATCCGGTCAATTCCAACATTGTTCGAGAGTTTTATGCAAATATTGATGATCAAGAGGGATTTCAGGCTATCGTCCGAGGAGTGCCCGTTGACTGGAGCCCAAGAGCTATCAATTCTTTATTCAACCTCCAGGACTTTCCACACGCATGCTTCAATGAGATGGTGGTGGCACCATCGAATGATCAGTTAAATGCGGCTGTCCGAGAGGTTGGCATCGATGGAGACTATCGAAGACGAAAAACGCACATTTCAAGCTACTTATCTGAAGAGTGA ATGCAGAACGAGAAGAACAGAAGAAAAAGAGGTCGAAGACAAGACAAGAGAAGAAGTAGAGAAAAAAGCAGAGGAAGAAATTTTCCCAGACAAAGGGAAGACAAGGGCAAAGGTATTGTTAAAGCATCACCGGAACCTGAAGATAGTGAAACAGAGGAGCCACGATTGCCATATAACCACTTCATCAACAATCTTGCTCGAGCAAAATATGTCGAGATGCTGAGAAGAGACTTTTTGTTTGACCGTGGGTTTGGCGATGATTTGCCACGACTCTTGTGGACTGGAATAGCGAACCATGGCTGGAGTCAATTTTGTGCAAAGCCGGATCCGGTCAATTCCAACATTGTTCGAGAGTTTTATGCAAATATTGATGATCAAGAGGGATTTCAGGCTATCGTCCGAGGAGTGCCCGTTGACTGGAGCCCAAGAGCTATCAATTCTTTATTCAACCTCCAGGACTTTCCACACGCATGCTTCAATGAGATGGTGGTGGCACCATCGAATGATCAGTTAAATGCGGCTGTCCGAGAGGTTGGCATCGATGGAGACTATCGAAGACGAAAAACGCACATTTCAAGCTACTTATCTGAAGAGTGA ATGCAGAACGAGAAGAACAGAAGAAAAAGAGGTCGAAGACAAGACAAGAGAAGAAGTAGAGAAAAAAGCAGAGGAAGAAATTTTCCCAGACAAAGGGAAGACAAGGGCAAAGGTATTGTTAAAGCATCACCGGAACCTGAAGATAGTGAAACAGAGGAGCCACGATTGCCATATAACCACTTCATCAACAATCTTGCTCGAGCAAAATATGTCGAGATGCTGAGAAGAGACTTTTTGTTTGACCGTGGGTTTGGCGATGATTTGCCACGACTCTTGTGGACTGGAATAGCGAACCATGGCTGGAGTCAATTTTGTGCAAAGCCGGATCCGGTCAATTCCAACATTGTTCGAGAGTTTTATGCAAATATTGATGATCAAGAGGGATTTCAGGCTATCGTCCGAGGAGTGCCCGTTGACTGGAGCCCAAGAGCTATCAATTCTTTATTCAACCTCCAGGACTTTCCACACGCATGCTTCAATGAGATGGTGGTGGCACCATCGAATGATCAGTTAAATGCGGCTGTCCGAGAGGTTGGCATCGATGGAGACTATCGAAGACGAAAAACGCACATTTCAAGCTACTTATCTGAAGAGTGA MQNEKNRRKRGRRQDKRRSREKSRGRNFPRQREDKGKGIVKASPEPEDSETEEPRLPYNHFINNLARAKYVEMLRRDFLFDRGFGDDLPRLLWTGIANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQDFPHACFNEMVVAPSNDQLNAAVREVGIDGDYRRRKTHISSYLSEE Homology
BLAST of Lag0028262 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]) HSP 1 Score: 68.2 bits (165), Expect = 9.3e-08 Identity = 30/58 (51.72%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of Lag0028262 vs. NCBI nr
Match: KAE8695166.1 (hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]) HSP 1 Score: 67.4 bits (163), Expect = 1.6e-07 Identity = 32/98 (32.65%), Postives = 50/98 (51.02%), Query Frame = 0
BLAST of Lag0028262 vs. NCBI nr
Match: PON42276.1 (hypothetical protein PanWU01x14_283280 [Parasponia andersonii]) HSP 1 Score: 66.6 bits (161), Expect = 2.7e-07 Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 0
BLAST of Lag0028262 vs. NCBI nr
Match: PON90635.1 (hypothetical protein TorRG33x02_134920 [Trema orientale]) HSP 1 Score: 65.9 bits (159), Expect = 4.6e-07 Identity = 41/112 (36.61%), Postives = 55/112 (49.11%), Query Frame = 0
BLAST of Lag0028262 vs. NCBI nr
Match: PON85987.1 (hypothetical protein TorRG33x02_181920, partial [Trema orientale]) HSP 1 Score: 65.5 bits (158), Expect = 6.0e-07 Identity = 29/58 (50.00%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of Lag0028262 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.5e-08 Identity = 30/58 (51.72%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of Lag0028262 vs. ExPASy TrEMBL
Match: A0A6A2ZUE4 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110733pilonHSYRG00282 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 7.7e-08 Identity = 32/98 (32.65%), Postives = 50/98 (51.02%), Query Frame = 0
BLAST of Lag0028262 vs. ExPASy TrEMBL
Match: A0A2P5B0K0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283280 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.3e-07 Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 0
BLAST of Lag0028262 vs. ExPASy TrEMBL
Match: A0A2P5EYL5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_134920 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.2e-07 Identity = 41/112 (36.61%), Postives = 55/112 (49.11%), Query Frame = 0
BLAST of Lag0028262 vs. ExPASy TrEMBL
Match: A0A2P5EK98 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_181920 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.9e-07 Identity = 29/58 (50.00%), Postives = 35/58 (60.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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