Lag0028206 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028206
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReplication enhancer
Locationchr8: 15536625 .. 15538031 (-)
RNA-Seq ExpressionLag0028206
SyntenyLag0028206
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATGGGATTCACGCACAGGGGAAAACATAACTGCACGTCAGCTGGAGAATGGCGTTTTTATTTGGGAAACCCCAAATCCCCTATATTTCAAGATCGTGTCGCACACGACGCGACCGTTCCAAACACAACACGACATAATCGAACTGGAGATTCGATTCAATCACAACCTTCGGAGGGCTTTGGGGATTCACAAATGTTTCATAACCTTGAAGATCTACACTCGCTTACGACCTCCGACCGGGCTTTTCTTGCGAGTCTTTAAATTTCAATGTATGAAATATCTAGAGATGTTAGGTGTTGTTTCCTTTTTTAATGTATTACGGGCAGTAGATCACGTTATGTGGACTGTACTAGTTGGAACAATTTCAGTACATCGTAATCAGTTAATAAAAATGCGCCTTTAATTATTCACGTTGTTCGAGACATAAGTAGCCACGTTTAAAGGTTACGTAACCAGTATATAGCCATGCGTATATGGCATCTACACTAATTCCGCATTTTAATGATAGCGTTATGCGTAACTAGTAAGTATTTTATAACCAACGCCTCTTAATTATATAACGGTGACTACCGTTCACATGTTAGTTAATGACGAAGCGGTATAGGATGGCTATTTCACATGCACATAGACGAGTAACTACCATGAGCAATTAGAATATATCGATCATTTTTTAACACGAGACACGAATCACACGGCATCCACAACTTCCACATAGTGTATACACACAAGTTGGGACTTAGTTTTCAGAAACGATGGGTACAACCAATCTGTAGTGTCCATTCGGACATGGACAACAAGGTAACCGCATGAAACACAACATGTCGGTCTTCACAATATTGGACCTTGAACGGTCCTTTTCATTGTAGGGGAACTACCGCGGTTTAAGGTTGGCCGATGTCTTGGACAGTGGGGACAGGCACAGACAGCAACAGTTGGACGTTGAAGATCTATATCCGTCGCACCATCCCGGCGAATGGTATACGCGGTTAATCTACAGGTTGCCTCATTGTAAAGACGACAACGGACAACTGAAATTAAATCCCTTACCAAATCAAAGCCCAAAGTATTTGGGCTGTATTGTTCTTCAATCAATTGTAGATATTTAACGGCCAACATAACACGTAGGCCATGGACAGTATCGGGAATGGGATTTAATAATGGATCGAACATGGCTACATTACGGCCCACGTATAAAGGCCTTTATAATGCGAAACCCAATAACTAAGCTTTCAGGGATCCATGTGATTGGCTGTGATTGGTCAGAATACGTCATGGTGGGTCCCACTATAAAAGCGGCCCCAAGGGCATCACGGTTCGTTCGGAGCGCTTCATATCAGATTCAAGGCATATCAACAACTTCCAAATAGGGGTGTGCAACAACAACCAAGTCGAGCTGGACTGA

mRNA sequence

ATGGAATGGGATTCACGCACAGGGGAAAACATAACTGCACGTCAGCTGGAGAATGGCGTTTTTATTTGGGAAACCCCAAATCCCCTATATTTCAAGATCGTGTCGCACACGACGCGACCGTTCCAAACACAACACGACATAATCGAACTGGAGATTCGATTCAATCACAACCTTCGGAGGGCTTTGGGGATTCACAAATGTTTCATAACCTTGAAGATCTACACTCGCTTACGACCTCCGACCGGGCTTTTCTTGCGAGGGAACTACCGCGGTTTAAGGTTGGCCGATGTCTTGGACAGTGGGGACAGGCACAGACAGCAACAGTTGGACGTTGAAGATCTATATCCGTCGCACCATCCCGGCGAATGGTATACGCGGTTAATCTACAGATATTTAACGGCCAACATAACACGTAGGCCATGGACAGTATCGGGAATGGGATTTAATAATGGATCGAACATGGCTACATTACGGCCCACAATACGTCATGGTGGGTCCCACTATAAAAGCGGCCCCAAGGGCATCACGGTTCGTTCGGAGCGCTTCATATCAGATTCAAGGCATATCAACAACTTCCAAATAGGGGTGTGCAACAACAACCAAGTCGAGCTGGACTGA

Coding sequence (CDS)

ATGGAATGGGATTCACGCACAGGGGAAAACATAACTGCACGTCAGCTGGAGAATGGCGTTTTTATTTGGGAAACCCCAAATCCCCTATATTTCAAGATCGTGTCGCACACGACGCGACCGTTCCAAACACAACACGACATAATCGAACTGGAGATTCGATTCAATCACAACCTTCGGAGGGCTTTGGGGATTCACAAATGTTTCATAACCTTGAAGATCTACACTCGCTTACGACCTCCGACCGGGCTTTTCTTGCGAGGGAACTACCGCGGTTTAAGGTTGGCCGATGTCTTGGACAGTGGGGACAGGCACAGACAGCAACAGTTGGACGTTGAAGATCTATATCCGTCGCACCATCCCGGCGAATGGTATACGCGGTTAATCTACAGATATTTAACGGCCAACATAACACGTAGGCCATGGACAGTATCGGGAATGGGATTTAATAATGGATCGAACATGGCTACATTACGGCCCACAATACGTCATGGTGGGTCCCACTATAAAAGCGGCCCCAAGGGCATCACGGTTCGTTCGGAGCGCTTCATATCAGATTCAAGGCATATCAACAACTTCCAAATAGGGGTGTGCAACAACAACCAAGTCGAGCTGGACTGA

Protein sequence

MEWDSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRRALGIHKCFITLKIYTRLRPPTGLFLRGNYRGLRLADVLDSGDRHRQQQLDVEDLYPSHHPGEWYTRLIYRYLTANITRRPWTVSGMGFNNGSNMATLRPTIRHGGSHYKSGPKGITVRSERFISDSRHINNFQIGVCNNNQVELD
Homology
[Close]
BLAST of Lag0028206 vs. NCBI nr
Match: QGR25313.1 (replication enhancer protein [Tomato leaf curl New Delhi virus] >QPL11260.1 AC3 protein [Tomato leaf curl New Delhi virus] >CRK54648.1 replication enhancer protein [Tomato leaf curl New Delhi virus])

HSP 1 Score: 137.9 bits (346), Expect = 9.9e-29
Identity = 60/83 (72.29%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 4  DSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRRALG 63
          DSRTGE ITA + E+GVFIWE PNPLYFKI+ H +RPF T HDII+++I+FNHNLR+ALG
Sbjct: 4  DSRTGEYITAHRAESGVFIWEVPNPLYFKILKHDSRPFLTNHDIIKVQIQFNHNLRKALG 63

Query: 64 IHKCFITLKIYTRLRPPTGLFLR 87
          IHKCF+T +I+T LRPPTG+FLR
Sbjct: 64 IHKCFLTFQIWTGLRPPTGIFLR 86

[Close]
BLAST of Lag0028206 vs. NCBI nr
Match: ABB52042.1 (C3 [Tomato leaf curl New Delhi virus [Pakistan:Solanum:1997]])

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-28
Identity = 60/86 (69.77%), Postives = 74/86 (86.05%), Query Frame = 0 

Query: 1  MEWDSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRR 60
          M  DSRTGE ITA + E+GVFIWE PNPLYFKI+ H +RPF T HDII+++I+FNHNLR+
Sbjct: 1  MIMDSRTGEYITAHRAESGVFIWEVPNPLYFKILKHDSRPFLTNHDIIKVQIQFNHNLRK 60

Query: 61 ALGIHKCFITLKIYTRLRPPTGLFLR 87
          ALG+HKCF+T +I+T LRPPTG+FLR
Sbjct: 61 ALGLHKCFLTFQIWTGLRPPTGIFLR 86

[Close]
BLAST of Lag0028206 vs. NCBI nr
Match: ABB52055.1 (C3 [Tomato leaf curl New Delhi virus [Pakistan:Solanum:1997]])

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-28
Identity = 60/86 (69.77%), Postives = 73/86 (84.88%), Query Frame = 0 

Query: 1  MEWDSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRR 60
          M  DSRTGE  TA Q E+GVFIWE PNPLYFKI+ H +RPF T HDII+++I+FNHNLR+
Sbjct: 1  MIMDSRTGEYFTAHQAESGVFIWEVPNPLYFKILKHDSRPFLTNHDIIKVQIQFNHNLRK 60

Query: 61 ALGIHKCFITLKIYTRLRPPTGLFLR 87
          ALG+HKCF+T +I+T LRPPTG+FLR
Sbjct: 61 ALGLHKCFLTFQIWTGLRPPTGIFLR 86

[Close]
BLAST of Lag0028206 vs. NCBI nr
Match: QPN02338.1 (Replication enhancer protein [Tomato leaf curl New Delhi virus])

HSP 1 Score: 136.7 bits (343), Expect = 2.2e-28
Identity = 59/83 (71.08%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 4  DSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRRALG 63
          DSRTGE ITA + E+GV+IWE PNPLYFKI+ H +RPF T HDII+++I+FNHNLR+ALG
Sbjct: 4  DSRTGEYITAHRAESGVYIWEVPNPLYFKILKHDSRPFLTNHDIIKVQIQFNHNLRKALG 63

Query: 64 IHKCFITLKIYTRLRPPTGLFLR 87
          IHKCF+T +I+T LRPPTG+FLR
Sbjct: 64 IHKCFLTFQIWTGLRPPTGIFLR 86

[Close]
BLAST of Lag0028206 vs. NCBI nr
Match: AMB18886.1 (replication enhancer protein [Tomato leaf curl New Delhi virus])

HSP 1 Score: 134.8 bits (338), Expect = 8.4e-28
Identity = 58/83 (69.88%), Postives = 72/83 (86.75%), Query Frame = 0 

Query: 4  DSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRRALG 63
          DSRTGE ITA + E+GVFIW  PNPLYFKI+ H +RPF T HDII+++I+FNHNLRRALG
Sbjct: 4  DSRTGEYITADRAESGVFIWTVPNPLYFKILKHDSRPFLTNHDIIKVQIQFNHNLRRALG 63

Query: 64 IHKCFITLKIYTRLRPPTGLFLR 87
          +HKCF+T +++T LRPPTG+FLR
Sbjct: 64 LHKCFLTFQVWTGLRPPTGIFLR 86

[Close]
BLAST of Lag0028206 vs. ExPASy Swiss-Prot
Match: P27265 (Replication enhancer protein OS=Tomato yellow leaf curl virus (strain Israel) OX=66366 GN=C3 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.7e-28
Identity = 59/96 (61.46%), Postives = 70/96 (72.92%), Query Frame = 0 

Query: 4  DSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRRALG 63
          DSRTGE ITA Q ENGVFIWE  NPLYFKI  H+ RPF   HDII ++IRFNHN+R+ +G
Sbjct: 2  DSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDIISIQIRFNHNIRKVMG 61

Query: 64 IHKCFITLKIYTRLRPPTGLFLR-GNYRGLRLADVL 99
          IHKCF+  +I+T L+P TG FLR   Y  L+  D L
Sbjct: 62 IHKCFLDFRIWTTLQPQTGHFLRVFRYEVLKYLDSL 97

[Close]
BLAST of Lag0028206 vs. ExPASy Swiss-Prot
Match: P36281 (Replication enhancer protein OS=Tomato leaf curl virus (strain Australia) OX=223353 GN=C3 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.6e-27
Identity = 54/83 (65.06%), Postives = 63/83 (75.90%), Query Frame = 0 

Query: 4  DSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRRALG 63
          DSRTGE ITARQ  NG +IW  PNPLYFKI+ H  RPF   HDII++ I+FNHNLRRAL 
Sbjct: 2  DSRTGEPITARQAMNGEYIWRVPNPLYFKIIKHHKRPFNYNHDIIQVRIQFNHNLRRALA 61

Query: 64 IHKCFITLKIYTRLRPPTGLFLR 87
          IHKCF+   ++TRL+P T  FLR
Sbjct: 62 IHKCFLDFTVFTRLQPATWRFLR 84

[Close]
BLAST of Lag0028206 vs. ExPASy Swiss-Prot
Match: Q08590 (Replication enhancer protein OS=Indian cassava mosaic virus OX=31600 GN=AC3 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.2e-26
Identity = 53/83 (63.86%), Postives = 64/83 (77.11%), Query Frame = 0 

Query: 4  DSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRRALG 63
          DSRTGE ITA Q  NGVFIWE PNPLYFKI+ H  RPF    DII ++IRFNHNLR+ALG
Sbjct: 2  DSRTGELITAAQAMNGVFIWEVPNPLYFKIIQHDNRPFVMNQDIITVQIRFNHNLRKALG 61

Query: 64 IHKCFITLKIYTRLRPPTGLFLR 87
          +H+C++  K++T L+P T  FLR
Sbjct: 62 LHQCWMDFKVWTTLQPQTWRFLR 84

[Close]
BLAST of Lag0028206 vs. ExPASy Swiss-Prot
Match: Q9DXE7 (Replication enhancer protein OS=Tomato yellow leaf curl China virus OX=185793 GN=C3 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.2e-26
Identity = 53/83 (63.86%), Postives = 64/83 (77.11%), Query Frame = 0 

Query: 4  DSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRRALG 63
          DSRTGE +TA Q ENGV+IW   NPLYFKI  H  RPF   HDII ++++FN+NLR+ALG
Sbjct: 2  DSRTGELLTAAQSENGVYIWTVKNPLYFKITKHHERPFLRNHDIITIQVQFNYNLRKALG 61

Query: 64 IHKCFITLKIYTRLRPPTGLFLR 87
          IHKCF+T +I+TRL P T  FLR
Sbjct: 62 IHKCFLTCQIWTRLHPQTSHFLR 84

[Close]
BLAST of Lag0028206 vs. ExPASy Swiss-Prot
Match: P14969 (Replication enhancer protein OS=African cassava mosaic virus (isolate Nigerian) OX=222073 GN=AC3 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-24
Identity = 52/83 (62.65%), Postives = 60/83 (72.29%), Query Frame = 0 

Query: 4  DSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRRALG 63
          D RTGE ITA Q  NGV+ WE  NPLYF I  H  RPF    DII +++RFNHNLR+ LG
Sbjct: 2  DLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQDIITVQVRFNHNLRKELG 61

Query: 64 IHKCFITLKIYTRLRPPTGLFLR 87
          IHKCF+  +I+T LRP TGLFLR
Sbjct: 62 IHKCFLNFRIWTTLRPQTGLFLR 84

[Close]
BLAST of Lag0028206 vs. ExPASy TrEMBL
Match: A0A1Z5AZ67 (Replication enhancer OS=Tomato leaf curl New Delhi virus OX=223347 GN=AC3 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 4.8e-29
Identity = 60/83 (72.29%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 4  DSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRRALG 63
          DSRTGE ITA + E+GVFIWE PNPLYFKI+ H +RPF T HDII+++I+FNHNLR+ALG
Sbjct: 4  DSRTGEYITAHRAESGVFIWEVPNPLYFKILKHDSRPFLTNHDIIKVQIQFNHNLRKALG 63

Query: 64 IHKCFITLKIYTRLRPPTGLFLR 87
          IHKCF+T +I+T LRPPTG+FLR
Sbjct: 64 IHKCFLTFQIWTGLRPPTGIFLR 86

[Close]
BLAST of Lag0028206 vs. ExPASy TrEMBL
Match: Q0R4Q7 (Replication enhancer OS=Tomato leaf curl New Delhi virus [Pakistan:Solanum:1997] OX=407834 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 6.3e-29
Identity = 60/86 (69.77%), Postives = 73/86 (84.88%), Query Frame = 0 

Query: 1  MEWDSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRR 60
          M  DSRTGE  TA Q E+GVFIWE PNPLYFKI+ H +RPF T HDII+++I+FNHNLR+
Sbjct: 1  MIMDSRTGEYFTAHQAESGVFIWEVPNPLYFKILKHDSRPFLTNHDIIKVQIQFNHNLRK 60

Query: 61 ALGIHKCFITLKIYTRLRPPTGLFLR 87
          ALG+HKCF+T +I+T LRPPTG+FLR
Sbjct: 61 ALGLHKCFLTFQIWTGLRPPTGIFLR 86

[Close]
BLAST of Lag0028206 vs. ExPASy TrEMBL
Match: Q0R4S0 (Replication enhancer OS=Tomato leaf curl New Delhi virus [Pakistan:Solanum:1997] OX=407834 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 6.3e-29
Identity = 60/86 (69.77%), Postives = 74/86 (86.05%), Query Frame = 0 

Query: 1  MEWDSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRR 60
          M  DSRTGE ITA + E+GVFIWE PNPLYFKI+ H +RPF T HDII+++I+FNHNLR+
Sbjct: 1  MIMDSRTGEYITAHRAESGVFIWEVPNPLYFKILKHDSRPFLTNHDIIKVQIQFNHNLRK 60

Query: 61 ALGIHKCFITLKIYTRLRPPTGLFLR 87
          ALG+HKCF+T +I+T LRPPTG+FLR
Sbjct: 61 ALGLHKCFLTFQIWTGLRPPTGIFLR 86

[Close]
BLAST of Lag0028206 vs. ExPASy TrEMBL
Match: A0A0Y0AIU9 (Replication enhancer OS=Tomato leaf curl New Delhi virus OX=223347 GN=AC3 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.1e-28
Identity = 58/83 (69.88%), Postives = 72/83 (86.75%), Query Frame = 0 

Query: 4  DSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRRALG 63
          DSRTGE ITA + E+GVFIW  PNPLYFKI+ H +RPF T HDII+++I+FNHNLRRALG
Sbjct: 4  DSRTGEYITADRAESGVFIWTVPNPLYFKILKHDSRPFLTNHDIIKVQIQFNHNLRRALG 63

Query: 64 IHKCFITLKIYTRLRPPTGLFLR 87
          +HKCF+T +++T LRPPTG+FLR
Sbjct: 64 LHKCFLTFQVWTGLRPPTGIFLR 86

[Close]
BLAST of Lag0028206 vs. ExPASy TrEMBL
Match: A0A3G2KQ67 (Replication enhancer OS=Tomato leaf curl New Delhi virus OX=223347 GN=AC3 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.1e-28
Identity = 58/83 (69.88%), Postives = 72/83 (86.75%), Query Frame = 0 

Query: 4  DSRTGENITARQLENGVFIWETPNPLYFKIVSHTTRPFQTQHDIIELEIRFNHNLRRALG 63
          DSRTGE ITA + E+GVFIW  PNPLYFKI+ H +RPF T HDII+++I+FNHNLRRALG
Sbjct: 4  DSRTGEYITADRAESGVFIWTVPNPLYFKILKHDSRPFLTNHDIIKVQIQFNHNLRRALG 63

Query: 64 IHKCFITLKIYTRLRPPTGLFLR 87
          +HKCF+T +++T LRPPTG+FLR
Sbjct: 64 LHKCFLTFQVWTGLRPPTGIFLR 86

The following BLAST results are available for this feature:
BLAST of Lag0028206 vs. NCBI nr
Match NameE-valueIdentityDescription
QGR25313.19.9e-2972.29replication enhancer protein [Tomato leaf curl New Delhi virus] >QPL11260.1 AC3 ... [more]
ABB52042.11.3e-2869.77C3 [Tomato leaf curl New Delhi virus [Pakistan:Solanum:1997]][more]
ABB52055.11.3e-2869.77C3 [Tomato leaf curl New Delhi virus [Pakistan:Solanum:1997]][more]
QPN02338.12.2e-2871.08Replication enhancer protein [Tomato leaf curl New Delhi virus][more]
AMB18886.18.4e-2869.88replication enhancer protein [Tomato leaf curl New Delhi virus][more]
BLAST of Lag0028206 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P272658.7e-2861.46Replication enhancer protein OS=Tomato yellow leaf curl virus (strain Israel) OX... [more]
P362819.6e-2765.06Replication enhancer protein OS=Tomato leaf curl virus (strain Australia) OX=223... [more]
Q085906.2e-2663.86Replication enhancer protein OS=Indian cassava mosaic virus OX=31600 GN=AC3 PE=3... [more]
Q9DXE76.2e-2663.86Replication enhancer protein OS=Tomato yellow leaf curl China virus OX=185793 GN... [more]
P149692.0e-2462.65Replication enhancer protein OS=African cassava mosaic virus (isolate Nigerian) ... [more]
BLAST of Lag0028206 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1Z5AZ674.8e-2972.29Replication enhancer OS=Tomato leaf curl New Delhi virus OX=223347 GN=AC3 PE=3 S... [more]
Q0R4Q76.3e-2969.77Replication enhancer OS=Tomato leaf curl New Delhi virus [Pakistan:Solanum:1997]... [more]
Q0R4S06.3e-2969.77Replication enhancer OS=Tomato leaf curl New Delhi virus [Pakistan:Solanum:1997]... [more]
A0A0Y0AIU94.1e-2869.88Replication enhancer OS=Tomato leaf curl New Delhi virus OX=223347 GN=AC3 PE=3 S... [more]
A0A3G2KQ674.1e-2869.88Replication enhancer OS=Tomato leaf curl New Delhi virus OX=223347 GN=AC3 PE=3 S... [more]
BLAST of Lag0028206 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000657Geminivirus AL3 coat proteinPRINTSPR00231GEMCOATAL3coord: 27..44
score: 49.09
coord: 66..82
score: 39.47
coord: 48..66
score: 65.36
coord: 6..21
score: 71.14
IPR000657Geminivirus AL3 coat proteinPFAMPF01407Gemini_AL3coord: 4..82
e-value: 1.0E-25
score: 89.9

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028206.1Lag0028206.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016032 viral process
cellular_component GO:0016021 integral component of membrane