Lag0028155 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAGCAGTGGATGGATAATATTGAAATGGATTAAAGGTTATGGGGTGCCCAGAAGACAAGAAGGTATCATTAGCTACGTATCTCCTACAAGAGCAGCTCGAGATTGGTGGAGGTCAATCTTGAGTAGACGATCAGACACTGAAGGAATGGCTTGGCAAGAGTTTAAGAGGGTCTTTTTCGAAAATACTACCCACGATCTTTTCAGGATGCAAACGCAATGAATTTCTGAGACTTGAGCAGGGATCGATGACAGTGGCTGATATGAGCATAAGTATCTTGAGTTATCCAAGTACGCTACAAATGTGATCAGTGATGAGATCGATAGATGCAAGCAGTTTGAAGACGGTCTTCGAGGTGAAATTCGAACTCATGTTACTGCCAGCATAGAAAGGAAGGAGTTTGGAACATTGGTGGAACTTGCCATGAGGGTAGAAAAAGTCTGATAGACGCGAGAACTCAAAGTGAAGCTTCTATGAGTGCACGAGGTTCAGGGGACAGATCATATAAAGGTGGCAACAAGAGTTTTGTACCAGGAGTCAGGGGCATGGAAGTTTTAAACCGAGGCATCGTGGTTCAGCGAGAACAGATTCCAGTTTCAGCCAGTCTGCTAGTAGTGGATCGGGCCGTCTTCGCGATCCTCTAGCGGTCAGCAAGCATCACAGTCAGGGGAACCAGCATCCAGCCAAAGCAGGGCGTAGCTGGTCAAAATTGTGGCAAGCATCATCAGGGGCAGTGTCTATGGGGAACCCGAGTTTGTTATAA ATGCAGAGCAGTGGATGGATAATATTGAAATGGATTAAAGGTTATGGGGTGCCCAGAAGACAAGAAGGTATCATTAGCTACGTATCTCCTACAAGAGCAGCTCGAGATTGGTGGAGGTCAATCTTGAGTAGACGATCAGACACTGAAGGAATGGCTTGGCAAGAGTTTAAGAGGTACGCTACAAATGTGATCAGTGATGAGATCGATAGATGCAAGCAGTTTGAAGACGGTCTTCGAGGTGAAATTCGAACTCATGTTACTGCCAGCATAGAAAGGAAGGAGTTTGGAACATTGGTGGAACTTGCCATGAGGGGGCATGGAAGTTTTAAACCGAGGCATCGTGGTTCAGCGAGAACAGATTCCAGTTTCAGCCAGTCTGCTAGTAGTGGATCGGGCCGTCTTCGCGATCCTCTAGCGGTCAGCAAGCATCACAGTCAGGGGAACCAGCATCCAGCCAAAGCAGGGCGTAGCTGGTCAAAATTGTGGCAAGCATCATCAGGGGCAGTGTCTATGGGGAACCCGAGTTTGTTATAA ATGCAGAGCAGTGGATGGATAATATTGAAATGGATTAAAGGTTATGGGGTGCCCAGAAGACAAGAAGGTATCATTAGCTACGTATCTCCTACAAGAGCAGCTCGAGATTGGTGGAGGTCAATCTTGAGTAGACGATCAGACACTGAAGGAATGGCTTGGCAAGAGTTTAAGAGGTACGCTACAAATGTGATCAGTGATGAGATCGATAGATGCAAGCAGTTTGAAGACGGTCTTCGAGGTGAAATTCGAACTCATGTTACTGCCAGCATAGAAAGGAAGGAGTTTGGAACATTGGTGGAACTTGCCATGAGGGGGCATGGAAGTTTTAAACCGAGGCATCGTGGTTCAGCGAGAACAGATTCCAGTTTCAGCCAGTCTGCTAGTAGTGGATCGGGCCGTCTTCGCGATCCTCTAGCGGTCAGCAAGCATCACAGTCAGGGGAACCAGCATCCAGCCAAAGCAGGGCGTAGCTGGTCAAAATTGTGGCAAGCATCATCAGGGGCAGTGTCTATGGGGAACCCGAGTTTGTTATAA MQSSGWIILKWIKGYGVPRRQEGIISYVSPTRAARDWWRSILSRRSDTEGMAWQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSFKPRHRGSARTDSSFSQSASSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSKLWQASSGAVSMGNPSLL Homology
BLAST of Lag0028155 vs. NCBI nr
Match: KAA0036813.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 75.1 bits (183), Expect = 6.8e-10 Identity = 54/137 (39.42%), Postives = 75/137 (54.74%), Query Frame = 0
BLAST of Lag0028155 vs. NCBI nr
Match: KAA0035225.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21839.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 71.6 bits (174), Expect = 7.5e-09 Identity = 54/145 (37.24%), Postives = 71/145 (48.97%), Query Frame = 0
BLAST of Lag0028155 vs. NCBI nr
Match: TYK27278.1 (uncharacterized protein E5676_scaffold244G00450 [Cucumis melo var. makuwa]) HSP 1 Score: 68.2 bits (165), Expect = 8.3e-08 Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of Lag0028155 vs. NCBI nr
Match: KAA0026280.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21476.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 68.2 bits (165), Expect = 8.3e-08 Identity = 56/162 (34.57%), Postives = 75/162 (46.30%), Query Frame = 0
BLAST of Lag0028155 vs. NCBI nr
Match: XP_038896366.1 (uncharacterized protein LOC120084630 [Benincasa hispida]) HSP 1 Score: 66.6 bits (161), Expect = 2.4e-07 Identity = 45/159 (28.30%), Postives = 70/159 (44.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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