Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCACAACCGCTCTTCTACAAGCACATTTCTTCAAAATCAATGGCGTTTTCACCACAGATTTTCCAGGAAACCCCCCTCACAAATTCAACTACACAGGCCCCGGACCTAAAAATTTGCAGACGACAAGTGGAACCAAGGTCTACAAATTACAATACAACTCCACAGTGGAATTAGTTCTACAAGATACAGGAATCATAACCCCAGAAAACCATCCCATTCATCTCCACGGATTCAATTTCTTCGAAGTCGGGCGAGGAATCGGCAATTTCAACCCTAAAACAGACCCCAAGAAATTCAATCTCGTGGATCCGGTGGAGAGAAACACAATCGGAGTTCCATCCGGTGGATGGACGGCGATAAGGTTTCGTGCGGACAATCCAGGTAAAAGAATTCGAATCATCTTTCGATTTCTCGATCAAATCTTAAACTATCGAACTGAATTTAAACGATTGAATTGAAAACGAAACTGAAATTGAAGGGTTTTGATTTCGTTTCACCTTGCAGGAGTTTGGTTTATGCATTGCCATTTGGAAATTCATACGACTTGGGGATTGAAGATGGCGTTCTTGGTGGAAAATGGCAAAGGCCCCAAACAGTCGCTGCTACCGCCGCCGAGCGACCTCCCAAAATGTTAA
mRNA sequence
ATGCCCACAACCGCTCTTCTACAAGCACATTTCTTCAAAATCAATGGCGTTTTCACCACAGATTTTCCAGGAAACCCCCCTCACAAATTCAACTACACAGGCCCCGGACCTAAAAATTTGCAGACGACAAGTGGAACCAAGGTCTACAAATTACAATACAACTCCACAGTGGAATTAGTTCTACAAGATACAGGAATCATAACCCCAGAAAACCATCCCATTCATCTCCACGGATTCAATTTCTTCGAAGTCGGGCGAGGAATCGGCAATTTCAACCCTAAAACAGACCCCAAGAAATTCAATCTCGTGGATCCGGTGGAGAGAAACACAATCGGAGTTCCATCCGGTGGATGGACGGCGATAAGGTTTCGTGCGGACAATCCAGGAGTTTGGTTTATGCATTGCCATTTGGAAATTCATACGACTTGGGGATTGAAGATGGCGTTCTTGGTGGAAAATGGCAAAGGCCCCAAACAGTCGCTGCTACCGCCGCCGAGCGACCTCCCAAAATGTTAA
Coding sequence (CDS)
ATGCCCACAACCGCTCTTCTACAAGCACATTTCTTCAAAATCAATGGCGTTTTCACCACAGATTTTCCAGGAAACCCCCCTCACAAATTCAACTACACAGGCCCCGGACCTAAAAATTTGCAGACGACAAGTGGAACCAAGGTCTACAAATTACAATACAACTCCACAGTGGAATTAGTTCTACAAGATACAGGAATCATAACCCCAGAAAACCATCCCATTCATCTCCACGGATTCAATTTCTTCGAAGTCGGGCGAGGAATCGGCAATTTCAACCCTAAAACAGACCCCAAGAAATTCAATCTCGTGGATCCGGTGGAGAGAAACACAATCGGAGTTCCATCCGGTGGATGGACGGCGATAAGGTTTCGTGCGGACAATCCAGGAGTTTGGTTTATGCATTGCCATTTGGAAATTCATACGACTTGGGGATTGAAGATGGCGTTCTTGGTGGAAAATGGCAAAGGCCCCAAACAGTCGCTGCTACCGCCGCCGAGCGACCTCCCAAAATGTTAA
Protein sequence
MPTTALLQAHFFKINGVFTTDFPGNPPHKFNYTGPGPKNLQTTSGTKVYKLQYNSTVELVLQDTGIITPENHPIHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTAIRFRADNPGVWFMHCHLEIHTTWGLKMAFLVENGKGPKQSLLPPPSDLPKC
Homology
BLAST of Lag0027230 vs. NCBI nr
Match:
XP_038904173.1 (laccase-4-like [Benincasa hispida])
HSP 1 Score: 370.2 bits (949), Expect = 9.9e-99
Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 0
Query: 1 MPTTALLQAHFFKINGVFTTDFPGNPPHKFNYTGPGPKNLQTTSGTKVYKLQYNSTVELV 60
MPTTALLQAHFFK GVFTTDFPGNPPHKFNY+GPGPKNLQTTSGTK+YKLQYNSTVELV
Sbjct: 416 MPTTALLQAHFFKTKGVFTTDFPGNPPHKFNYSGPGPKNLQTTSGTKLYKLQYNSTVELV 475
Query: 61 LQDTGIITPENHPIHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA 120
LQDTGIITPENHPIHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA
Sbjct: 476 LQDTGIITPENHPIHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA 535
Query: 121 IRFRADNPGVWFMHCHLEIHTTWGLKMAFLVENGKGPKQSLLPPPSDLPKC 172
IRFRADNPGVWFMHCHLEIHTTWGLKMAFLVENGKGPKQSLLPPPSDLPKC
Sbjct: 536 IRFRADNPGVWFMHCHLEIHTTWGLKMAFLVENGKGPKQSLLPPPSDLPKC 586
BLAST of Lag0027230 vs. NCBI nr
Match:
XP_023539306.1 (laccase-4-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 368.6 bits (945), Expect = 2.9e-98
Identity = 164/171 (95.91%), Postives = 169/171 (98.83%), Query Frame = 0
Query: 1 MPTTALLQAHFFKINGVFTTDFPGNPPHKFNYTGPGPKNLQTTSGTKVYKLQYNSTVELV 60
MPTTALLQAHFFKINGVFTTDFPG PPHKFNYTGPGPKNLQTTSGTK+YKL+YNSTVELV
Sbjct: 387 MPTTALLQAHFFKINGVFTTDFPGKPPHKFNYTGPGPKNLQTTSGTKLYKLKYNSTVELV 446
Query: 61 LQDTGIITPENHPIHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA 120
LQDTGI+TPENHPIHLHGFNFFEVGRG+GNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA
Sbjct: 447 LQDTGIVTPENHPIHLHGFNFFEVGRGVGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA 506
Query: 121 IRFRADNPGVWFMHCHLEIHTTWGLKMAFLVENGKGPKQSLLPPPSDLPKC 172
IRFRADNPGVWFMHCHLEIHTTWGLKMAF+VENGKGPK SLLPPPSDLPKC
Sbjct: 507 IRFRADNPGVWFMHCHLEIHTTWGLKMAFMVENGKGPKHSLLPPPSDLPKC 557
BLAST of Lag0027230 vs. NCBI nr
Match:
XP_022937901.1 (laccase-4-like [Cucurbita moschata])
HSP 1 Score: 367.9 bits (943), Expect = 4.9e-98
Identity = 164/171 (95.91%), Postives = 169/171 (98.83%), Query Frame = 0
Query: 1 MPTTALLQAHFFKINGVFTTDFPGNPPHKFNYTGPGPKNLQTTSGTKVYKLQYNSTVELV 60
MPTTALLQAHFFKINGVFTTDFPG PPHKFNYTGPGPKNLQTTSGTK+YKL+YNSTVELV
Sbjct: 407 MPTTALLQAHFFKINGVFTTDFPGKPPHKFNYTGPGPKNLQTTSGTKLYKLKYNSTVELV 466
Query: 61 LQDTGIITPENHPIHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA 120
LQDTGI+TPENHPIHLHGFNFFEVGRG+GNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA
Sbjct: 467 LQDTGIVTPENHPIHLHGFNFFEVGRGVGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA 526
Query: 121 IRFRADNPGVWFMHCHLEIHTTWGLKMAFLVENGKGPKQSLLPPPSDLPKC 172
IRFRADNPGVWFMHCHLEIHTTWGLKMAF+VENGKGPKQSL PPPSDLPKC
Sbjct: 527 IRFRADNPGVWFMHCHLEIHTTWGLKMAFMVENGKGPKQSLPPPPSDLPKC 577
BLAST of Lag0027230 vs. NCBI nr
Match:
XP_022971405.1 (laccase-4-like [Cucurbita maxima])
HSP 1 Score: 367.5 bits (942), Expect = 6.4e-98
Identity = 164/171 (95.91%), Postives = 169/171 (98.83%), Query Frame = 0
Query: 1 MPTTALLQAHFFKINGVFTTDFPGNPPHKFNYTGPGPKNLQTTSGTKVYKLQYNSTVELV 60
MPTTALLQAHFFKINGVFTTDFPG PPHKFNYTG GPKNLQTTSGTK+YKL+YNSTVELV
Sbjct: 427 MPTTALLQAHFFKINGVFTTDFPGKPPHKFNYTGAGPKNLQTTSGTKLYKLKYNSTVELV 486
Query: 61 LQDTGIITPENHPIHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA 120
LQDTGI+TPENHPIHLHGFNFFEVGRG+GNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA
Sbjct: 487 LQDTGIVTPENHPIHLHGFNFFEVGRGVGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA 546
Query: 121 IRFRADNPGVWFMHCHLEIHTTWGLKMAFLVENGKGPKQSLLPPPSDLPKC 172
IRFRADNPGVWFMHCHLEIHTTWGLKMAF+VENGKGPKQSLLPPPSDLPKC
Sbjct: 547 IRFRADNPGVWFMHCHLEIHTTWGLKMAFMVENGKGPKQSLLPPPSDLPKC 597
BLAST of Lag0027230 vs. NCBI nr
Match:
XP_022145678.1 (laccase-4-like [Momordica charantia])
HSP 1 Score: 363.6 bits (932), Expect = 9.2e-97
Identity = 162/171 (94.74%), Postives = 169/171 (98.83%), Query Frame = 0
Query: 1 MPTTALLQAHFFKINGVFTTDFPGNPPHKFNYTGPGPKNLQTTSGTKVYKLQYNSTVELV 60
MPTTALLQAHFFKI+GVFTTDFPGNPPHKFNY+GPGP+NLQTTSGTK+YKLQYNSTVELV
Sbjct: 390 MPTTALLQAHFFKISGVFTTDFPGNPPHKFNYSGPGPRNLQTTSGTKLYKLQYNSTVELV 449
Query: 61 LQDTGIITPENHPIHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA 120
LQDTGIIT ENHP+HLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA
Sbjct: 450 LQDTGIITAENHPVHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA 509
Query: 121 IRFRADNPGVWFMHCHLEIHTTWGLKMAFLVENGKGPKQSLLPPPSDLPKC 172
IRFRADNPGVWFMHCHLE+HTTWGLKMAFLV+NGKGPKQSL PPPSDLPKC
Sbjct: 510 IRFRADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPKQSLPPPPSDLPKC 560
BLAST of Lag0027230 vs. ExPASy Swiss-Prot
Match:
O80434 (Laccase-4 OS=Arabidopsis thaliana OX=3702 GN=IRX12 PE=2 SV=2)
HSP 1 Score: 312.0 bits (798), Expect = 4.2e-84
Identity = 135/171 (78.95%), Postives = 149/171 (87.13%), Query Frame = 0
Query: 1 MPTTALLQAHFFKINGVFTTDFPGNPPHKFNYTGPGPKNLQTTSGTKVYKLQYNSTVELV 60
MP TALL AH+F +GVFTTDFP NPPH FNY+G N+ T +GT++YKL YN+TV+LV
Sbjct: 388 MPKTALLPAHYFNTSGVFTTDFPKNPPHVFNYSGGSVTNMATETGTRLYKLPYNATVQLV 447
Query: 61 LQDTGIITPENHPIHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA 120
LQDTG+I PENHP+HLHGFNFFEVGRG+GNFN DPK FNLVDPVERNTIGVPSGGW
Sbjct: 448 LQDTGVIAPENHPVHLHGFNFFEVGRGLGNFNSTKDPKNFNLVDPVERNTIGVPSGGWVV 507
Query: 121 IRFRADNPGVWFMHCHLEIHTTWGLKMAFLVENGKGPKQSLLPPPSDLPKC 172
IRFRADNPGVWFMHCHLE+HTTWGLKMAFLVENGKGP QS+LPPP DLPKC
Sbjct: 508 IRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSILPPPKDLPKC 558
BLAST of Lag0027230 vs. ExPASy Swiss-Prot
Match:
Q0IQU1 (Laccase-22 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC22 PE=2 SV=2)
HSP 1 Score: 302.0 bits (772), Expect = 4.3e-81
Identity = 124/171 (72.51%), Postives = 153/171 (89.47%), Query Frame = 0
Query: 1 MPTTALLQAHFFKINGVFTTDFPGNPPHKFNYTGPGPKNLQTTSGTKVYKLQYNSTVELV 60
MP+T +LQAH++ I GVFT DFP P HKFNYTG GPKNLQT +GT+VY+L YN++V++V
Sbjct: 394 MPSTPILQAHYYNIPGVFTEDFPATPLHKFNYTGSGPKNLQTMNGTRVYRLPYNASVQVV 453
Query: 61 LQDTGIITPENHPIHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA 120
LQDTGII+PE+HPIHLHGFNFF VG+G+GN+NP+T P FNL+DP+ERNTIGVP+GGWTA
Sbjct: 454 LQDTGIISPESHPIHLHGFNFFVVGKGVGNYNPRTSPSTFNLIDPIERNTIGVPTGGWTA 513
Query: 121 IRFRADNPGVWFMHCHLEIHTTWGLKMAFLVENGKGPKQSLLPPPSDLPKC 172
IRFR+DNPGVWFMHCH E+HT+WGLKMAF+V+NGK P ++L+PPP DLP+C
Sbjct: 514 IRFRSDNPGVWFMHCHFEVHTSWGLKMAFVVDNGKRPSETLIPPPKDLPQC 564
BLAST of Lag0027230 vs. ExPASy Swiss-Prot
Match:
Q6ID18 (Laccase-10 OS=Arabidopsis thaliana OX=3702 GN=LAC10 PE=2 SV=1)
HSP 1 Score: 295.8 bits (756), Expect = 3.1e-79
Identity = 129/171 (75.44%), Postives = 143/171 (83.63%), Query Frame = 0
Query: 1 MPTTALLQAHFFKINGVFTTDFPGNPPHKFNYTGPGPKNLQTTSGTKVYKLQYNSTVELV 60
MP TALLQAH+F + G++TTDFP P F++TG P NL T TK+YKL YNSTV++V
Sbjct: 388 MPKTALLQAHYFNLTGIYTTDFPAKPRRVFDFTGKPPSNLATMKATKLYKLPYNSTVQVV 447
Query: 61 LQDTGIITPENHPIHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWTA 120
LQDTG + PENHPIHLHGFNFF VG G GN+N K D KFNLVDPVERNT+GVPSGGW A
Sbjct: 448 LQDTGNVAPENHPIHLHGFNFFVVGLGTGNYNSKKDSNKFNLVDPVERNTVGVPSGGWAA 507
Query: 121 IRFRADNPGVWFMHCHLEIHTTWGLKMAFLVENGKGPKQSLLPPPSDLPKC 172
IRFRADNPGVWFMHCHLE+HTTWGLKMAFLVENGKGP QS+ PPPSDLPKC
Sbjct: 508 IRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSIRPPPSDLPKC 558
BLAST of Lag0027230 vs. ExPASy Swiss-Prot
Match:
Q1PDH6 (Laccase-16 OS=Arabidopsis thaliana OX=3702 GN=LAC16 PE=2 SV=2)
HSP 1 Score: 286.6 bits (732), Expect = 1.9e-76
Identity = 126/173 (72.83%), Postives = 146/173 (84.39%), Query Frame = 0
Query: 1 MPTTALLQAHFFKINGVFTTDFPGNPPHKFNYTGPGP--KNLQTTSGTKVYKLQYNSTVE 60
MP TALLQAHFF I+GVFT DFP P + ++YT P N T GTK+Y+L YN+TV+
Sbjct: 394 MPKTALLQAHFFNISGVFTDDFPAKPSNPYDYTAPVKLGVNAATMKGTKLYRLPYNATVQ 453
Query: 61 LVLQDTGIITPENHPIHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGW 120
+VLQ+T +I +NHP HLHGFNFFEVGRG+GNFNP+ DPK FNLVDPVERNT+GVP+GGW
Sbjct: 454 IVLQNTAMILSDNHPFHLHGFNFFEVGRGLGNFNPEKDPKAFNLVDPVERNTVGVPAGGW 513
Query: 121 TAIRFRADNPGVWFMHCHLEIHTTWGLKMAFLVENGKGPKQSLLPPPSDLPKC 172
TAIRF ADNPGVWFMHCHLE+HTTWGLKMAF+V+NG GP QSLLPPP+DLPKC
Sbjct: 514 TAIRFIADNPGVWFMHCHLELHTTWGLKMAFVVDNGHGPDQSLLPPPADLPKC 566
BLAST of Lag0027230 vs. ExPASy Swiss-Prot
Match:
Q8RYM9 (Laccase-2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC2 PE=2 SV=1)
HSP 1 Score: 274.6 bits (701), Expect = 7.4e-73
Identity = 119/172 (69.19%), Postives = 143/172 (83.14%), Query Frame = 0
Query: 1 MPTTALLQAHFFKINGVFTTDFPGNPPHKFNYTG-PGPKNLQTTSGTKVYKLQYNSTVEL 60
MP TALLQAH++ GVF DFP PP +FNYTG P L T+ GT++ K+ YN+TVEL
Sbjct: 391 MPRTALLQAHYYGQKGVFAADFPDRPPARFNYTGVPLTAGLGTSLGTRLSKIAYNATVEL 450
Query: 61 VLQDTGIITPENHPIHLHGFNFFEVGRGIGNFNPKTDPKKFNLVDPVERNTIGVPSGGWT 120
VLQDT +++ E+HP HLHG+NFF VGRG+GNF+P DP K+NLVDP ERNT+GVP+GGWT
Sbjct: 451 VLQDTNLLSVESHPFHLHGYNFFVVGRGVGNFDPAKDPAKYNLVDPPERNTVGVPAGGWT 510
Query: 121 AIRFRADNPGVWFMHCHLEIHTTWGLKMAFLVENGKGPKQSLLPPPSDLPKC 172
AIRFRADNPGVWF+HCHLE+HT+WGLKMAFLVE+G GP +S+LPPP DLPKC
Sbjct: 511 AIRFRADNPGVWFLHCHLEVHTSWGLKMAFLVEDGSGPDESVLPPPKDLPKC 562
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O80434 | 4.2e-84 | 78.95 | Laccase-4 OS=Arabidopsis thaliana OX=3702 GN=IRX12 PE=2 SV=2 | [more] |
Q0IQU1 | 4.3e-81 | 72.51 | Laccase-22 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC22 PE=2 SV=2 | [more] |
Q6ID18 | 3.1e-79 | 75.44 | Laccase-10 OS=Arabidopsis thaliana OX=3702 GN=LAC10 PE=2 SV=1 | [more] |
Q1PDH6 | 1.9e-76 | 72.83 | Laccase-16 OS=Arabidopsis thaliana OX=3702 GN=LAC16 PE=2 SV=2 | [more] |
Q8RYM9 | 7.4e-73 | 69.19 | Laccase-2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC2 PE=2 SV=1 | [more] |