Lag0025335 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0025335
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionhelicase and polymerase-containing protein TEBICHI isoform X1
Locationchr10: 11534628 .. 11539895 (-)
RNA-Seq ExpressionLag0025335
SyntenyLag0025335
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGGGGAAGACGTGGCCTGCAAGACAGTAAACCTGCACACCGGTGTGGTGCTCGCCACACCGGCTCCGATGCTTAAGTCAGCAAGCAGAACGGTAGGGCGTGGAAAAGTAAGAGCAAGAGGAGAAAGCAGAGAATAGAGAGTAGAATTTAGGGATAGAATTCGGGATCCCCTCTTCAGTGGCGAAGAGAGATATAAATACATGTTCATCCTCCTAGCCTTTTTAGGGTTTCGGAGGCGTTTTAGGTCAAACCAGGCGAAACCGGGGCATCCAGAGGCGGTGGGGACCAGACGAGACCGAACGGGCTCGGCCCGCGCGAGCGGGCCGAGGCCGACCATGTGCTCGGCCTCGGCCATGGGCCGAGGCCGAGCAGGGGGTCGGGCCTAAAACCCGACCCCTTCGGTCTTGGCCCGTCTCACTTGCCGGTTTTGTCCCCTTGGTCCATCTCTCAGCCCGATTCCTCCCCGGTTGTCCTCGTCAACTCCTTGTATATCGGGGTGGTCCAAAATTGCCTATAACATTGTCGATAAATGAATTACATTTCACGTATCAAATAACATCTAAATGGTATGTCTACTATTGACATATTCAAATATATTAATAAACAATATAATTTAAAGAACATCACTTTGTTTTACAAAAACAATCTAATCAAGAACTTTTATTACATTAAGGACAATCAAGAAATTAAAAAGCATGTGACCAAAGTTGAAAATTACCTAAAAGACCAAAGACTATTTTTGGCCTAAATAATTTTTAAGAAGAATAAACTAATTAACTTTTATATTTTTAGCATGAAAATTTTAGTTTGGGGTATAAAAACTTGACAACCACATACTTCAAAATAGTAATAACCATCAAAGCCACCCAACCCAACCAAACCTTCATGCTTATTATGTTTGTTTGGTTTACCTTAGTGCAATTTATATTTATATATGTGGTAATTGATATTGTAATAATGTTGAGTTAACACATGGAAAAGATGCTTATGATTTCAATTGCCTTACTTTTCAAACATATTTAGTTATTTTTTTTTGTAAATATATATGCAAGTTAAATTTGATATTTCATTTATAAATTTAATACATGCAAGTTAAATTTGTTGTTTGTTATAGGTAATTTTGGACCACCACAGCGTACGAGGAGCTGACGGGACAACCGGGAGGAGATAGGACCAGGAAAGGGACCCAGAGGGAGACCATACCGACGGGCTGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCTTGGGCCGAGGCCGACCACTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTACCGCTTCCAGCTGCCTCGGTCCAGCCTGCTTCGTCCCAGAACGCCTCCAAACCCTAGGAGTCCGAGCAGGTATTTATACCCCTCTTCGCCATCGAAGAAGGGGGCCGAAAACTCGATTCTTGACTTCTTTCTCTATTCTCTAGCTGCTCAGTTTCCTGACTTAGGCATCGGAGGCGGTGTGGCCTACACCACACCGGTGTCCAGCGATTCTTGCTGGTTTTGCAGGTCACGTCTTCCCCAGCTTCTACAAATTCATTGTTGGTGTCACGTGAAGGGCAGGTGGATTGCTTGGCCAAATTTTGGCATCAACATTGTTATTACTCAATTGAGTTATGATTTGACATATATATCAATGTTTATTTTATATATATATTTTTTATTCATCTTGTTTTTCAGAGTTACTAAGTTGTTAGTCTATAAATAACAACTTGTTGTTTCATTTGAATCATCTCATTCCATTTGAAGTATTACTCAATTATTATATAAACATACTTCCAATAATGATTATAAAAAACCCTCACACTAACGCTACAAATCGATTCCAAATAGTTGAATAAAAACTAAACTTCCAAACACACCACAACTTGGTAGTTTATGATAAACAACCAAATAAACCCTTCAACCTGACAAAGAAAGATTGCCAATATAGTTGGTAATTCTCTCAAAACAACACCTATGACAAAGAAAGATTGCCAAGGTAATTCTCTCAAAACAACACCTACTACTGCACACGAAAATTTCTGAAAACTAAATCATTGCAAACTTATTAACCCAATGGTAGGACCACTTAACCTTAAAATTTTCTTTAACTAACATCATTAAGTCAACTAAGCCGATAAACTCTTGGACACAATATTTAACTACGTACAAATGTATAGGTATTGTTATAGGTAATTTTGGATCACTCCGAAACACAAGGAGCTAACGAGGACAACCGAGTAGAGATAGGGCCAGAAACCAACCCAGAGGAAGACCAGACCAAGGGGTCGGGCCATGGTAGGCCGAGGTCGTGCTCGTCCGCCTCCTTTCGGTCCCTGCTGCCTCTGGTCGCCCCGATTTCACTTGGTTCATCCCGAAACGTCTTTGGATTCCTAAAAACCCTAGGAGCATGAGCAGGTATTTAAACCCCTCTTCGTTCCTGAGGATCCCGAACTCTATTTTCGACTCTCTCTTCTTGCTCTCTTGCTCCCCTCCCTCAGCTTTCTGACTTAAGCATCGAAGGCGGTGTCGCAAGCACCACACCGGTGTGCAGGTTTTCTATCTTCACTACTACAAAAACAGCCTTTAATGACGGACAGAAAAAAGGGGGCGGAACTTTTAATGACGGACGGAAAACGCGCGCCACTTTTAATGTCGGACGCGCGTTTTTCCGGAAAAACTTACTTTTAATGACGGGCATTGCCCGTCATTAAAGTAACCTTTAATGGCGGGCATAGCCCGCCATTAAAAGCTCGTTTTAATTTTTTTTAAACGGTAAAAAGAAAACATTGCTTTTCTCTCTCCTCGAAGGCCCACATCCTAACCCTAGCTCTTCTTCTACCTTCAGGTGCCGCAACTCTCCCCTTCTTCAACTTTCGGCACCTTCTGGTCCTCCGCCCCACTCTCTCTTCGACTGGCATACCCACATTTCTTCCCATTACAATACGTTCTCCACAGCGGCTTTTCCAGCAGCTTGCAATTCTTCTTCTTCTCCGGTTTCTTCTCGCATTCCAGCGCGATCCGGACCAACCCGGATGCCATTTCTCGCACCAGAACGCTCGTCGACGTCGAGAGCTCGATCAAAAACGTCGGATTCTGTTTTGGGTCCTCCTGTAATGCGAAATAGACGTGCCCTCGTCGGTACCCGAATAGCGTCCCGACAACCCGGCCGCCCAGCCGGGAGCGGTGCGGTGTCGGCCGGATCCGGCCGATGGCTGTGAGAGCGGTTCGAAGCTTGGAAACCGGACGGTTGGATGAGGATGAAGATTTGTTGTGTTGTGGGTTGTGGGTTTTGTTGTTGAGGTGGTCTTGTTTGTCCTCTTGAGTGAAACGAGAGGAAAGACTACTCGCCTTTGCTTATTTATTTTTCTGTTCCTTTGTAACTCTAAAGTCTACTCAGCAGCAGTGTGATGTTATTTACTTCTTTCAGGGTTTTCGAGCCAGAGCCCTCTACAAAGCTAGTTTGCGGACACCTTTAGCAATTGCAGAAGCATCCGATGCTGAAATAGTTAAAGCTCTTTTTGAGTCTGCATCATGGACTGCAGAAGGTGAGCTTAACTGAGACACAATTATTTGTTTGTGCTGATTCTGTTCAGCAGGTTAAGTTATCCTTGACATCACACAATTTCTTTGCCCAAGGAGTATGTTCAAATTTTGTTGTTGATTTTGATGGGAGGGTTTAATGGTTGTATGATGCAATCTAGTATCAAGGAGAGTATTCTTTTGACCAAAGTCTTAACTACTACTAAAAAATATGTAAGAGATTGACCCTCTATTTATAGAGGATGTGAGCATACTAAGTAAAATAACTAATTGACCAACAAACCAAGACCAACAATGACAACAAACTCAAATCAAAATTACAAATTAACTTCTCATTACAGAACACTAGCCTTCCTCTCTTTGAACTTGGGCTATGGAGGTTGGAATTGAGTAATGGTCATAGTTGTTCTCAACCCATTACTAACTAGTTATGATATGATCTTTGAAATATTGTCTTTCAACCCATGTTGTGAAACATCCAATATTTTTTCTGATAGAAAACAAAAGTATATTAAATAAAAAGATTATATAGCAGCATGAAGATATGGGGAATTACATGACCAGAAGGAACTCCATGTAATACATAAGGTAAGCCCAAAAGCTAGATCTTTTACATTCTTCGCCCACCAAATGTGAAAAAATTCACCCTATCTGAATCAACAGTCTGCGCTGCAATCAAGTAGACAATGAGCTCCATGAACCACATATTTAAATATGCATACATTCTTGTGATACTCTAATGCTTTTGCACTAAGTTGTAGTGATTATTTGTTGAGTCATAAGGATTGGGTAATGTGGATTCATTTTCTATTCTCTTACTTTTCATTTATTTTCAGATTCAAACTGACTTTATTATTAGAGATGAATGATTTCTGGTTACTGCTACAATCGGTAGTTATCTTTCTCCACTTTCAAAATTCTAATCTTGAGGTTGATTTTATAGAGAGTACAGCACAAAAACGCATGCATGTTGGAATAGCAAGGAAGATTAAGCATGGTGCTCGTAAAGTCGTTCTTGATAAAGCTGAAGAGGCAAGGATTGCTGCATTCTCAGCATTTAAATCATTGGGGTTTATTGTGCCACAAATTTCTCGTCCCTTGTCAGCAAGTGCAGGTGGCAATATAACAGCACAAGTGGCTGCAAGTATTCCCTCTGAGATTGTTAATTTTAATCCAATCCAAGTAATTCCATCGGCCTTTACAAGTACTCATCTCTGGTCATAAGGTAAGAGAAATTTTCCTTGATGACCATAGCCAAGTAACAGATATCTGCCTATTTTGCATTTTCCGGAAGAATTAATGTGTCACTGTTGGGTTTTATGCCCTAAAACTCGTAGGTAGTGAATGGTGACAAATTGTTCACTTGTATCAATACGTTGCTATTGAGGTTTGTACAATAAAGAGTTATTGTTACTAAAATTGCACAATTTGACCCAAATCCAATAAACTAAGATCCTAGGTTGTTTAGATGAAACTTGAACTAGTATGTGGGGACATACGGGGATCAGCGTTCAAGTAACAACTTAAATGGTCTATAGTATAGGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATACAGCCCACTTTGTATTCGATACAGATGCAATGATCCAAAGCATCCATGTAGGAGACATGCGAGTGGGGGTATCCTGTGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTAACCACTAG

mRNA sequence

ATGAGGGGGGAAGACGTGGCCTGCAAGACAGTAAACCTGCACACCGGTGTGGTGCTCGCCACACCGGCTCCGATGCTTAAGTCAGCAAGCAGAACGGTAGGGCGTGGAAAAGTCAAACCAGGCGAAACCGGGGCATCCAGAGGCGGTGGGGACCAGACGAGACCGAACGGGCTCGGCCCGCGCGAGCGGGCCGAGGCCGACCATGTGCTCGGCCTCGGCCATGGGCCGAGGCCGAGCAGGGGGTCGGGCCTAAAACCCGACCCCTTCGGTCTTGGCCCGTCTCACTTGCCGGTTTTGTCCCCTTGGTCCATCTCTCAGCCCGATTCCTCCCCGGTTGTCCTCGTCAACTCCTTGTATATCGGGGTGGACCAGGAAAGGGACCCAGAGGGAGACCATACCGACGGGCTGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCTTGGGCCGAGGCCGACCACTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTACCGCTTCCAGCTGCCTCGGTCCAGCCTGCTTCGTCCCAGAACGCCTCCAAACCCTAGGAGTCCGAGCAGGCATCGGAGGCGGTGTGGCCTACACCACACCGGTGTCCAGCGATTCTTGCTGGTTTTGCAGGTCACGTCTTCCCCAGCTTCTACAAATTCATTGTTGGTGTCACGTGAAGGGCAGGTAATTTTGGATCACTCCGAAACACAAGGAGCTAACGAGGACAACCGAGTAGAGATAGGGCCAGAAACCAACCCAGAGGAAGACCAGACCAAGGGGTCGGGCCATGGTAGGCCGAGGTCGTGCTCGTCCGCCTCCTTTCGGTCCCTGCTGCCTCTGGTCGCCCCGATTTCACTTGGTTCATCCCGAAACCTTTCTGACTTAAGCATCGAAGGCGGTGTCGCAAGCACCACACCGGTGTGCAGGTGCCGCAACTCTCCCCTTCTTCAACTTTCGGCACCTTCTGGTCCTCCGCCCCACTCTCTCTTCGACTGGCATACCCACATTTCTTCCCATTACAATACGTTCTCCACAGCGGCTTTTCCAGCAGCTTGCAATTCTTCTTCTTCTCCGGTTTCTTCTCGCATTCCAGCGCGATCCGGACCAACCCGGATGCCATTTCTCGCACCAGAACGCTCGTCGACGTCGAGAGCTCGATCAAAAACGTCGGATTCTGTTTTGGGTCCTCCTGTAATGCGAAATAGACGTGCCCTCGTCGGTACCCGAATAGCGTCCCGACAACCCGGCCGCCCAGCCGGGAGCGGTGCGGTGTCGGCCGGATCCGGCCGATGGCTAGCCCTCTACAAAGCTAGTTTGCGGACACCTTTAGCAATTGCAGAAGCATCCGATGCTGAAATAGTTAAAGCTCTTTTTGAGTCTGCATCATGGACTGCAGAAGAGAGTACAGCACAAAAACGCATGCATGTTGGAATAGCAAGGAAGATTAAGCATGGTGCTCGTAAAGTCGTTCTTGATAAAGCTGAAGAGGCAAGGATTGCTGCATTCTCAGCATTTAAATCATTGGGGTTTATTGTGCCACAAATTTCTCGTCCCTTGTCAGCAAGTGCAGGTGGCAATATAACAGCACAAGTGGCTGCAAGTATTCCCTCTGAGATTGTTAATTTTAATCCAATCCAAGTAGTGAATGGTGACAAATTGTTCACTTGTATCAATACGTTGCTATTGAGGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATACAGCCCACTTTGTATTCGATACAGATGCAATGATCCAAAGCATCCATGTAGGAGACATGCGAGTGGGGGTATCCTGTGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTAACCACTAG

Coding sequence (CDS)

ATGAGGGGGGAAGACGTGGCCTGCAAGACAGTAAACCTGCACACCGGTGTGGTGCTCGCCACACCGGCTCCGATGCTTAAGTCAGCAAGCAGAACGGTAGGGCGTGGAAAAGTCAAACCAGGCGAAACCGGGGCATCCAGAGGCGGTGGGGACCAGACGAGACCGAACGGGCTCGGCCCGCGCGAGCGGGCCGAGGCCGACCATGTGCTCGGCCTCGGCCATGGGCCGAGGCCGAGCAGGGGGTCGGGCCTAAAACCCGACCCCTTCGGTCTTGGCCCGTCTCACTTGCCGGTTTTGTCCCCTTGGTCCATCTCTCAGCCCGATTCCTCCCCGGTTGTCCTCGTCAACTCCTTGTATATCGGGGTGGACCAGGAAAGGGACCCAGAGGGAGACCATACCGACGGGCTGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCTTGGGCCGAGGCCGACCACTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTACCGCTTCCAGCTGCCTCGGTCCAGCCTGCTTCGTCCCAGAACGCCTCCAAACCCTAGGAGTCCGAGCAGGCATCGGAGGCGGTGTGGCCTACACCACACCGGTGTCCAGCGATTCTTGCTGGTTTTGCAGGTCACGTCTTCCCCAGCTTCTACAAATTCATTGTTGGTGTCACGTGAAGGGCAGGTAATTTTGGATCACTCCGAAACACAAGGAGCTAACGAGGACAACCGAGTAGAGATAGGGCCAGAAACCAACCCAGAGGAAGACCAGACCAAGGGGTCGGGCCATGGTAGGCCGAGGTCGTGCTCGTCCGCCTCCTTTCGGTCCCTGCTGCCTCTGGTCGCCCCGATTTCACTTGGTTCATCCCGAAACCTTTCTGACTTAAGCATCGAAGGCGGTGTCGCAAGCACCACACCGGTGTGCAGGTGCCGCAACTCTCCCCTTCTTCAACTTTCGGCACCTTCTGGTCCTCCGCCCCACTCTCTCTTCGACTGGCATACCCACATTTCTTCCCATTACAATACGTTCTCCACAGCGGCTTTTCCAGCAGCTTGCAATTCTTCTTCTTCTCCGGTTTCTTCTCGCATTCCAGCGCGATCCGGACCAACCCGGATGCCATTTCTCGCACCAGAACGCTCGTCGACGTCGAGAGCTCGATCAAAAACGTCGGATTCTGTTTTGGGTCCTCCTGTAATGCGAAATAGACGTGCCCTCGTCGGTACCCGAATAGCGTCCCGACAACCCGGCCGCCCAGCCGGGAGCGGTGCGGTGTCGGCCGGATCCGGCCGATGGCTAGCCCTCTACAAAGCTAGTTTGCGGACACCTTTAGCAATTGCAGAAGCATCCGATGCTGAAATAGTTAAAGCTCTTTTTGAGTCTGCATCATGGACTGCAGAAGAGAGTACAGCACAAAAACGCATGCATGTTGGAATAGCAAGGAAGATTAAGCATGGTGCTCGTAAAGTCGTTCTTGATAAAGCTGAAGAGGCAAGGATTGCTGCATTCTCAGCATTTAAATCATTGGGGTTTATTGTGCCACAAATTTCTCGTCCCTTGTCAGCAAGTGCAGGTGGCAATATAACAGCACAAGTGGCTGCAAGTATTCCCTCTGAGATTGTTAATTTTAATCCAATCCAAGTAGTGAATGGTGACAAATTGTTCACTTGTATCAATACGTTGCTATTGAGGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATACAGCCCACTTTGTATTCGATACAGATGCAATGATCCAAAGCATCCATGTAGGAGACATGCGAGTGGGGGTATCCTGTGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTAACCACTAG

Protein sequence

MRGEDVACKTVNLHTGVVLATPAPMLKSASRTVGRGKVKPGETGASRGGGDQTRPNGLGPRERAEADHVLGLGHGPRPSRGSGLKPDPFGLGPSHLPVLSPWSISQPDSSPVVLVNSLYIGVDQERDPEGDHTDGLGQRGPTRTVGLGLGPRPTTRPVCAGRVRLPPLGPYRFQLPRSSLLRPRTPPNPRSPSRHRRRCGLHHTGVQRFLLVLQVTSSPASTNSLLVSREGQVILDHSETQGANEDNRVEIGPETNPEEDQTKGSGHGRPRSCSSASFRSLLPLVAPISLGSSRNLSDLSIEGGVASTTPVCRCRNSPLLQLSAPSGPPPHSLFDWHTHISSHYNTFSTAAFPAACNSSSSPVSSRIPARSGPTRMPFLAPERSSTSRARSKTSDSVLGPPVMRNRRALVGTRIASRQPGRPAGSGAVSAGSGRWLALYKASLRTPLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLDKAEEARIAAFSAFKSLGFIVPQISRPLSASAGGNITAQVAASIPSEIVNFNPIQVVNGDKLFTCINTLLLRDKAGYLILVTLCDTAHFVFDTDAMIQSIHVGDMRVGVSCAMSLHKTGPRNSNH
Homology
[Close]
BLAST of Lag0025335 vs. NCBI nr
Match: XP_038885698.1 (helicase and polymerase-containing protein TEBICHI isoform X1 [Benincasa hispida] >XP_038885699.1 helicase and polymerase-containing protein TEBICHI isoform X1 [Benincasa hispida] >XP_038885700.1 helicase and polymerase-containing protein TEBICHI isoform X1 [Benincasa hispida] >XP_038885701.1 helicase and polymerase-containing protein TEBICHI isoform X1 [Benincasa hispida])

HSP 1 Score: 191.4 bits (485), Expect = 2.3e-44
Identity = 103/113 (91.15%), Postives = 106/113 (93.81%), Query Frame = 0 

Query: 437  ALYKASLRTPLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLD 496
            ALYKA LRTPLAIAEASDAE+VKALFESASWTAEESTAQKRMHVG+ARKIKHGARKVVLD
Sbjct: 1241 ALYKAGLRTPLAIAEASDAELVKALFESASWTAEESTAQKRMHVGLARKIKHGARKVVLD 1300

Query: 497  KAEEARIAAFSAFKSLGFIVPQISRPLSASAGGNITAQVAASIPSEIVNFNPI 550
            KAEEARIAAFSAFKSLGFIVPQISRPLSASA GNITAQ AAS PSEI  FN +
Sbjct: 1301 KAEEARIAAFSAFKSLGFIVPQISRPLSASADGNITAQAAASFPSEIDTFNRV 1353

[Close]
BLAST of Lag0025335 vs. NCBI nr
Match: XP_038885703.1 (helicase and polymerase-containing protein TEBICHI isoform X3 [Benincasa hispida])

HSP 1 Score: 191.4 bits (485), Expect = 2.3e-44
Identity = 103/113 (91.15%), Postives = 106/113 (93.81%), Query Frame = 0 

Query: 437  ALYKASLRTPLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLD 496
            ALYKA LRTPLAIAEASDAE+VKALFESASWTAEESTAQKRMHVG+ARKIKHGARKVVLD
Sbjct: 1014 ALYKAGLRTPLAIAEASDAELVKALFESASWTAEESTAQKRMHVGLARKIKHGARKVVLD 1073

Query: 497  KAEEARIAAFSAFKSLGFIVPQISRPLSASAGGNITAQVAASIPSEIVNFNPI 550
            KAEEARIAAFSAFKSLGFIVPQISRPLSASA GNITAQ AAS PSEI  FN +
Sbjct: 1074 KAEEARIAAFSAFKSLGFIVPQISRPLSASADGNITAQAAASFPSEIDTFNRV 1126

[Close]
BLAST of Lag0025335 vs. NCBI nr
Match: XP_038885702.1 (helicase and polymerase-containing protein TEBICHI isoform X2 [Benincasa hispida])

HSP 1 Score: 191.4 bits (485), Expect = 2.3e-44
Identity = 103/113 (91.15%), Postives = 106/113 (93.81%), Query Frame = 0 

Query: 437  ALYKASLRTPLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLD 496
            ALYKA LRTPLAIAEASDAE+VKALFESASWTAEESTAQKRMHVG+ARKIKHGARKVVLD
Sbjct: 1241 ALYKAGLRTPLAIAEASDAELVKALFESASWTAEESTAQKRMHVGLARKIKHGARKVVLD 1300

Query: 497  KAEEARIAAFSAFKSLGFIVPQISRPLSASAGGNITAQVAASIPSEIVNFNPI 550
            KAEEARIAAFSAFKSLGFIVPQISRPLSASA GNITAQ AAS PSEI  FN +
Sbjct: 1301 KAEEARIAAFSAFKSLGFIVPQISRPLSASADGNITAQAAASFPSEIDTFNRV 1353

[Close]
BLAST of Lag0025335 vs. NCBI nr
Match: XP_022131666.1 (helicase and polymerase-containing protein TEBICHI isoform X2 [Momordica charantia])

HSP 1 Score: 187.2 bits (474), Expect = 4.3e-43
Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0 

Query: 437  ALYKASLRTPLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLD 496
            ALYKA LRTPLAIAEASDAE++KALFESASWTAEESTAQ+RMHVGIARKIKHGARKVVLD
Sbjct: 1239 ALYKAGLRTPLAIAEASDAEVIKALFESASWTAEESTAQRRMHVGIARKIKHGARKVVLD 1298

Query: 497  KAEEARIAAFSAFKSLGFIVPQISRPLSASAGGNITAQVAASIPSEIVNFNPI 550
            KAEEARIAAFSAFKSLG IVPQISRPLS SA GNITAQVAASIPSEI   N +
Sbjct: 1299 KAEEARIAAFSAFKSLGLIVPQISRPLSVSADGNITAQVAASIPSEIDTSNRV 1351

[Close]
BLAST of Lag0025335 vs. NCBI nr
Match: XP_022131670.1 (helicase and polymerase-containing protein TEBICHI isoform X6 [Momordica charantia])

HSP 1 Score: 187.2 bits (474), Expect = 4.3e-43
Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0 

Query: 437  ALYKASLRTPLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLD 496
            ALYKA LRTPLAIAEASDAE++KALFESASWTAEESTAQ+RMHVGIARKIKHGARKVVLD
Sbjct: 1240 ALYKAGLRTPLAIAEASDAEVIKALFESASWTAEESTAQRRMHVGIARKIKHGARKVVLD 1299

Query: 497  KAEEARIAAFSAFKSLGFIVPQISRPLSASAGGNITAQVAASIPSEIVNFNPI 550
            KAEEARIAAFSAFKSLG IVPQISRPLS SA GNITAQVAASIPSEI   N +
Sbjct: 1300 KAEEARIAAFSAFKSLGLIVPQISRPLSVSADGNITAQVAASIPSEIDTSNRV 1352

[Close]
BLAST of Lag0025335 vs. ExPASy Swiss-Prot
Match: Q588V7 (Helicase and polymerase-containing protein TEBICHI OS=Arabidopsis thaliana OX=3702 GN=TEB PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 6.1e-24
Identity = 62/98 (63.27%), Postives = 78/98 (79.59%), Query Frame = 0 

Query: 437  ALYKASLRTPLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLD 496
            ALYKA LRT  AIAEAS  EIVKALFES++W A E T Q+R+H+G+A+KIK+GARK+VL+
Sbjct: 1236 ALYKAGLRTSQAIAEASIPEIVKALFESSAWAA-EGTGQRRIHLGLAKKIKNGARKIVLE 1295

Query: 497  KAEEARIAAFSAFKSLGFIVPQISRPLSASAGGNITAQ 535
            KAEEAR AAFSAFKSLG  V ++S+PL  +   ++  Q
Sbjct: 1296 KAEEARAAAFSAFKSLGLDVNELSKPLPLAPASSLNGQ 1332

[Close]
BLAST of Lag0025335 vs. ExPASy TrEMBL
Match: A0A6J1BQB6 (helicase and polymerase-containing protein TEBICHI isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004788 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-43
Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0 

Query: 437  ALYKASLRTPLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLD 496
            ALYKA LRTPLAIAEASDAE++KALFESASWTAEESTAQ+RMHVGIARKIKHGARKVVLD
Sbjct: 1240 ALYKAGLRTPLAIAEASDAEVIKALFESASWTAEESTAQRRMHVGIARKIKHGARKVVLD 1299

Query: 497  KAEEARIAAFSAFKSLGFIVPQISRPLSASAGGNITAQVAASIPSEIVNFNPI 550
            KAEEARIAAFSAFKSLG IVPQISRPLS SA GNITAQVAASIPSEI   N +
Sbjct: 1300 KAEEARIAAFSAFKSLGLIVPQISRPLSVSADGNITAQVAASIPSEIDTSNRV 1352

[Close]
BLAST of Lag0025335 vs. ExPASy TrEMBL
Match: A0A6J1BRN6 (helicase and polymerase-containing protein TEBICHI isoform X3 OS=Momordica charantia OX=3673 GN=LOC111004788 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-43
Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0 

Query: 437  ALYKASLRTPLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLD 496
            ALYKA LRTPLAIAEASDAE++KALFESASWTAEESTAQ+RMHVGIARKIKHGARKVVLD
Sbjct: 1199 ALYKAGLRTPLAIAEASDAEVIKALFESASWTAEESTAQRRMHVGIARKIKHGARKVVLD 1258

Query: 497  KAEEARIAAFSAFKSLGFIVPQISRPLSASAGGNITAQVAASIPSEIVNFNPI 550
            KAEEARIAAFSAFKSLG IVPQISRPLS SA GNITAQVAASIPSEI   N +
Sbjct: 1259 KAEEARIAAFSAFKSLGLIVPQISRPLSVSADGNITAQVAASIPSEIDTSNRV 1311

[Close]
BLAST of Lag0025335 vs. ExPASy TrEMBL
Match: A0A6J1BQ53 (helicase and polymerase-containing protein TEBICHI isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004788 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-43
Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0 

Query: 437  ALYKASLRTPLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLD 496
            ALYKA LRTPLAIAEASDAE++KALFESASWTAEESTAQ+RMHVGIARKIKHGARKVVLD
Sbjct: 1239 ALYKAGLRTPLAIAEASDAEVIKALFESASWTAEESTAQRRMHVGIARKIKHGARKVVLD 1298

Query: 497  KAEEARIAAFSAFKSLGFIVPQISRPLSASAGGNITAQVAASIPSEIVNFNPI 550
            KAEEARIAAFSAFKSLG IVPQISRPLS SA GNITAQVAASIPSEI   N +
Sbjct: 1299 KAEEARIAAFSAFKSLGLIVPQISRPLSVSADGNITAQVAASIPSEIDTSNRV 1351

[Close]
BLAST of Lag0025335 vs. ExPASy TrEMBL
Match: A0A6J1BU32 (helicase and polymerase-containing protein TEBICHI isoform X4 OS=Momordica charantia OX=3673 GN=LOC111004788 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-43
Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0 

Query: 437  ALYKASLRTPLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLD 496
            ALYKA LRTPLAIAEASDAE++KALFESASWTAEESTAQ+RMHVGIARKIKHGARKVVLD
Sbjct: 1183 ALYKAGLRTPLAIAEASDAEVIKALFESASWTAEESTAQRRMHVGIARKIKHGARKVVLD 1242

Query: 497  KAEEARIAAFSAFKSLGFIVPQISRPLSASAGGNITAQVAASIPSEIVNFNPI 550
            KAEEARIAAFSAFKSLG IVPQISRPLS SA GNITAQVAASIPSEI   N +
Sbjct: 1243 KAEEARIAAFSAFKSLGLIVPQISRPLSVSADGNITAQVAASIPSEIDTSNRV 1295

[Close]
BLAST of Lag0025335 vs. ExPASy TrEMBL
Match: A0A6J1BQC1 (helicase and polymerase-containing protein TEBICHI isoform X6 OS=Momordica charantia OX=3673 GN=LOC111004788 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-43
Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0 

Query: 437  ALYKASLRTPLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLD 496
            ALYKA LRTPLAIAEASDAE++KALFESASWTAEESTAQ+RMHVGIARKIKHGARKVVLD
Sbjct: 1240 ALYKAGLRTPLAIAEASDAEVIKALFESASWTAEESTAQRRMHVGIARKIKHGARKVVLD 1299

Query: 497  KAEEARIAAFSAFKSLGFIVPQISRPLSASAGGNITAQVAASIPSEIVNFNPI 550
            KAEEARIAAFSAFKSLG IVPQISRPLS SA GNITAQVAASIPSEI   N +
Sbjct: 1300 KAEEARIAAFSAFKSLGLIVPQISRPLSVSADGNITAQVAASIPSEIDTSNRV 1352

[Close]
BLAST of Lag0025335 vs. TAIR 10
Match: AT4G32700.2 (helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding )

HSP 1 Score: 114.0 bits (284), Expect = 4.3e-25
Identity = 62/98 (63.27%), Postives = 78/98 (79.59%), Query Frame = 0 

Query: 437  ALYKASLRTPLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLD 496
            ALYKA LRT  AIAEAS  EIVKALFES++W A E T Q+R+H+G+A+KIK+GARK+VL+
Sbjct: 1236 ALYKAGLRTSQAIAEASIPEIVKALFESSAWAA-EGTGQRRIHLGLAKKIKNGARKIVLE 1295

Query: 497  KAEEARIAAFSAFKSLGFIVPQISRPLSASAGGNITAQ 535
            KAEEAR AAFSAFKSLG  V ++S+PL  +   ++  Q
Sbjct: 1296 KAEEARAAAFSAFKSLGLDVNELSKPLPLAPASSLNGQ 1332

The following BLAST results are available for this feature:
BLAST of Lag0025335 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038885698.12.3e-4491.15helicase and polymerase-containing protein TEBICHI isoform X1 [Benincasa hispida... [more]
XP_038885703.12.3e-4491.15helicase and polymerase-containing protein TEBICHI isoform X3 [Benincasa hispida... [more]
XP_038885702.12.3e-4491.15helicase and polymerase-containing protein TEBICHI isoform X2 [Benincasa hispida... [more]
XP_022131666.14.3e-4389.38helicase and polymerase-containing protein TEBICHI isoform X2 [Momordica charant... [more]
XP_022131670.14.3e-4389.38helicase and polymerase-containing protein TEBICHI isoform X6 [Momordica charant... [more]
BLAST of Lag0025335 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q588V76.1e-2463.27Helicase and polymerase-containing protein TEBICHI OS=Arabidopsis thaliana OX=37... [more]
BLAST of Lag0025335 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BQB62.1e-4389.38helicase and polymerase-containing protein TEBICHI isoform X1 OS=Momordica chara... [more]
A0A6J1BRN62.1e-4389.38helicase and polymerase-containing protein TEBICHI isoform X3 OS=Momordica chara... [more]
A0A6J1BQ532.1e-4389.38helicase and polymerase-containing protein TEBICHI isoform X2 OS=Momordica chara... [more]
A0A6J1BU322.1e-4389.38helicase and polymerase-containing protein TEBICHI isoform X4 OS=Momordica chara... [more]
A0A6J1BQC12.1e-4389.38helicase and polymerase-containing protein TEBICHI isoform X6 OS=Momordica chara... [more]
BLAST of Lag0025335 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G32700.24.3e-2563.27helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed ... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..403
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 411..430

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0025335.1Lag0025335.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:1990067 intrachromosomal DNA recombination
biological_process GO:0009933 meristem structural organization
biological_process GO:0009640 photomorphogenesis
biological_process GO:2000011 regulation of adaxial/abaxial pattern formation
biological_process GO:1902749 regulation of cell cycle G2/M phase transition
biological_process GO:0010468 regulation of gene expression
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003887 DNA-directed DNA polymerase activity
molecular_function GO:0004386 helicase activity