Lag0024272 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCTTCTAAACATCTTTTGTTTCATCATATTGCTTGCTTTAGGATCAAACATTATCAAATCATGTTTTGGACAATCCAAGCTACAAGATCCATTGTCCTCATGGCAAGTGACCATATTGAATCATATGAAGGATTCAAGTCTGGTGGCTCATTGCAAGTCGAAAGACGACGATTTGGGCGAGCACATAATCGGTGTCAGAGGTAAATACTACTGGAATTTTGATGAAAATATTTGGCAAACAACATTGTTTTGGTGTAATTTTAGCAGCAAACATGGACAAGCTTCTGGTAATGTTTTCTGGCCAGAGAGTGAAACATTCCTCACTGATAATTGTATTCATGGTAACTGTGTTTGGGCTGCTAGAGACCAAGGCATTTACTTTCATCTTGGCTCTCTCAAGACCTTTCAATTATTGTATCCTTGGAAATGA ATGAAGCTTCTAAACATCTTTTGTTTCATCATATTGCTTGCTTTAGGATCAAACATTATCAAATCATGTTTTGGACAATCCAAGCTACAAGATCCATTGTCCTCATGGCAAGTGACCATATTGAATCATATGAAGGATTCAAGTCTGGTGGCTCATTGCAAGTCGAAAGACGACGATTTGGGCGAGCACATAATCGGTGTCAGAGGTAAATACTACTGGAATTTTGATGAAAATATTTGGCAAACAACATTGTTTTGGTGTAATTTTAGCAGCAAACATGGACAAGCTTCTGGTAATGTTTTCTGGCCAGAGAGTGAAACATTCCTCACTGATAATTGTATTCATGGTAACTGTGTTTGGGCTGCTAGAGACCAAGGCATTTACTTTCATCTTGGCTCTCTCAAGACCTTTCAATTATTGTATCCTTGGAAATGA ATGAAGCTTCTAAACATCTTTTGTTTCATCATATTGCTTGCTTTAGGATCAAACATTATCAAATCATGTTTTGGACAATCCAAGCTACAAGATCCATTGTCCTCATGGCAAGTGACCATATTGAATCATATGAAGGATTCAAGTCTGGTGGCTCATTGCAAGTCGAAAGACGACGATTTGGGCGAGCACATAATCGGTGTCAGAGGTAAATACTACTGGAATTTTGATGAAAATATTTGGCAAACAACATTGTTTTGGTGTAATTTTAGCAGCAAACATGGACAAGCTTCTGGTAATGTTTTCTGGCCAGAGAGTGAAACATTCCTCACTGATAATTGTATTCATGGTAACTGTGTTTGGGCTGCTAGAGACCAAGGCATTTACTTTCATCTTGGCTCTCTCAAGACCTTTCAATTATTGTATCCTTGGAAATGA MKLLNIFCFIILLALGSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHGNCVWAARDQGIYFHLGSLKTFQLLYPWK Homology
BLAST of Lag0024272 vs. NCBI nr
Match: XP_023001658.1 (S-protein homolog 74-like [Cucurbita maxima]) HSP 1 Score: 182.6 bits (462), Expect = 2.5e-42 Identity = 85/148 (57.43%), Postives = 107/148 (72.30%), Query Frame = 0
BLAST of Lag0024272 vs. NCBI nr
Match: XP_023522257.1 (S-protein homolog 1-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 177.9 bits (450), Expect = 6.1e-41 Identity = 78/115 (67.83%), Postives = 89/115 (77.39%), Query Frame = 0
BLAST of Lag0024272 vs. NCBI nr
Match: XP_022954425.1 (S-protein homolog 74-like [Cucurbita moschata]) HSP 1 Score: 176.0 bits (445), Expect = 2.3e-40 Identity = 75/128 (58.59%), Postives = 92/128 (71.88%), Query Frame = 0
BLAST of Lag0024272 vs. NCBI nr
Match: XP_022954429.1 (S-protein homolog 74-like [Cucurbita moschata]) HSP 1 Score: 175.6 bits (444), Expect = 3.0e-40 Identity = 76/128 (59.38%), Postives = 92/128 (71.88%), Query Frame = 0
BLAST of Lag0024272 vs. NCBI nr
Match: XP_022954427.1 (S-protein homolog 74-like [Cucurbita moschata]) HSP 1 Score: 172.6 bits (436), Expect = 2.5e-39 Identity = 75/128 (58.59%), Postives = 91/128 (71.09%), Query Frame = 0
BLAST of Lag0024272 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 9.8e-18 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 0
BLAST of Lag0024272 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.7e-17 Identity = 45/139 (32.37%), Postives = 72/139 (51.80%), Query Frame = 0
BLAST of Lag0024272 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2) HSP 1 Score: 68.9 bits (167), Expect = 5.2e-11 Identity = 48/139 (34.53%), Postives = 69/139 (49.64%), Query Frame = 0
BLAST of Lag0024272 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.5e-10 Identity = 35/113 (30.97%), Postives = 59/113 (52.21%), Query Frame = 0
BLAST of Lag0024272 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.7e-10 Identity = 43/146 (29.45%), Postives = 68/146 (46.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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