Lag0022057 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0022057
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr7: 17178991 .. 17181531 (-)
RNA-Seq ExpressionLag0022057
SyntenyLag0022057
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCTCCTATTTTGGAATGCTCGTGGTTTGGGGTCACCACAAGCATTCCGCAGATTGTACAATCTGGTGCAATCTCATAAACCCCAAATGGTGTTCCTTACAGAAACAAAGATGTGTGGTTCCAGGATGAATTCAATCAAAATTCAACTGGGTTTTCAGAATTGTTTTAGTGTTGATTGTTGTGGAAGAAGCGGTGGGTTAAGTCTTTTTTGGTCTGCTGAGATTGGCTTCTCTCTTCTTTCCTTTTCGAAAAATCATATCGATGGCTGGGTTGATTGGGACTCAAAGAATTGGCGCTTCACCGGCTTCTATGGCAACCCTCAGACAGAATTGAGATACTTATCTTGGGCCTTGCTTAAGAATCTTTGTGGCAATACTTCTACTCCGTGGCTAGTTGGGGGTGACTTTAATGGGATCCTCTTCCAACATGAGAAACAAGGAGGTAGAGATAAGTCAGAGGCCGAGTTGAACGATTTTAGAGCATCGCTGGATGATTGTGGTTTGATGGATGTTGGTTTTACGGGCGATATATTCACATGGACCAATGAACGACCAGGAGAGGAAAATGTTAAGGAACGTTTGGATCGTATTTGTGTCACAGAGGGATGGAAGGACCTTTTTCCTGATTGTTCGATTGATCACCTTCCATTTAACAGATCCGACCACAGGCCAATTTTGTTGACGCTCGTTCGTTTTACTGGTCTAAGGGGAGCACGCAGAGGTAGGATTCATCGCTTTGAAGAAGCGTGGAATCGACTTCCCGAATGTTCTGAGATTGTTATTTGCCAGGTTGGAAGGAGAAACTGTTTTCGGTGGGTGGTAAAGAAATTTTGTTGAAATCAGTAATTCAGGCAGTTCCTTGTTACTCCATGATTTGTTTTCGGTTACCAAAAAAATTGCTTAATTCAATTTCACAAACTATGGCTCGGTTTTGATGGAATGAAGTGGAGGGGAGAAATCGTATTCACTGGGTTAAATGGAGTGATCTGTGTAAACCCAAATGTCTTGGTGGGATGGGCTTCAAGGATTTAGAGGTTTTTAATCAGTCTTTGCTTGCTAAACGAAAATTTTAAATGATTCGGAATCTCTCATGGCGAGGATGCTGAAGGGGAGATATTTTCCCAATTGTGATTTTCTTGAAGCCCAAACCGGTTATCGTGCTTCTTTCATTTGGCGCAGTGTTATGTGGGGGAAAAGAGCTTCTGGTAAAGGGTCTTCGATGGCGAATTGGGGACGGTCAGTCTGCTTCGATTTATTCCTCCAATTGGCTTCCTCGAGATTTCTCTCTTTGTGTGAGTTCGGCGGTGACGCTTCCTTTGGATACATGGGGTGAGTGCTCTAATGTCAGCTTCTGGGGGTTGGGATGAAGAGAAAATCTCTCGGCACTTTGATTTTGAGGAAGCTCGACTTATTATTTCGCTTCCGCTCTCCTCATTGCGATCTGATTAACTGATATGACATTATGAAAAGAACGGTGTCTTTTCAGTGAAGAGCGGGTATAGAGTGGGCCAACAAGTCCGCTTGGCTGACAGGGCTTCTTCGTCTAGCTCGATGCAATCCCGTGTCTGGTGGAAGGGTTATGGAATATGCAGCTCCCTGGGAAAATCAAGATATTCATGTGGCGGTTGTTCTTGGACCGTCTGCCGACGATATCGAATCTGAATGTTAGGGGGTTGGATCTTCCAAATCTTTGCAGCTTTTGTGGCCGACGAGGAGAGGATGCTCTCCATATTTTTTGGCTCTGTAAGTTCTCAAGGCTTCAGTGGACTCGCTGTTCTATTGCTCGTGGTGCGGTCCTTAGAGTCCTGTCCTCTATTTCTTTGTTGTTGCAGGATTTAAAGGAAGGGATTTCTTGGGATGAGTTTGCGGTTCTTGCGACTTTTCTTTGGGGTCTTTGGAATGCACAAAATCGTCTCCGTCTGCAAGGTTTAGTGCCAACTTCTGATATTGGGCCATGGGCACTTCAGTATGTGTGAATATTCCGTGAGGCAAATCTTCGGTCTGGAGTGTGTGGGTCTGATCGGCGGAATCGGGCAGATGTGCGGTGGTAGGCTCCCGCTCGCGGTGGTTTAAGCTAAATACCGATGCCACCTTTGATCGAAATTCGTTCTCAGCGGGTCTGGGTATTGTGGTTCGGGACTGCCATGGCAACGTTCTGCTATCGACGGTAAAGTTCATCGTGGGTGTGCGCTGTCGGTGGATCTTGTAGAAGGCCTTGCTGCTACTGAGGGGGTCCGATTGTGTTCTGAATCTGGATGCCGACCTTTTCATTTGGAAACTGATTCTTCGCGGATCTTCCAGCTGTTGCAAGGTGACGTCGAAGACCTTTCAGAAGTGGGCATGGTGACTTCCAGTCTTCGTCAACATCTATCATCTGTTGGGTTCCCTTCTTTCTTCACGTTGCGAGAGGTCAATCAAGCAGCAGATTGTTTGGCAAAGCTAGCATTGCAAAATCGTTGGAACCAAGTTTGGGTTGAAGACTATCCTAAGGAACTTTCTAGTTTTCTTGTTGTTAATGCTTCTTTTGTTATTTCTTAA

mRNA sequence

ATGAGTCTCCTATTTTGGAATGCTCGTGGTTTGGGGTCACCACAAGCATTCCGCAGATTGTACAATCTGGTGCAATCTCATAAACCCCAAATGGTGTTCCTTACAGAAACAAAGATGTGTGGTTCCAGGATGAATTCAATCAAAATTCAACTGGGTTTTCAGAATTGTTTTAGTGTTGATTGTTGTGGAAGAAGCGGTGGGTTAAGTCTTTTTTGGTCTGCTGAGATTGGCTTCTCTCTTCTTTCCTTTTCGAAAAATCATATCGATGGCTGGGTTGATTGGGACTCAAAGAATTGGCGCTTCACCGGCTTCTATGGCAACCCTCAGACAGAATTGAGATACTTATCTTGGGCCTTGCTTAAGAATCTTTGTGGCAATACTTCTACTCCGTGGCTAGTTGGGGGTGACTTTAATGGGATCCTCTTCCAACATGAGAAACAAGGAGGTAGAGATAAGTCAGAGGCCGAGTTGAACGATTTTAGAGCATCGCTGGATGATTGTGGTTTGATGGATGTTGGTTTTACGGGCGATATATTCACATGGACCAATGAACGACCAGGAGAGGAAAATGTTAAGGAACGTTTGGATCGTATTTGTGTCACAGAGGGATGGAAGGACCTTTTTCCTGATTGTTCGATTGATCACCTTCCATTTAACAGATCCGACCACAGGCCAATTTTGTTGACGCTCGTTCGTTTTACTGGTCTAAGGGGAGCACGCAGAGGTAGGATTCATCGCTTTGAAGAAGCGTGGAATCGACTTCCCGAATGTTCTGAGATTGTTATTTGCCAGCCCAAACCGGTTATCGTGCTTCTTTCATTTGGCGCAGTGTTATGTGGGGGAAAAGAGCTTCTGGTAAAGGGTCTTCGATGGCGAATTGGGGACGGTCAGTCTGCTTCGATTTATTCCTCCAATTGGCTTCCTCGAGATTTCTCTCTTTGTGTGAGTTCGGCGGTGACGCTTCCTTTGGATACATGGGTGAAGAGCGGGTATAGAGTGGGCCAACAAGTCCGCTTGGCTGACAGGGCTTCTTCGTCTAGCTCGATGCAATCCCGTGTCTGGTGGAAGGGTTATGGAATATGCAGCTCCCTGGGAAAATCAAGATATTCATGTGGCGCTTTTGTGGCCGACGAGGAGAGGATGCTCTCCATATTTTTTGGCTCTGATTTAAAGGAAGGGATTTCTTGGGATGAGTTTGCGGTTCTTGCGACTTTTCTTTGGGGTCTTTGGAATGCACAAAATCGTCTCCGTCTGCAAGGTTTAGTGCCAACTTCTGATATTGGGCCATGGGCACTTCACGGGTCTGGGTATTGTGGTTCGGGACTGCCATGGCAACGTTCTGCTATCGACGGTAAAGTTCATCGTGGGTGTGCGCTGTCGGTGGATCTTGTAGAAGGCCTTGCTGCTACTGAGGGGGTCCGATTGTGTTCTGAATCTGGATGCCGACCTTTTCATTTGGAAACTGATTCTTCGCGGATCTTCCAGCTGTTGCAAGGTGACGTCGAAGACCTTTCAGAAGTGGGCATGGTGACTTCCAGTCTTCGTCAACATCTATCATCTGTTGGGTTCCCTTCTTTCTTCACGTTGCGAGAGGTCAATCAAGCAGCAGATTGTTTGGCAAAGCTAGCATTGCAAAATCGTTGGAACCAAGTTTGGGTTGAAGACTATCCTAAGGAACTTTCTAGTTTTCTTGTTGTTAATGCTTCTTTTGTTATTTCTTAA

Coding sequence (CDS)

ATGAGTCTCCTATTTTGGAATGCTCGTGGTTTGGGGTCACCACAAGCATTCCGCAGATTGTACAATCTGGTGCAATCTCATAAACCCCAAATGGTGTTCCTTACAGAAACAAAGATGTGTGGTTCCAGGATGAATTCAATCAAAATTCAACTGGGTTTTCAGAATTGTTTTAGTGTTGATTGTTGTGGAAGAAGCGGTGGGTTAAGTCTTTTTTGGTCTGCTGAGATTGGCTTCTCTCTTCTTTCCTTTTCGAAAAATCATATCGATGGCTGGGTTGATTGGGACTCAAAGAATTGGCGCTTCACCGGCTTCTATGGCAACCCTCAGACAGAATTGAGATACTTATCTTGGGCCTTGCTTAAGAATCTTTGTGGCAATACTTCTACTCCGTGGCTAGTTGGGGGTGACTTTAATGGGATCCTCTTCCAACATGAGAAACAAGGAGGTAGAGATAAGTCAGAGGCCGAGTTGAACGATTTTAGAGCATCGCTGGATGATTGTGGTTTGATGGATGTTGGTTTTACGGGCGATATATTCACATGGACCAATGAACGACCAGGAGAGGAAAATGTTAAGGAACGTTTGGATCGTATTTGTGTCACAGAGGGATGGAAGGACCTTTTTCCTGATTGTTCGATTGATCACCTTCCATTTAACAGATCCGACCACAGGCCAATTTTGTTGACGCTCGTTCGTTTTACTGGTCTAAGGGGAGCACGCAGAGGTAGGATTCATCGCTTTGAAGAAGCGTGGAATCGACTTCCCGAATGTTCTGAGATTGTTATTTGCCAGCCCAAACCGGTTATCGTGCTTCTTTCATTTGGCGCAGTGTTATGTGGGGGAAAAGAGCTTCTGGTAAAGGGTCTTCGATGGCGAATTGGGGACGGTCAGTCTGCTTCGATTTATTCCTCCAATTGGCTTCCTCGAGATTTCTCTCTTTGTGTGAGTTCGGCGGTGACGCTTCCTTTGGATACATGGGTGAAGAGCGGGTATAGAGTGGGCCAACAAGTCCGCTTGGCTGACAGGGCTTCTTCGTCTAGCTCGATGCAATCCCGTGTCTGGTGGAAGGGTTATGGAATATGCAGCTCCCTGGGAAAATCAAGATATTCATGTGGCGCTTTTGTGGCCGACGAGGAGAGGATGCTCTCCATATTTTTTGGCTCTGATTTAAAGGAAGGGATTTCTTGGGATGAGTTTGCGGTTCTTGCGACTTTTCTTTGGGGTCTTTGGAATGCACAAAATCGTCTCCGTCTGCAAGGTTTAGTGCCAACTTCTGATATTGGGCCATGGGCACTTCACGGGTCTGGGTATTGTGGTTCGGGACTGCCATGGCAACGTTCTGCTATCGACGGTAAAGTTCATCGTGGGTGTGCGCTGTCGGTGGATCTTGTAGAAGGCCTTGCTGCTACTGAGGGGGTCCGATTGTGTTCTGAATCTGGATGCCGACCTTTTCATTTGGAAACTGATTCTTCGCGGATCTTCCAGCTGTTGCAAGGTGACGTCGAAGACCTTTCAGAAGTGGGCATGGTGACTTCCAGTCTTCGTCAACATCTATCATCTGTTGGGTTCCCTTCTTTCTTCACGTTGCGAGAGGTCAATCAAGCAGCAGATTGTTTGGCAAAGCTAGCATTGCAAAATCGTTGGAACCAAGTTTGGGTTGAAGACTATCCTAAGGAACTTTCTAGTTTTCTTGTTGTTAATGCTTCTTTTGTTATTTCTTAA

Protein sequence

MSLLFWNARGLGSPQAFRRLYNLVQSHKPQMVFLTETKMCGSRMNSIKIQLGFQNCFSVDCCGRSGGLSLFWSAEIGFSLLSFSKNHIDGWVDWDSKNWRFTGFYGNPQTELRYLSWALLKNLCGNTSTPWLVGGDFNGILFQHEKQGGRDKSEAELNDFRASLDDCGLMDVGFTGDIFTWTNERPGEENVKERLDRICVTEGWKDLFPDCSIDHLPFNRSDHRPILLTLVRFTGLRGARRGRIHRFEEAWNRLPECSEIVICQPKPVIVLLSFGAVLCGGKELLVKGLRWRIGDGQSASIYSSNWLPRDFSLCVSSAVTLPLDTWVKSGYRVGQQVRLADRASSSSSMQSRVWWKGYGICSSLGKSRYSCGAFVADEERMLSIFFGSDLKEGISWDEFAVLATFLWGLWNAQNRLRLQGLVPTSDIGPWALHGSGYCGSGLPWQRSAIDGKVHRGCALSVDLVEGLAATEGVRLCSESGCRPFHLETDSSRIFQLLQGDVEDLSEVGMVTSSLRQHLSSVGFPSFFTLREVNQAADCLAKLALQNRWNQVWVEDYPKELSSFLVVNASFVIS
Homology
BLAST of Lag0022057 vs. NCBI nr
Match: KAF5449841.1 (hypothetical protein F2P56_030246 [Juglans regia])

HSP 1 Score: 250.0 bits (637), Expect = 5.0e-62
Identity = 125/265 (47.17%), Postives = 162/265 (61.13%), Query Frame = 0

Query: 1   MSLLFWNARGLGSPQAFRRLYNLVQSHKPQMVFLTETKMCGSRMNSIKIQLGFQNCFSVD 60
           M +L WN+ GLG+PQ  R L +L+    P +VFL ETKM    M + K + GF NCF VD
Sbjct: 1   MKILCWNSSGLGNPQGIRALRDLITREDPDLVFLQETKMRAQAMTTCKYKFGFVNCFFVD 60

Query: 61  CCGRSGGLSLFWSAEIGFSLLSFSKNHIDGWV-DWDSKNWRFTGFYGNPQTELRYLSWAL 120
           C GRSGGLSL W  EI  S+ SFS+ HID  + + D   WRFTG YG+P    RYL+W L
Sbjct: 61  CVGRSGGLSLLWKREISVSISSFSRYHIDACIQESDLAEWRFTGVYGHPDASNRYLTWNL 120

Query: 121 LKNLCGNTSTPWLVGGDFNGILFQHEKQGGRDKSEAELNDFRASLDDCGLMDVGFTGDIF 180
           ++ LC +TS PWLVGGDFN +L+ HEK+GGR    A+L +FRA ++DC L D+GF G  F
Sbjct: 121 MRTLCPSTSGPWLVGGDFNEVLYLHEKRGGRPWPYAQLENFRAVMEDCALQDLGFQGPRF 180

Query: 181 TWTNERPGEENVKERLDRICVTEGWKDLFPDCSIDHLPFNRSDHRPILLTLVRFTGL--- 240
           TW N R G + + ERLDR    +   ++FP   + H     SDH PIL      TGL   
Sbjct: 181 TWCNGRTGIQRISERLDRFFGNQQLWEVFPKERVRHGVITYSDHLPILFE----TGLPLI 240

Query: 241 RGARRGRIHRFEEAWNRLPECSEIV 262
           RG +  +  RFE  W    +C++I+
Sbjct: 241 RG-KHPKKFRFEVMWVGEEKCAQII 260

BLAST of Lag0022057 vs. NCBI nr
Match: KAF7824053.1 (hypothetical protein G2W53_022197 [Senna tora])

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-57
Identity = 127/335 (37.91%), Postives = 176/335 (52.54%), Query Frame = 0

Query: 1   MSLLFWNARGLGSPQAFRRLYNLVQSHKPQMVFLTETKMCGSRMNSIKIQLGFQNCFSVD 60
           MS + WN RGLG+P+A R L  L Q  +P ++FL ETK   S M  +K QLGF   F+VD
Sbjct: 405 MSHICWNCRGLGTPRAVRDLKRLNQDKRPSLIFLMETKAKASAMKRLKFQLGFDCVFAVD 464

Query: 61  CCG----RSGGLSLFWSAEIGFSLLSFSKNHIDGWVDWDSKN--WRFTGFYGNPQTELRY 120
           C G    R+GGL+LFW   +  +L SFS NHID  V     N  WR TG +G P+ + ++
Sbjct: 465 CSGEGKQRAGGLALFWYNTLDLTLASFSSNHIDVIVSDAGLNIKWRLTGVHGFPEEQSKH 524

Query: 121 LSWALLKNLCGNTSTPWLVGGDFNGILFQHEKQGGRDKSEAELNDFRASLDDCGLMDVGF 180
            +W LL+ L  N+  PWL  GDFN I+F  EKQGG  KS+  +  FR + + CG  D+GF
Sbjct: 525 QTWDLLRLLASNSDLPWLCYGDFNEIMFASEKQGGTAKSDRSMQAFRDACNHCGFTDMGF 584

Query: 181 TGDIFTWTNERPGEENVKERLDRICVTEGWKDLFPDCSIDHLPFNRSDHRPILLTLVRFT 240
            G  FTW N R  + N++ERLDR+  TE W   FP   ++H+    SDH  + ++     
Sbjct: 585 KGYPFTWNNGRRDQHNIQERLDRVFATEEWLLKFPYTEVNHISHFSSDHCALEISFDSLP 644

Query: 241 GLRGARRGRIHRFEEAWNRLPECSEIVIC----------QPKPVIVLLSF---------- 300
                RR R+ RFEEAW     C +++            +   V   LSF          
Sbjct: 645 PSNHTRRQRLFRFEEAWCSDERCKDVINAVWQGTDAFSEKLTSVASNLSFMEATLAPNAS 704

Query: 301 --GAVLCGGKELLVKGLRWRIGDGQSASIYSSNWL 308
                +   + +L  G  WR+G+G   +I+  NW+
Sbjct: 705 FTWRCIMKARWVLQLGAGWRVGNGFQINIWEDNWI 739

BLAST of Lag0022057 vs. NCBI nr
Match: XP_024036939.1 (uncharacterized protein LOC112096938 [Citrus clementina])

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-57
Identity = 114/265 (43.02%), Postives = 163/265 (61.51%), Query Frame = 0

Query: 1   MSLLFWNARGLGSPQAFRRLYNLVQSHKPQMVFLTETKMCGSRMNSIKIQLGFQNCFSVD 60
           M++L WN RGLG+P+AF+ L  ++Q H  Q+VFL ETK+   +MN I  +L F+NC +V+
Sbjct: 1   MNILSWNVRGLGNPRAFQALRKILQLHGAQLVFLCETKVSTMQMNVIANKLSFENCLAVN 60

Query: 61  CCGRSGGLSLFWSAEIGFSLLSFSKNHIDGWVDWDSKN-WRFTGFYGNPQTELRYLSWAL 120
           C GR GG+++ W ++IG  + S+S++HID      + N  R TG YG+P+T  +  +W L
Sbjct: 61  CNGRGGGIAMLWKSDIGVQINSYSQHHIDAETQIPNGNRMRVTGVYGHPKTGQKKHTWML 120

Query: 121 LKNLCGNTSTPWLVGGDFNGILFQHEKQGGRDKSEAELNDFRASLDDCGLMDVGFTGDIF 180
           L+ L   +S+PWL  GDFN IL   EK GG D++   +NDFR  L DCGL DVG+ G  F
Sbjct: 121 LRRLAVLSSSPWLCCGDFNEILHPDEKSGGNDRNVNLINDFREVLRDCGLKDVGYRGYAF 180

Query: 181 TWTNERPGEENVKERLDRICVTEGWKDLFPDCSIDHLPFNRSDHRPILLTLVRFTG---L 240
           TW N R G+  ++ERLDR    + W D F DC   +L    SDH P+L+ +   +G    
Sbjct: 181 TWNNGRYGQGFMEERLDRFVCNKAWSDRFVDCEASNLDTWTSDHCPVLMAVQERSGGMNQ 240

Query: 241 RGARRGRIHRFEEAWNRLPECSEIV 262
           RG    +IH +E+ W+    C EI+
Sbjct: 241 RGRHSSQIH-YEDTWSSYDVCKEII 264

BLAST of Lag0022057 vs. NCBI nr
Match: XP_012857846.1 (PREDICTED: uncharacterized protein LOC105977118 [Erythranthe guttata])

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-57
Identity = 113/263 (42.97%), Postives = 158/263 (60.08%), Query Frame = 0

Query: 1   MSLLFWNARGLGSPQAFRRLYNLVQSHKPQMVFLTETKMCGSRMNSIKIQLGFQNCFSVD 60
           MS +FWN +GLG+P     L ++++ H+P +VFL+ET+     ++ +K +    N  SVD
Sbjct: 1   MSCIFWNCQGLGAPLTIHTLGDILRDHRPLLVFLSETRATHQLIDKVKNKWNL-NGVSVD 60

Query: 61  CCGRSGGLSLFWSAEIGFSLLSFSKNHIDGWVDWDSKN--WRFTGFYGNPQTELRYLSWA 120
             G SGGL+L W  +I   L+S+S NHID  V   + N  WR TGFYG P+ + +YLSW 
Sbjct: 61  KIGNSGGLALMWQKDIDVRLISYSNNHIDAEVYERNHNSKWRVTGFYGYPEYDRKYLSWE 120

Query: 121 LLKNLCGNTSTPWLVGGDFNGILFQHEKQGGRDKSEAELNDFRASLDDCGLMDVGFTGDI 180
           L++NL  + + PWL+GGDFN IL   EK GG  +  A +  FR +L+DC L D+GF G  
Sbjct: 121 LIRNLRDHRTMPWLLGGDFNEILSNSEKTGGNARLPASIRAFRNTLEDCSLSDLGFEGSP 180

Query: 181 FTWTNERPGEENVKERLDRICVTEGWKDLFPDCSIDHLPFNRSDHRPILLTLVRFTGLRG 240
           FTW+N R   + V+ RLDR C   GW  LFP  S+ HL ++ SDH PI   L     ++ 
Sbjct: 181 FTWSNNRQAPDTVRCRLDRCCANNGWISLFPRASVYHLNYSGSDHLPIKAILRDSKNVQT 240

Query: 241 ARRGRIHRFEEAWNRLPECSEIV 262
            R+ R  RFE  W R  +C +I+
Sbjct: 241 LRKKRPFRFEATWFRRDDCEDII 262

BLAST of Lag0022057 vs. NCBI nr
Match: XP_012851712.1 (PREDICTED: uncharacterized protein LOC105971405 [Erythranthe guttata])

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-57
Identity = 113/263 (42.97%), Postives = 158/263 (60.08%), Query Frame = 0

Query: 1   MSLLFWNARGLGSPQAFRRLYNLVQSHKPQMVFLTETKMCGSRMNSIKIQLGFQNCFSVD 60
           MS +FWN +GLG+P     L ++++ H+P +VFL+ET+     ++ +K +    N  SVD
Sbjct: 1   MSCIFWNCQGLGAPLTIHTLGDILRDHRPLLVFLSETRATHQLIDKVKNKWNL-NGVSVD 60

Query: 61  CCGRSGGLSLFWSAEIGFSLLSFSKNHIDGWVDWDSKN--WRFTGFYGNPQTELRYLSWA 120
             G SGGL+L W  +I   L+S+S NHID  V   + N  WR TGFYG P+ + +YLSW 
Sbjct: 61  KIGNSGGLALMWQKDIDVRLISYSNNHIDAEVYERNHNSKWRVTGFYGYPEYDRKYLSWE 120

Query: 121 LLKNLCGNTSTPWLVGGDFNGILFQHEKQGGRDKSEAELNDFRASLDDCGLMDVGFTGDI 180
           L++NL  + + PWL+GGDFN IL   EK GG  +  A +  FR +L+DC L D+GF G  
Sbjct: 121 LIRNLRDHRTMPWLLGGDFNEILSNSEKTGGNARLPASIRAFRNTLEDCSLSDLGFEGSP 180

Query: 181 FTWTNERPGEENVKERLDRICVTEGWKDLFPDCSIDHLPFNRSDHRPILLTLVRFTGLRG 240
           FTW+N R   + V+ RLDR C   GW  LFP  S+ HL ++ SDH PI   L     ++ 
Sbjct: 181 FTWSNNRHAPDTVRCRLDRCCANNGWISLFPRASVYHLNYSGSDHLPIKAILRDSKNVQT 240

Query: 241 ARRGRIHRFEEAWNRLPECSEIV 262
            R+ R  RFE  W R  +C +I+
Sbjct: 241 LRKKRPFRFEATWFRRDDCEDII 262

BLAST of Lag0022057 vs. ExPASy TrEMBL
Match: A0A2N9EWI9 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7087 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.6e-58
Identity = 138/357 (38.66%), Postives = 189/357 (52.94%), Query Frame = 0

Query: 1   MSLLFWNARGLGSPQAFRRLYNLVQSHKPQMVFLTETKMCGSRMNSIKIQLGFQNCFSVD 60
           M+L+ WN RGLG+ +  R L +LV++  P ++FL ETK+    M  I++ LG+ N F V 
Sbjct: 420 MNLISWNCRGLGNHRTVRALRSLVKTKGPTVLFLIETKLDSVEMEHIRVLLGYVNMFVVP 479

Query: 61  CCGRSGGLSLFWSAEIGFSLLSFSKNHIDGWVDWDS-KNWRFTGFYGNPQTELRYLSWAL 120
           C GR GGL+LFW  +IG  + S+S++HID  V   S   WR TGFYG+P+   R  SWAL
Sbjct: 480 CYGRCGGLALFWGPDIGLEISSYSRHHIDSVVGVGSGYEWRLTGFYGHPEHHKRSESWAL 539

Query: 121 LKNLCGNTSTPWLVGGDFNGILFQHEKQGGRDKSEAELNDFRASLDDCGLMDVGFTGDIF 180
           L +L      PW   GDFN ILFQ EKQG  D+ E ++  FR  L  C L D+GF G  F
Sbjct: 540 LDHLRTRNVLPWCCVGDFNEILFQTEKQGYHDRPERQIQAFRDVLARCHLTDMGFQGVDF 599

Query: 181 TWTNERPGEENVKERLDRICVTEGWKDLFPDCSIDHLPFNRSDHRPILLTLVRFTGLRGA 240
           TW N R G  NV+ RLDR   T  W   F   ++ HLP +RSDH  +LL  V   G    
Sbjct: 600 TWDNRRDGPANVQVRLDRAVATTEWLAHFNASTVFHLPCSRSDH-VLLLVQVAQHGCPPR 659

Query: 241 RRGRIHRFEEAWNRLPECSEIVICQPKPVIVLLSFGAVLCGGKELLVKGLRWRIGDGQSA 300
           RR R+HRFE+ W   PEC  +V    K  +   S   ++C      +K +R  + +   A
Sbjct: 660 RRKRLHRFEDKWVLHPECEAVVEAAWKKEVTRGSPMYMVCE----KIKAVRMALVE-WGA 719

Query: 301 SIYSSNWLPRDFSLCVSSAVTLPLDTWVKSGYRVGQQVRLADRASSSSSMQSRVWWK 357
            +Y      R  ++ +     L    +     + G QVR A+R      +   V+W+
Sbjct: 720 RVYG-----RPKAVLLEKLQLLDNLKYANKEGQFGAQVREAEREVDMLLLSDEVYWR 765

BLAST of Lag0022057 vs. ExPASy TrEMBL
Match: A0A2N9G8I6 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23296 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.7e-58
Identity = 111/262 (42.37%), Postives = 166/262 (63.36%), Query Frame = 0

Query: 1   MSLLFWNARGLGSPQAFRRLYNLVQSHKPQMVFLTETKMCGSRMNSIKIQLGFQNCFSVD 60
           M LL WN +GLG+P+A R L+++V+   P+++FL ETK+   RM  I+++LGF N F+V 
Sbjct: 481 MILLSWNCQGLGNPEAVRALHHMVKKKGPEVLFLMETKLDAGRMEVIRVKLGFDNTFTVP 540

Query: 61  CCGRSGGLSLFWSAEIGFSLLSFSKNHIDGWVD-WDSKNWRFTGFYGNPQTELRYLSWAL 120
             GRSGGL+L W A+    + ++S++HID  VD   +K WR TGFYG P+   R  SWAL
Sbjct: 541 SLGRSGGLALLWKADAEVVIQNYSQHHIDAHVDSKQAKCWRLTGFYGRPEQHRRRESWAL 600

Query: 121 LKNLCGNTSTPWLVGGDFNGILFQHEKQGGRDKSEAELNDFRASLDDCGLMDVGFTGDIF 180
           LK+L      PW   GDFN IL  +EK GGR++S  ++ +F+ +++ C  +D+GF G  +
Sbjct: 601 LKHLSRLDVLPWCCLGDFNEILTVNEKYGGRERSLRQIMEFQEAVNICNFVDLGFQGASY 660

Query: 181 TWTNERPGEENVKERLDRICVTEGWKDLFPDCSIDHLPFNRSDHRPILLTLVRFTGLRGA 240
           TWTN R    N++ RLDR   T  W DLFP  S+ H+P + SDH  +++++V  T     
Sbjct: 661 TWTNNRDASANIQGRLDRALATAPWLDLFPRYSVSHIPGSVSDHLALVVSIVAGTSPSRI 720

Query: 241 RRGRIHRFEEAWNRLPECSEIV 262
           ++  + RFEE W   P+C +++
Sbjct: 721 KK-FVRRFEEKWATNPDCEKLI 741

BLAST of Lag0022057 vs. ExPASy TrEMBL
Match: A0A2N9IBI9 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49113 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.7e-58
Identity = 111/262 (42.37%), Postives = 166/262 (63.36%), Query Frame = 0

Query: 1   MSLLFWNARGLGSPQAFRRLYNLVQSHKPQMVFLTETKMCGSRMNSIKIQLGFQNCFSVD 60
           M LL WN +GLG+P+A R L+++V+   P+++FL ETK+   RM  I+++LGF N F+V 
Sbjct: 170 MILLSWNCQGLGNPEAVRALHHMVKKKGPEVLFLMETKLDAGRMEVIRVKLGFDNTFTVP 229

Query: 61  CCGRSGGLSLFWSAEIGFSLLSFSKNHIDGWVD-WDSKNWRFTGFYGNPQTELRYLSWAL 120
             GRSGGL+L W A+    + ++S++HID  VD   +K WR TGFYG P+   R  SWAL
Sbjct: 230 SLGRSGGLALLWKADAEVVIQNYSQHHIDAHVDSKQAKCWRLTGFYGRPEQHRRRESWAL 289

Query: 121 LKNLCGNTSTPWLVGGDFNGILFQHEKQGGRDKSEAELNDFRASLDDCGLMDVGFTGDIF 180
           LK+L      PW   GDFN IL  +EK GGR++S  ++ +F+ +++ C  +D+GF G  +
Sbjct: 290 LKHLSRLDVLPWCCLGDFNEILTVNEKYGGRERSLRQIMEFQEAVNICNFVDLGFQGASY 349

Query: 181 TWTNERPGEENVKERLDRICVTEGWKDLFPDCSIDHLPFNRSDHRPILLTLVRFTGLRGA 240
           TWTN R    N++ RLDR   T  W DLFP  S+ H+P + SDH  +++++V  T     
Sbjct: 350 TWTNNRDASANIQGRLDRALATAPWLDLFPRYSVSHIPGSVSDHLALVVSIVAGTSPSRI 409

Query: 241 RRGRIHRFEEAWNRLPECSEIV 262
           ++  + RFEE W   P+C +++
Sbjct: 410 KK-FVRRFEEKWATNPDCEKLI 430

BLAST of Lag0022057 vs. ExPASy TrEMBL
Match: A0A5C7IIT4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.3e-57
Identity = 182/574 (31.71%), Postives = 252/574 (43.90%), Query Frame = 0

Query: 10  GLGSPQAFRRLYNLVQSHKPQMVFLTETKMCGSRMNSIKIQLGFQNCFSVDCCGRSGGLS 69
           GLG  +AFR L++L+Q + P +VFL E       M S++I+LGF     VD  G SGGL 
Sbjct: 368 GLGGDRAFRVLHSLLQVNHPDIVFLIEIICVHKAMESVRIKLGFDAKLVVDRKGHSGGLC 427

Query: 70  LFWSAEIGFSLLSFSKNHIDGWVDW-DSKNWRFTGFYGNPQTELRYLSWALLKNLCGNTS 129
           L W AEI  +LLS+S+ HID  V   + K WR TGFYG+P    R   W LL+ L G + 
Sbjct: 428 LLWKAEIDVALLSYSRFHIDTVVTLRNDKVWRLTGFYGHPNLTQRIHGWNLLRRLAGMSP 487

Query: 130 TPWLVGGDFNGILFQHEKQGGRDKSEAELNDFRASLDDCGLMDVGFTGDIFTWTNERPGE 189
            PW VGGDFN I+   EK GG  + E  + +F+ +L+DCGL D+GF G  FTW+N R  E
Sbjct: 488 LPWFVGGDFNEIVGLSEKVGGNTRHECFMGNFQEALEDCGLRDLGFLGPRFTWSNRRDSE 547

Query: 190 ENVKERLDRICVTEGWKDLFPDCSIDHLPFNRSDHRPILLTLVRFTGLRGARRGRIHRF- 249
             ++ERLDR     GW DLF   SI HL F +SDHRPILL +       G R    HRF 
Sbjct: 548 HAIQERLDRCVGNTGWLDLFSCFSIKHLDFWKSDHRPILLEISDKKEEAGGR----HRFY 607

Query: 250 -EEAW-----------NRLPECSEIVICQPKPVIVLLSFGAVLCGGKELLVKGLRWRIGD 309
            +  W           ++LP    ++ C+ K  I+   F  V+            WR+  
Sbjct: 608 YDRCWAERDDFVRLDFSQLPFIDFVLFCKGKLDIMYFEFLCVVW-----------WRVWY 667

Query: 310 GQSASIY-SSNWLPRDFSLCVSSAVTLPLDTWVKSGYRVGQQVRLADRASSSSSMQSRV- 369
            ++  +Y  S+    DF +         LD W  S     Q  + A    + S ++ RV 
Sbjct: 668 RRNQLVYEKSSQTVHDFDV---------LD-WAASFI---QDFKAAKTVDTGSVVKQRVA 727

Query: 370 -WWKGYGICSSLGKSRYSCGAFVADEERMLSIFFGSDLKEGISWDEFAVLATFLWGLWNA 429
             WK     S  G  + +  A +    ++  I                V+    +G   A
Sbjct: 728 PKWKP----SPSGSYKINTDATLDCRAKVTGI---------------GVVIRDCYGHVMA 787

Query: 430 QNRLRLQGLVPTSDIGPWALHGSGYCGSGLPWQRSAIDGKVHRGCALSVDLVEGLAATEG 489
                  GL                                     L    VE +A   G
Sbjct: 788 SLCQSFPGL-------------------------------------LQPQTVEAVAVLRG 847

Query: 490 VRLCSESGCRPFHLETDSSRIFQLLQGDVEDLSEVGMVTSSLRQHLSSVGFPSF-FTLRE 549
            RL  E+G  P  +E+DS  +  L+       +E+G+V   +    S+  F S  F  R 
Sbjct: 848 FRLALEAGLCPASIESDSLSVVNLINSMDILRAEIGVVLHDILAMGSNSFFSSVSFVPRL 857

Query: 550 VNQAADCLAKLALQNRWNQVWVEDYPKELSSFLV 566
            N  A  LAKL+L      VW+ED P  + S ++
Sbjct: 908 TNCVAHSLAKLSLSFEGEHVWLEDCPLAVESLVL 857

BLAST of Lag0022057 vs. ExPASy TrEMBL
Match: A0A2N9EV35 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6577 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.2e-56
Identity = 113/260 (43.46%), Postives = 162/260 (62.31%), Query Frame = 0

Query: 3   LLFWNARGLGSPQAFRRLYNLVQSHKPQMVFLTETKMCGSRMNSIKIQLGFQNCFSVDCC 62
           LL WN RGLG+P A R L+ +V++  P ++FL ETK+    M  ++++LG+ N F+V   
Sbjct: 472 LLSWNCRGLGNPFAVRSLHYVVKTQGPGVLFLMETKLGVEGMEGLRVKLGYSNVFTVPSH 531

Query: 63  GRSGGLSLFWSAEIGFSLLSFSKNHIDGWVDW-DSKNWRFTGFYGNPQTELRYLSWALLK 122
           GRSGGL+L W+ +I  ++ +F+ NHID  V+  D K WR T F G P+ + ++ SWALL 
Sbjct: 532 GRSGGLALLWNNQIQLTIQNFTSNHIDSHVEMSDGKLWRLTSFCGRPEDQCKWESWALLD 591

Query: 123 NLCGNTSTPWLVGGDFNGILFQHEKQGGRDKSEAELNDFRASLDDCGLMDVGFTGDIFTW 182
           +L    + PWL  GDFN I+ Q+EK+G   +S A++  FR   + C L+D+GF+G  FTW
Sbjct: 592 HLNKLENIPWLCFGDFNEIMVQNEKRGRYPRSLAKMCAFREVANRCNLLDMGFSGYEFTW 651

Query: 183 TNERPGEENVKERLDRICVTEGWKDLFPDCSIDHLPFNRSDHRPILLTLVRFTGLRGARR 242
            N R G  NV+ER+DR   +  W + FP+  + HLP   SDH PIL+ + +       RR
Sbjct: 652 DNNRDGMANVQERIDRAFASPTWSNWFPNSHVSHLPVFSSDHLPILVEVGQHVSAL-PRR 711

Query: 243 GRIHRFEEAWNRLPECSEIV 262
            + HRFEE W   PEC EI+
Sbjct: 712 KKPHRFEEKWIANPECEEII 730

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF5449841.15.0e-6247.17hypothetical protein F2P56_030246 [Juglans regia][more]
KAF7824053.11.7e-5737.91hypothetical protein G2W53_022197 [Senna tora][more]
XP_024036939.11.7e-5743.02uncharacterized protein LOC112096938 [Citrus clementina][more]
XP_012857846.11.7e-5742.97PREDICTED: uncharacterized protein LOC105977118 [Erythranthe guttata][more]
XP_012851712.12.2e-5742.97PREDICTED: uncharacterized protein LOC105971405 [Erythranthe guttata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9EWI93.6e-5838.66Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9G8I64.7e-5842.37Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9IBI94.7e-5842.37Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A5C7IIT42.3e-5731.71Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1[more]
A0A2N9EV351.2e-5643.46Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6577 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 459..543
e-value: 9.9E-10
score: 38.3
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 6..223
e-value: 1.2E-5
score: 25.1
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 1..230
e-value: 5.7E-37
score: 129.7
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..230
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 100..252
NoneNo IPR availablePANTHERPTHR33116:SF39RETROTRANSPOSON, UNCLASSIFIED-LIKE PROTEINcoord: 100..252

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0022057.1Lag0022057.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
molecular_function GO:0003824 catalytic activity