Lag0021939 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACAACATTCTTCCTGCGACGACAACGTTTCACGAACGGCGAGTGGTGCGAGTTCCTTCCTGCGGCGACAACATTTCATGAACGACGGCGACACCGTTTTACCATATCTGGGCTTCTTGCGGCGATGGCGTTTCACGAATGGCAGAAACAACGTTTTACCAGATCTGGGCTTCTCCCAGCAAAAGAATTTCATGACCAAAACTTGAATGAGAAGCTTTTTTCGGTAGGTGGCAAGGAGACTCTTATCAAGGCTGTTATTCAATCAATCCCTACATACACAATGAGTTGCTTCCAACTCCCCAAGGGCTTGTGTGATGATATCAACAAGCCGTGTGCTAAATTTTGGTGGGGAACGGTTGGGGATCAGAAGAAAATTCACTAG ATGGCGACAACATTCTTCCTGCGACGACAACGTTTCACGAACGGCGAGTGGTGCGAGTTCCTTCCTGCGGCGACAACATTTCATGAACGACGGCGACACCGTTTTACCATATCTGGGCTTCTTGCGGCGATGGCGTTTCACGAATGGCAGAAACAACGTTTTACCAGATCTGGGCTTCTCCCAGCAAAAGAATTTCATGACCAAAACTTGAATGAGAAGCTTTTTTCGGTAGGTGGCAAGGAGACTCTTATCAAGGCTGTTATTCAATCAATCCCTACATACACAATGAGTTGCTTCCAACTCCCCAAGGGCTTGTGTGATGATATCAACAAGCCGTGTGCTAAATTTTGGTGGGGAACGGTTGGGGATCAGAAGAAAATTCACTAG ATGGCGACAACATTCTTCCTGCGACGACAACGTTTCACGAACGGCGAGTGGTGCGAGTTCCTTCCTGCGGCGACAACATTTCATGAACGACGGCGACACCGTTTTACCATATCTGGGCTTCTTGCGGCGATGGCGTTTCACGAATGGCAGAAACAACGTTTTACCAGATCTGGGCTTCTCCCAGCAAAAGAATTTCATGACCAAAACTTGAATGAGAAGCTTTTTTCGGTAGGTGGCAAGGAGACTCTTATCAAGGCTGTTATTCAATCAATCCCTACATACACAATGAGTTGCTTCCAACTCCCCAAGGGCTTGTGTGATGATATCAACAAGCCGTGTGCTAAATTTTGGTGGGGAACGGTTGGGGATCAGAAGAAAATTCACTAG MATTFFLRRQRFTNGEWCEFLPAATTFHERRRHRFTISGLLAAMAFHEWQKQRFTRSGLLPAKEFHDQNLNEKLFSVGGKETLIKAVIQSIPTYTMSCFQLPKGLCDDINKPCAKFWWGTVGDQKKIH Homology
BLAST of Lag0021939 vs. NCBI nr
Match: XP_030479133.1 (uncharacterized protein LOC115696372 [Cannabis sativa]) HSP 1 Score: 93.6 bits (231), Expect = 1.3e-15 Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of Lag0021939 vs. NCBI nr
Match: XP_030936037.1 (uncharacterized protein LOC115961146 [Quercus lobata]) HSP 1 Score: 91.3 bits (225), Expect = 6.6e-15 Identity = 39/61 (63.93%), Postives = 45/61 (73.77%), Query Frame = 0
BLAST of Lag0021939 vs. NCBI nr
Match: XP_030509046.1 (uncharacterized protein LOC115723707 [Cannabis sativa]) HSP 1 Score: 90.9 bits (224), Expect = 8.7e-15 Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of Lag0021939 vs. NCBI nr
Match: XP_030483769.1 (uncharacterized protein LOC115700339 [Cannabis sativa]) HSP 1 Score: 90.1 bits (222), Expect = 1.5e-14 Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 0
BLAST of Lag0021939 vs. NCBI nr
Match: XP_030483228.1 (uncharacterized protein LOC115699823 [Cannabis sativa]) HSP 1 Score: 89.7 bits (221), Expect = 1.9e-14 Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 0
BLAST of Lag0021939 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.3e-05 Identity = 21/57 (36.84%), Postives = 35/57 (61.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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