Lag0021924 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCGACAACAATCTCCTGACTTTTCAAAATGGTGCATCTATCGAGTTCCCAAACGACTACTAAGCCTGGATTGTAAAGCTTATAGGCCAGAAGTCATTTCCATTGGCCCTTTTCACCATGGTCAAAAGGATTTGATGGGCACAGAACAACTTAAACTCCTATGTCTCAATAGTTATCTACACCGTATAAATATGAGTGTTGAGGATGTGGTGGCGAAGGCTCGAAATTGGGAGAGTAAAGCTCGTAGTTGCTATGCAGAACACATAAACATGAACAGTGACGATTTTGTGAAAATGTTGCTCATGGATGGCTGTTTCATAGTGGAGGCTCTAATAATAGTATAA ATGCTTCGACAACAATCTCCTGACTTTTCAAAATGGTGCATCTATCGAGTTCCCAAACGACTACTAAGCCTGGATTGTAAAGCTTATAGGCCAGAAGTCATTTCCATTGGCCCTTTTCACCATGGTCAAAAGGATTTGATGGGCACAGAACAACTTAAACTCCTATGTCTCAATAGTTATCTACACCGTATAAATATGAGTGTTGAGGATGTGGTGGCGAAGGCTCGAAATTGGGAGAGTAAAGCTCGTAGTTGCTATGCAGAACACATAAACATGAACAGTGACGATTTTGTGAAAATGTTGCTCATGGATGGCTGTTTCATAGTGGAGGCTCTAATAATAGTATAA ATGCTTCGACAACAATCTCCTGACTTTTCAAAATGGTGCATCTATCGAGTTCCCAAACGACTACTAAGCCTGGATTGTAAAGCTTATAGGCCAGAAGTCATTTCCATTGGCCCTTTTCACCATGGTCAAAAGGATTTGATGGGCACAGAACAACTTAAACTCCTATGTCTCAATAGTTATCTACACCGTATAAATATGAGTGTTGAGGATGTGGTGGCGAAGGCTCGAAATTGGGAGAGTAAAGCTCGTAGTTGCTATGCAGAACACATAAACATGAACAGTGACGATTTTGTGAAAATGTTGCTCATGGATGGCTGTTTCATAGTGGAGGCTCTAATAATAGTATAA MLRQQSPDFSKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFIVEALIIV Homology
BLAST of Lag0021924 vs. NCBI nr
Match: XP_022132118.1 (UPF0481 protein At3g47200-like [Momordica charantia]) HSP 1 Score: 141.4 bits (355), Expect = 5.0e-30 Identity = 68/116 (58.62%), Postives = 85/116 (73.28%), Query Frame = 0
BLAST of Lag0021924 vs. NCBI nr
Match: XP_022158990.1 (UPF0481 protein At3g47200-like isoform X2 [Momordica charantia]) HSP 1 Score: 134.0 bits (336), Expect = 8.0e-28 Identity = 63/113 (55.75%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of Lag0021924 vs. NCBI nr
Match: XP_022158992.1 (UPF0481 protein At3g47200-like isoform X3 [Momordica charantia]) HSP 1 Score: 134.0 bits (336), Expect = 8.0e-28 Identity = 63/113 (55.75%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of Lag0021924 vs. NCBI nr
Match: XP_022158989.1 (UPF0481 protein At3g47200-like isoform X1 [Momordica charantia]) HSP 1 Score: 134.0 bits (336), Expect = 8.0e-28 Identity = 63/113 (55.75%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of Lag0021924 vs. NCBI nr
Match: XP_022131634.1 (UPF0481 protein At3g47200-like [Momordica charantia]) HSP 1 Score: 133.3 bits (334), Expect = 1.4e-27 Identity = 64/102 (62.75%), Postives = 81/102 (79.41%), Query Frame = 0
BLAST of Lag0021924 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 7.6e-13 Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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