Lag0021867 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0021867
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr7: 13222871 .. 13224016 (+)
RNA-Seq ExpressionLag0021867
SyntenyLag0021867
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGCCTTGGAGTTGGGATGTTTGGCCTTGGCATGACGATGCGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCCAAGAAATTTCCGAGCATCTCTTCAAGCTATCACGGTCATCCCAGGGGTCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGCTTGGGGAGGCCAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGCTTGGGGAGGCCTAGGAAATTCCCGGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCGTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGCTGTATTCATCCCGAGGGTGCATACACTCAGTCGGGGGAAGTGCGGAAGTCTGGCCACACGCGTTACCTCCTATGGAAAAAGCACTTTATGCGAAACACAATGCAAAAAACTTCATTAAATTCGCAAGTGTCGACATCGTACCACGAAGAAGCGCCATGGACATGTGTTATACAAAACGGAAGGAAAATCAAAACTGTCGCCACGTGA

mRNA sequence

ATGGTTGGCCTTGGAGTTGGGATGTTTGGCCTTGGCATGACGATGCGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCCAAGAAATTTCCGAGCATCTCTTCAAGCTATCACGGTCATCCCAGGGGTCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGCTTGGGGAGGCCAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGCTTGGGGAGGCCTAGGAAATTCCCGGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCGTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGCTGTATTCATCCCGAGGGTGCATACACTCAGTCGGGGGAAGTGCGGAAGTCTGGCCACACGCGTTACCTCCTATGGAAAAAGCACTTTATGCGAAACACAATGCAAAAAACTTCATTAAATTCGCAAGTGTCGACATCGTACCACGAAGAAGCGCCATGGACATGTGTTATACAAAACGGAAGGAAAATCAAAACTGTCGCCACGTGA

Coding sequence (CDS)

ATGGTTGGCCTTGGAGTTGGGATGTTTGGCCTTGGCATGACGATGCGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCCAAGAAATTTCCGAGCATCTCTTCAAGCTATCACGGTCATCCCAGGGGTCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGCTTGGGGAGGCCAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGCTTGGGGAGGCCTAGGAAATTCCCGGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCGTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGCTGTATTCATCCCGAGGGTGCATACACTCAGTCGGGGGAAGTGCGGAAGTCTGGCCACACGCGTTACCTCCTATGGAAAAAGCACTTTATGCGAAACACAATGCAAAAAACTTCATTAAATTCGCAAGTGTCGACATCGTACCACGAAGAAGCGCCATGGACATGTGTTATACAAAACGGAAGGAAAATCAAAACTGTCGCCACGTGA

Protein sequence

MVGLGVGMFGLGMTMRTLFWGKGLGRPKKFPSISSSYHGHPRGRTLFWGKAWGGLGNSRASLQAVMVIPGVRTLFWGKLGEARKFPSLSSSVMVIPGVRTLFWGKAWGGQGNSRASLQASWSSQGCVHSSGESLGRPRKFPSLSSSCCSHPRGAYTLLGKAWGGLGNSRPLFKRHGHPRGAYTLLGKGLGRPRKFPSLSSSVMVIPGVRTLFWGKAWGGQEIPEPLFKRHGHPRGAYTLLGKSLGRPRKFPSLSSSCCSHPRGAYTRLGKGLGRPRKFPSLSSSCCSHPRGAYTLLGKGLGRPRKFPSLSSSCCIHPEGAYTQSGEVRKSGHTRYLLWKKHFMRNTMQKTSLNSQVSTSYHEEAPWTCVIQNGRKIKTVAT
Homology
The following BLAST results are available for this feature:
BLAST of Lag0021867 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0021867 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0021867 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0021867 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017956AT hook, DNA-binding motifSMARTSM00384AT_hook_2coord: 186..198
e-value: 3.1
score: 12.5
coord: 241..253
e-value: 11.0
score: 9.4
coord: 297..309
e-value: 3.1
score: 12.5
coord: 21..33
e-value: 5.4
score: 11.1
coord: 131..143
e-value: 250.0
score: 1.7
coord: 269..281
e-value: 3.1
score: 12.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0021867.1Lag0021867.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding