Lag0021783 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0021783
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr7: 12003229 .. 12004746 (-)
RNA-Seq ExpressionLag0021783
SyntenyLag0021783
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTGCAGTGGGGAAACAAAGAAGATCACGAGACAGTTGGGAGAGTTGAAAGTCACAGAGGCAGAGAGGGCATGCGTATATCGTCTACAAGGAGGGGACATCGACAAAACAAACCAGAAACTAGAGAATGCCATCCTGTGCAAAATTTTCACGACGAAGAAGATCAATCCAAAGATCTTCAGTTCCAAAATGCCAAAGATATGGAACCAAGAACACACGTTGATCTCTTGTGTGGGATTCAACCTTTTTGTGTGCAAGTTTAGAAACGCAAGAGTTAAAGGCAAAATAATGGAGGACGGACCGTGGTTTTTCGACAAGGCAATGATTCTGATGGAGGAACCCAAAGGAGATAACTGTGGAGAAGAAAAAGATTTCAGGTATGTCTCCTTCTGGACTCATTTTCATAAACTTCCTTTCGCTTGTTTTTCTAGGGATGCGGCAATGGAAATTGGCAGCTTCTTGGGGAAGGTGGAACACATTGATCTGGGGAAAGAGAAAGAACAACAATGGAAAAGTTCTCTCCGCATCAAGATTCAGATTGAGGTCAATATGCCACTGAAAAGGGGCATATTTTTAAAATCAGAAAGGGGAAATAATGATCGTTGGATTAAAGTCACGTATGAGAAATTGTCGGATTTCTGCTACGGATGTGGTCTTTTGGGGCATACTCTTAAAGAATGTGGTGAAGACTGTGGTTCTAACGAGGATGAACTCCCTTACGGATCATGGCTCAGGGAGCCAACGAGACTTCTCTCTTATGATTACACTCCGACGGATATAGTGGATGGCTATGGTCGGGGGAGAGGGAGAGGAAGGGTTGGTGGTGGCCGAGGAAATTGGTACAGTGAAGAGGTAGTGGACCAGGAAGAGGCTGATGGAACTCCTCCATGGTCGAGCAAGTCTTCGTCCTCAACAACCGACGAACAGATCGGAATCCACTGGAGATCAGAACCGGATCCAACGCTGGCAAAATCTGTAACGGTTGAATTACATAAGGAAAAAACGGATAATCTGCACGGTCAATGTAAAGAAGGCGAGAATGGAGGAAAAGAGGAAATTGGAACCGCCAGAGGGGAAAATCTGCAAGGTCAATTTAAAGATGGCGAGATTTTAGGAAAGGTGAAAGCTGTCATTGCCAGAGGGGAGATCTCATCAGTCCAAACGGATCAAAAGGGAGACGACTTTCCTTCTATGGAAATCAATAAAATCTCGTGTGGGCTGATGGAGAAAAGTGAATGTAATGAAATAAACGTCTCTCAGGACAGTTGGCAAATACAACAGGAAGCCCAGGAAGTTAGTTCCAGCCAAAAGGCCCAAACTGACGGAGAAATGAAGGAGGTTGGTGGGCTGCAATCAGTCGAGATTGATAAGTCACAGAATCATGGAGATTTTAAAAAAAACGATGCATGGAGGAAGCCCAGAGGGTGGAAAAGAATGGCAAGAATGAAGGATTCAATGGAGTACCAGGCGACGCAAGGCTGTATGCAAGCAAAATCACAGGGAGAAAACGAGTGA

mRNA sequence

ATGGATTGCAGTGGGGAAACAAAGAAGATCACGAGACAGTTGGGAGAGTTGAAAGTCACAGAGGCAGAGAGGGCATGCGTATATCGTCTACAAGGAGGGGACATCGACAAAACAAACCAGAAACTAGAGAATGCCATCCTGTGCAAAATTTTCACGACGAAGAAGATCAATCCAAAGATCTTCAGTTCCAAAATGCCAAAGATATGGAACCAAGAACACACGTTGATCTCTTGTGTGGGATTCAACCTTTTTGTGTGCAAGTTTAGAAACGCAAGAGTTAAAGGCAAAATAATGGAGGACGGACCGTGGTTTTTCGACAAGGCAATGATTCTGATGGAGGAACCCAAAGGAGATAACTGTGGAGAAGAAAAAGATTTCAGGTATGTCTCCTTCTGGACTCATTTTCATAAACTTCCTTTCGCTTGTTTTTCTAGGGATGCGGCAATGGAAATTGGCAGCTTCTTGGGGAAGGTGGAACACATTGATCTGGGGAAAGAGAAAGAACAACAATGGAAAAGTTCTCTCCGCATCAAGATTCAGATTGAGGTCAATATGCCACTGAAAAGGGGCATATTTTTAAAATCAGAAAGGGGAAATAATGATCGTTGGATTAAAGTCACGTATGAGAAATTGTCGGATTTCTGCTACGGATGTGGTCTTTTGGGGCATACTCTTAAAGAATGTGGTGAAGACTGTGGTTCTAACGAGGATGAACTCCCTTACGGATCATGGCTCAGGGAGCCAACGAGACTTCTCTCTTATGATTACACTCCGACGGATATAGTGGATGGCTATGGTCGGGGGAGAGGGAGAGGAAGGGTTGGTGGTGGCCGAGGAAATTGGTACAGTGAAGAGGTAGTGGACCAGGAAGAGGCTGATGGAACTCCTCCATGGTCGAGCAAGTCTTCGTCCTCAACAACCGACGAACAGATCGGAATCCACTGGAGATCAGAACCGGATCCAACGCTGGCAAAATCTGTAACGGTTGAATTACATAAGGAAAAAACGGATAATCTGCACGGTCAATGTAAAGAAGGCGAGAATGGAGGAAAAGAGGAAATTGGAACCGCCAGAGGGGAAAATCTGCAAGGTCAATTTAAAGATGGCGAGATTTTAGGAAAGGTGAAAGCTGTCATTGCCAGAGGGGAGATCTCATCAGTCCAAACGGATCAAAAGGGAGACGACTTTCCTTCTATGGAAATCAATAAAATCTCGTGTGGGCTGATGGAGAAAAGTGAATGTAATGAAATAAACGTCTCTCAGGACAGTTGGCAAATACAACAGGAAGCCCAGGAAGTTAGTTCCAGCCAAAAGGCCCAAACTGACGGAGAAATGAAGGAGGTTGGTGGGCTGCAATCAGTCGAGATTGATAAGTCACAGAATCATGGAGATTTTAAAAAAAACGATGCATGGAGGAAGCCCAGAGGGTGGAAAAGAATGGCAAGAATGAAGGATTCAATGGAGTACCAGGCGACGCAAGGCTGTATGCAAGCAAAATCACAGGGAGAAAACGAGTGA

Coding sequence (CDS)

ATGGATTGCAGTGGGGAAACAAAGAAGATCACGAGACAGTTGGGAGAGTTGAAAGTCACAGAGGCAGAGAGGGCATGCGTATATCGTCTACAAGGAGGGGACATCGACAAAACAAACCAGAAACTAGAGAATGCCATCCTGTGCAAAATTTTCACGACGAAGAAGATCAATCCAAAGATCTTCAGTTCCAAAATGCCAAAGATATGGAACCAAGAACACACGTTGATCTCTTGTGTGGGATTCAACCTTTTTGTGTGCAAGTTTAGAAACGCAAGAGTTAAAGGCAAAATAATGGAGGACGGACCGTGGTTTTTCGACAAGGCAATGATTCTGATGGAGGAACCCAAAGGAGATAACTGTGGAGAAGAAAAAGATTTCAGGTATGTCTCCTTCTGGACTCATTTTCATAAACTTCCTTTCGCTTGTTTTTCTAGGGATGCGGCAATGGAAATTGGCAGCTTCTTGGGGAAGGTGGAACACATTGATCTGGGGAAAGAGAAAGAACAACAATGGAAAAGTTCTCTCCGCATCAAGATTCAGATTGAGGTCAATATGCCACTGAAAAGGGGCATATTTTTAAAATCAGAAAGGGGAAATAATGATCGTTGGATTAAAGTCACGTATGAGAAATTGTCGGATTTCTGCTACGGATGTGGTCTTTTGGGGCATACTCTTAAAGAATGTGGTGAAGACTGTGGTTCTAACGAGGATGAACTCCCTTACGGATCATGGCTCAGGGAGCCAACGAGACTTCTCTCTTATGATTACACTCCGACGGATATAGTGGATGGCTATGGTCGGGGGAGAGGGAGAGGAAGGGTTGGTGGTGGCCGAGGAAATTGGTACAGTGAAGAGGTAGTGGACCAGGAAGAGGCTGATGGAACTCCTCCATGGTCGAGCAAGTCTTCGTCCTCAACAACCGACGAACAGATCGGAATCCACTGGAGATCAGAACCGGATCCAACGCTGGCAAAATCTGTAACGGTTGAATTACATAAGGAAAAAACGGATAATCTGCACGGTCAATGTAAAGAAGGCGAGAATGGAGGAAAAGAGGAAATTGGAACCGCCAGAGGGGAAAATCTGCAAGGTCAATTTAAAGATGGCGAGATTTTAGGAAAGGTGAAAGCTGTCATTGCCAGAGGGGAGATCTCATCAGTCCAAACGGATCAAAAGGGAGACGACTTTCCTTCTATGGAAATCAATAAAATCTCGTGTGGGCTGATGGAGAAAAGTGAATGTAATGAAATAAACGTCTCTCAGGACAGTTGGCAAATACAACAGGAAGCCCAGGAAGTTAGTTCCAGCCAAAAGGCCCAAACTGACGGAGAAATGAAGGAGGTTGGTGGGCTGCAATCAGTCGAGATTGATAAGTCACAGAATCATGGAGATTTTAAAAAAAACGATGCATGGAGGAAGCCCAGAGGGTGGAAAAGAATGGCAAGAATGAAGGATTCAATGGAGTACCAGGCGACGCAAGGCTGTATGCAAGCAAAATCACAGGGAGAAAACGAGTGA

Protein sequence

MDCSGETKKITRQLGELKVTEAERACVYRLQGGDIDKTNQKLENAILCKIFTTKKINPKIFSSKMPKIWNQEHTLISCVGFNLFVCKFRNARVKGKIMEDGPWFFDKAMILMEEPKGDNCGEEKDFRYVSFWTHFHKLPFACFSRDAAMEIGSFLGKVEHIDLGKEKEQQWKSSLRIKIQIEVNMPLKRGIFLKSERGNNDRWIKVTYEKLSDFCYGCGLLGHTLKECGEDCGSNEDELPYGSWLREPTRLLSYDYTPTDIVDGYGRGRGRGRVGGGRGNWYSEEVVDQEEADGTPPWSSKSSSSTTDEQIGIHWRSEPDPTLAKSVTVELHKEKTDNLHGQCKEGENGGKEEIGTARGENLQGQFKDGEILGKVKAVIARGEISSVQTDQKGDDFPSMEINKISCGLMEKSECNEINVSQDSWQIQQEAQEVSSSQKAQTDGEMKEVGGLQSVEIDKSQNHGDFKKNDAWRKPRGWKRMARMKDSMEYQATQGCMQAKSQGENE
Homology
BLAST of Lag0021783 vs. NCBI nr
Match: XP_015380691.1 (uncharacterized protein LOC107174364 [Citrus sinensis])

HSP 1 Score: 159.5 bits (402), Expect = 7.8e-35
Identity = 70/206 (33.98%), Postives = 120/206 (58.25%), Query Frame = 0

Query: 42  LENAILCKIFTTKKINPKIFSSKMPKIWNQ-EHTLISCVGFNLFVCKFRNARVKGKIMED 101
           L   ++ K+  T+ +N + F S + ++W   +   I  +G N F+ KF     K +++  
Sbjct: 15  LARCLVGKVLLTRAVNKEGFKSALQQVWRTVKEVKIESLGNNCFMFKFTEEADKKRVLTG 74

Query: 102 GPWFFDKAMILMEEPKGDNCGEEKDFRYVSFWTHFHKLPFACFSRDAAMEIGSFLGKVEH 161
           GPW FD+A++++ EPKG     ++ F + +FW     +P AC  ++   E+G  +G VE 
Sbjct: 75  GPWHFDRALLVLTEPKGIGELTKQSFTHTAFWIQIRNVPIACMEKELIQELGGMIGAVEE 134

Query: 162 IDLGKEKEQQWKSSLRIKIQIEVNMPLKRGIFLKSERGNNDRWIKVTYEKLSDFCYGCGL 221
           I+  +  E   + + RI++ I + +PLK+ +FLK E G +D  + V YE+L DFCY CG+
Sbjct: 135 IETDENGECLGEFA-RIRVLINITLPLKKILFLKQE-GESDIQMPVVYERLPDFCYCCGI 194

Query: 222 LGHTLKECGEDCGSNEDELPYGSWLR 247
           +GH  KEC +  G  +++LPYG W++
Sbjct: 195 IGHQYKECAKFQGQQKEQLPYGGWMK 218

BLAST of Lag0021783 vs. NCBI nr
Match: TXG72737.1 (hypothetical protein EZV62_001316 [Acer yangbiense])

HSP 1 Score: 158.3 bits (399), Expect = 1.7e-34
Identity = 83/223 (37.22%), Postives = 133/223 (59.64%), Query Frame = 0

Query: 33  GDIDKT-NQKLENAILCKIFTTKKINPKIFSSKMPKIW-NQEHTLISCVGFNLFVCKFRN 92
           GD+ +T ++K+ ++++ KI TTK IN + F S +PK+W   E   I+ +G N+FV +FRN
Sbjct: 69  GDVKRTSDRKVAHSLVGKILTTKPINREAFISWIPKLWRTSEPFEINAMGRNIFVLRFRN 128

Query: 93  ARVKGKIMEDGPWFFDKAMILMEEPKGDNCGEEKDFRYVSFWTHFHKLPFACFSRDAAME 152
           +  K +++  GPW F+ ++I +EEPKG    ++ +F  VSF    H LP  C +++A + 
Sbjct: 129 SEDKRRVLSGGPWCFNDSIIALEEPKGMGKFQDLEFCRVSFRVQLHNLPLLCMNQEAGLA 188

Query: 153 IGSFLGKVEHIDLGKEKEQQWKSSLRIKIQIEVNMPLKRGIFLKSERGNNDRWIKVTYEK 212
           +G  L +VE IDLG   +   K  LRI + I+++ PLKR + +  E  +    I V YE 
Sbjct: 189 LGRMLERVEEIDLGYLGDYLDK-FLRIHVNIDISQPLKRALKVGVEDSDEIATIVVHYEC 248

Query: 213 LSDFCYGCGLLGHTLKECGEDCGSNEDELP--YGSWLREPTRL 252
           L + C+  G+LGH L+EC     S ++  P  YG+W+R  T +
Sbjct: 249 LPELCFHYGILGHPLQECPSRHPSEDEGRPLKYGAWIRAGTTI 290

BLAST of Lag0021783 vs. NCBI nr
Match: XP_024033132.1 (uncharacterized protein LOC112095437 [Citrus clementina])

HSP 1 Score: 157.1 bits (396), Expect = 3.9e-34
Identity = 77/242 (31.82%), Postives = 134/242 (55.37%), Query Frame = 0

Query: 6   ETKKITRQLGELKVTEAERACVYRLQGGDIDKTNQKLENAILCKIFTTKKINPKIFSSKM 65
           ET+++ R+   + + E E A  +   G   +K ++ +   ++ KI   + +N +   + +
Sbjct: 2   ETEELIRKCQAITL-EGEEADKFIFAGQMKEKGSKAVAGCLVGKILLARGVNREGLKTAL 61

Query: 66  PKIWNQEHTL-ISCVGFNLFVCKFRNARVKGKIMEDGPWFFDKAMILMEEPKGDNCGEEK 125
            + W   H   +  +G N+FV KF +   K ++   GPW FD+A+++++EPKG    +++
Sbjct: 62  DQAWRTVHDFKVESLGSNIFVFKFLSEADKKRVFNGGPWHFDRALMVLQEPKGIGSIKKQ 121

Query: 126 DFRYVSFWTHFHKLPFACFSRDAAMEIGSFLGKVEHIDLGKEKEQQWKSSLRIKIQIEVN 185
            F +VSFW   H +P  C       E+GS +GKVE I +  + E  +   +RI++ + + 
Sbjct: 122 SFSHVSFWIRIHNVPLMCMDTSIIRELGSRVGKVEDIGMDAQGE-CFGEFVRIQVSVNIT 181

Query: 186 MPLKRGIFLKSERGNNDRWIKVTYEKLSDFCYGCGLLGHTLKECGEDCGSNEDELPYGSW 245
            PLK+ I LK E  + D  + V YE+L DFC+ CG +GH  +EC E  G  ++ LP+G W
Sbjct: 182 KPLKKLIVLKQE-DDEDIPLPVVYERLPDFCFCCGCIGHQFRECMEYKGQQKENLPFGPW 240

Query: 246 LR 247
           L+
Sbjct: 242 LK 240

BLAST of Lag0021783 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-33
Identity = 82/250 (32.80%), Postives = 134/250 (53.60%), Query Frame = 0

Query: 38  TNQKLENAILCKIFTTKKINPKIFSSKMPKIWN-QEHTLISCVGFNLFVCKFRNARVKGK 97
           T   ++  ++ K+ T+K+I+ +   S M  +W     T    +G N++V  F++   K +
Sbjct: 31  TADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSR 90

Query: 98  IMEDGPWFFDKAMILMEEPKGDNCGEEKDFRYVSFWTHFHKLPFACFSRDAAMEIGSFLG 157
           ++  GPW F+K+++++  P   N   + +F + +FW   H +PF C S + A  +G+ LG
Sbjct: 91  VLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLG 150

Query: 158 KVEHIDLGKEKEQQWKSSLRIKIQIEVNMPLKRGIFLKSERGNNDRWIKVTYEKLSDFCY 217
            VE I+ G   +      +R++++I+V+ PL+RGI LK+  G  D W  + YEKL DFCY
Sbjct: 151 DVEEIE-GDGADGWAGPFIRVRVKIDVSKPLRRGIKLKNSDG-KDIWCPLRYEKLPDFCY 210

Query: 218 GCGLLGHTLKECGEDCGSNEDELP--YGSWLREPTRLLSYDYTPTDIVDGYGR-GRGRGR 277
            CG +GH+ +EC +         P  YG WLR      S  +   ++    GR GRG   
Sbjct: 211 ECGKIGHSGRECEQRSKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQV 270

Query: 278 VG--GGRGNW 282
            G  GGRG+W
Sbjct: 271 NGGRGGRGDW 278

BLAST of Lag0021783 vs. NCBI nr
Match: XP_024042073.1 (uncharacterized protein LOC112099188 [Citrus clementina])

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-33
Identity = 73/242 (30.17%), Postives = 131/242 (54.13%), Query Frame = 0

Query: 6   ETKKITRQLGELKVTEAERACVYRLQGGDIDKTNQKLENAILCKIFTTKKINPKIFSSKM 65
           +T+++ R+   + + E +++ +  L     D+  Q L   ++ KI  ++ +N +     +
Sbjct: 2   DTEELIRKCKAITIREEDKSKL-SLVVNMKDQREQVLAGCLMGKIILSRGVNREGLKIAL 61

Query: 66  PKIWNQ-EHTLISCVGFNLFVCKFRNARVKGKIMEDGPWFFDKAMILMEEPKGDNCGEEK 125
            ++W   +   I  +G N+F+ KF     K +++  GPW FD+A+I++ +PKG     ++
Sbjct: 62  QQVWQTFKEVKIESLGNNIFMFKFAEEADKRRVLSGGPWHFDRALIVLTKPKGIGEVSKQ 121

Query: 126 DFRYVSFWTHFHKLPFACFSRDAAMEIGSFLGKVEHIDLGKEKEQQWKSSLRIKIQIEVN 185
           DF ++ FW   H +P AC  RD   E+G  + KVE ++   E    +    R++I I + 
Sbjct: 122 DFTHIPFWVQIHNIPIACMERDFLQELGGIIRKVEEVET-DENGDCFGEFARLRISINIT 181

Query: 186 MPLKRGIFLKSERGNNDRWIKVTYEKLSDFCYGCGLLGHTLKECGEDCGSNEDELPYGSW 245
            PLK  +FLK E G  D  + V YE+L DFC+ CG++ H  KEC +  G  ++E  +G W
Sbjct: 182 QPLKEILFLKQE-GETDIPMPVVYERLPDFCFSCGIISHQFKECAQYQGQPKEEFSFGMW 240

Query: 246 LR 247
           ++
Sbjct: 242 MK 240

BLAST of Lag0021783 vs. ExPASy TrEMBL
Match: A0A5C7ITT0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001316 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.4e-35
Identity = 83/223 (37.22%), Postives = 133/223 (59.64%), Query Frame = 0

Query: 33  GDIDKT-NQKLENAILCKIFTTKKINPKIFSSKMPKIW-NQEHTLISCVGFNLFVCKFRN 92
           GD+ +T ++K+ ++++ KI TTK IN + F S +PK+W   E   I+ +G N+FV +FRN
Sbjct: 69  GDVKRTSDRKVAHSLVGKILTTKPINREAFISWIPKLWRTSEPFEINAMGRNIFVLRFRN 128

Query: 93  ARVKGKIMEDGPWFFDKAMILMEEPKGDNCGEEKDFRYVSFWTHFHKLPFACFSRDAAME 152
           +  K +++  GPW F+ ++I +EEPKG    ++ +F  VSF    H LP  C +++A + 
Sbjct: 129 SEDKRRVLSGGPWCFNDSIIALEEPKGMGKFQDLEFCRVSFRVQLHNLPLLCMNQEAGLA 188

Query: 153 IGSFLGKVEHIDLGKEKEQQWKSSLRIKIQIEVNMPLKRGIFLKSERGNNDRWIKVTYEK 212
           +G  L +VE IDLG   +   K  LRI + I+++ PLKR + +  E  +    I V YE 
Sbjct: 189 LGRMLERVEEIDLGYLGDYLDK-FLRIHVNIDISQPLKRALKVGVEDSDEIATIVVHYEC 248

Query: 213 LSDFCYGCGLLGHTLKECGEDCGSNEDELP--YGSWLREPTRL 252
           L + C+  G+LGH L+EC     S ++  P  YG+W+R  T +
Sbjct: 249 LPELCFHYGILGHPLQECPSRHPSEDEGRPLKYGAWIRAGTTI 290

BLAST of Lag0021783 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.5e-34
Identity = 82/250 (32.80%), Postives = 134/250 (53.60%), Query Frame = 0

Query: 38  TNQKLENAILCKIFTTKKINPKIFSSKMPKIWN-QEHTLISCVGFNLFVCKFRNARVKGK 97
           T   ++  ++ K+ T+K+I+ +   S M  +W     T    +G N++V  F++   K +
Sbjct: 31  TADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSR 90

Query: 98  IMEDGPWFFDKAMILMEEPKGDNCGEEKDFRYVSFWTHFHKLPFACFSRDAAMEIGSFLG 157
           ++  GPW F+K+++++  P   N   + +F + +FW   H +PF C S + A  +G+ LG
Sbjct: 91  VLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLG 150

Query: 158 KVEHIDLGKEKEQQWKSSLRIKIQIEVNMPLKRGIFLKSERGNNDRWIKVTYEKLSDFCY 217
            VE I+ G   +      +R++++I+V+ PL+RGI LK+  G  D W  + YEKL DFCY
Sbjct: 151 DVEEIE-GDGADGWAGPFIRVRVKIDVSKPLRRGIKLKNSDG-KDIWCPLRYEKLPDFCY 210

Query: 218 GCGLLGHTLKECGEDCGSNEDELP--YGSWLREPTRLLSYDYTPTDIVDGYGR-GRGRGR 277
            CG +GH+ +EC +         P  YG WLR      S  +   ++    GR GRG   
Sbjct: 211 ECGKIGHSGRECEQRSKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQV 270

Query: 278 VG--GGRGNW 282
            G  GGRG+W
Sbjct: 271 NGGRGGRGDW 278

BLAST of Lag0021783 vs. ExPASy TrEMBL
Match: A0A5C7GU64 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027487 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.0e-33
Identity = 69/239 (28.87%), Postives = 126/239 (52.72%), Query Frame = 0

Query: 13  QLGELKVTEAERACVYRLQGGDIDKTNQKLENAILCKIFTTKKINPKIFSSKMPKIWNQ- 72
           QL E    E E A V+ +    I   ++ ++  ++ K+ T KK+N + F   + +IWNQ 
Sbjct: 8   QLYENLSLEDEDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIEQIWNQF 67

Query: 73  EHTLISCVGFNLFVCKFRNARVKGKIMEDGPWFFDKAMILMEEPKGDNCGEEKDFRYVSF 132
               +  VG N F+  F N   + K+   GPW F K++I++E+PKG     +  F    F
Sbjct: 68  GQVEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLKFNQADF 127

Query: 133 WTHFHKLPFACFSRDAAMEIGSFLGKVEHIDLGKEKEQQWKSSLRIKIQIEVNMPLKRGI 192
           W   H +P  C ++     +  ++G+V  +++  E  + W   +R+K+Q+++  PLKR +
Sbjct: 128 WVQIHDIPIMCMNQRTTKWLAEYIGEV--VEIPTESRECWGKYVRVKVQVDITKPLKRWL 187

Query: 193 FLKSERGNNDRWIKVTYEKLSDFCYGCGLLGHTLKECGED----CGSNEDELPYGSWLR 247
            +K  +      + + YE+L DFC+ CG +GH+++EC ++       +  +  +GSW+R
Sbjct: 188 RIKLGKYEEITMVALKYERLPDFCFACGRIGHSVRECLDEDAKRAALDGQQTKFGSWMR 244

BLAST of Lag0021783 vs. ExPASy TrEMBL
Match: A0A5E4G034 (PREDICTED: DUF4283 domain-containing OS=Prunus dulcis OX=3755 GN=ALMOND_2B021569 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.0e-33
Identity = 75/233 (32.19%), Postives = 128/233 (54.94%), Query Frame = 0

Query: 17  LKVTEAERACVYRLQGGDIDKTNQKLENAILCKIFTTKKINPKIFSSKMPKIWNQ-EHTL 76
           L +TE ER  + +++  DID   ++L+ +++ K+ TT   N + F   M KIW+     +
Sbjct: 12  LILTEDERDAI-QVRQNDIDDVGERLKMSLVGKVLTTTAFNREAFKQTMLKIWSTVREVV 71

Query: 77  ISCVGFNLFVCKFRNARVKGKIMEDGPWFFDKAMILMEEPKGDNCGEEKDFRYVSFWTHF 136
           +  +G NLF+  F     + +++  GPW FDKA++L+E P G     +   +Y  FW   
Sbjct: 72  VKDIGENLFLFIFATEGDRLRVLRSGPWNFDKALVLLETPDGSIAPSKMLLKYADFWIQV 131

Query: 137 HKLPFACFSRDAAMEIGSFLGKVEHIDLGKEKEQQWKSSLRIKIQIEVNMPLKRGIFLKS 196
           H +P +C S +   +IG+  G+   +  G + +   +  LR+++ ++V+ PL+RG  +  
Sbjct: 132 HNVPLSCMSTNLGRQIGNSFGRCLDVIEGMDGKCLGR-FLRLRVSVDVSKPLRRGKKMTL 191

Query: 197 ERGNNDRWIKVTYEKLSDFCYGCGLLGHTLKECG--EDCGSNEDELPYGSWLR 247
             GN   +++  YE+L +FC+ CG LGH  KEC   +      DE PYGSWL+
Sbjct: 192 PSGNT-VFVEFRYERLPEFCFCCGRLGHVFKECSFVDQAAKQADEKPYGSWLK 241

BLAST of Lag0021783 vs. ExPASy TrEMBL
Match: A0A1S8AC25 (CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-32
Identity = 79/234 (33.76%), Postives = 129/234 (55.13%), Query Frame = 0

Query: 42  LENAILCKIFTTKKINPKIFSSKMPKIWNQEHTL-ISCVGFNLFVCKFRNARVKGKIMED 101
           L   ++ K+  T++++ +     M ++W     + I  +G N+F+ KF +   K  IM  
Sbjct: 37  LAGCLVGKVLHTREVSIEGLKMAMQRVWRTSREVKIEKLGENVFMFKFGSEVDKRSIMVG 96

Query: 102 GPWFFDKAMILMEEPKGDNCGEEKDFRYVSFWTHFHKLPFACFSRDAAMEIGSFLGKVEH 161
           GPW FD+A+I + EP G    +++DF +VSFW   H +P  C S+D A E+G  +GKVE 
Sbjct: 97  GPWHFDRALIGLTEPTGIGDIKKQDFSHVSFWVQIHDVPIMCMSKDMAAELGKVIGKVEE 156

Query: 162 IDLGKEKEQQWKSSLRIKIQIEVNMPLKRGIFLKSERGN-NDRWIKVTYEKLSDFCYGCG 221
           ++     E  +   LR++I +++  PLK+ I L+ E  + +D  ++V YE+L DFC+ CG
Sbjct: 157 VETDAAGE-CFGQFLRLRISVDITKPLKKIIELEQEEEDADDIPMRVMYERLPDFCFCCG 216

Query: 222 LLGHTLKECGEDCGSNEDELPYGSWLREPTRLLSYDYTPTDIVDGYGRGRGRGR 274
            +GH  +EC      ++DEL YG WL+  T           + +   +GRGR R
Sbjct: 217 RIGHQYRECFYYKSQSKDELAYGPWLKANT-----------VAEKLKQGRGRDR 258

BLAST of Lag0021783 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 52.8 bits (125), Expect = 9.6e-07
Identity = 30/141 (21.28%), Postives = 52/141 (36.88%), Query Frame = 0

Query: 88  FRNARVKGKIMEDGPWFFDKAMILMEEPKGDNCGEEKDFRYVSFWTHFHKLPFACFSRDA 147
           F++      I+  GPW F+  M +++  +      + +F+ + FW     +P    +   
Sbjct: 66  FQSEESMFSILRRGPWSFNDWMCVIQ--RWTKLHSDAEFKRIPFWIQIRGIPLRFLTARI 125

Query: 148 AMEIGSFLGKVEHIDLGKEKEQQWKSSLRIKIQIEVNMPLKRGIFLKSERGNNDRWIKVT 207
              IG                                   + G+FL++  G +   +K  
Sbjct: 126 ITSIGE----------------------------------RMGLFLETNLGRDVSVLKFQ 170

Query: 208 YEKLSDFCYGCGLLGHTLKEC 229
           YEKL +FC  CG+L H   EC
Sbjct: 186 YEKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_015380691.17.8e-3533.98uncharacterized protein LOC107174364 [Citrus sinensis][more]
TXG72737.11.7e-3437.22hypothetical protein EZV62_001316 [Acer yangbiense][more]
XP_024033132.13.9e-3431.82uncharacterized protein LOC112095437 [Citrus clementina][more]
XP_022149484.11.1e-3332.80uncharacterized protein LOC111017902 [Momordica charantia][more]
XP_024042073.11.5e-3330.17uncharacterized protein LOC112099188 [Citrus clementina][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5C7ITT08.4e-3537.22Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001316 PE=4 SV=1[more]
A0A6J1D7655.5e-3432.80uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A5C7GU646.0e-3328.87CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02748... [more]
A0A5E4G0346.0e-3332.19PREDICTED: DUF4283 domain-containing OS=Prunus dulcis OX=3755 GN=ALMOND_2B021569... [more]
A0A1S8AC251.3e-3233.76CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G42140.19.6e-0721.28zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 183..228
e-value: 6.8E-11
score: 41.7
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 35..179
e-value: 4.1E-19
score: 68.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 427..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 427..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..477
NoneNo IPR availablePANTHERPTHR31286:SF62SUBFAMILY NOT NAMEDcoord: 48..454
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 48..454
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 215..228
score: 8.828579

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0021783.1Lag0021783.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding