Lag0021734 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0021734
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr7: 11283743 .. 11284714 (+)
RNA-Seq ExpressionLag0021734
SyntenyLag0021734
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGCCCCGCCGGACGCCATGAAAATATTAAGCTGGAACATTCGGGGATTGGGGAATCCCCAAACGCTCCGAGCACTTCGACATGTGATCAGAAGTGAAAATCCCCAAATTGTGTTTTTGCTTGAATCAAAGAGTGATACCAGAATTGAGACAAAATTGAAGAGAGTCCTGGAGTTCGAAAATTGTTTCAGTGTCCCGAGCAAAGGGAACAGTGGCGGGCTAGTGCTTTTATGGAAAAAGGAGGTTAATATCAATATTAACTCCTTTTCTATGGGGCACATTGACAGTACGGTTCTGGAAGACTTTATGAGTTGGAGGTTCACAGGTTTTTACGGAAATCATAATCCAGCTAAGAGAGAGGAGTCATGGACCTTACTGAGAAGGATCTATGACAATATGAGCGCGGATTCCCCTTGGATAGTTGGAGGGGACCTTAATGAGATTATGTTTAATCACGAAAAGAGTGGAGGTGCCGAGAGGAGTGTGGGCGCCATGGTAAGATTCCGGGACACTATTAATCACTGCAACCTGTTGGATCAAGGTTTCAGTGGCAACAAATTTACTTGGTTCAGAGGGAAATCCAAGAAGAACCGAATCCTTGAGAGGCTGGACCGATTTTTAATAAACTTCCCTATGCAGTCCAAGACTAATAACATCAAGATTAAGCATCTTAGATACCACAACTCAGACCACAAACCAATCCTGGCTGAGCTGACTTTCGGGGTCCTAAGGCAAAATAAGGGTAGCAGGAGCAAGCTTTTGAAATTCGAAGAAGGTTGGGTTAAGCACGAGGAAACGAAGACTATCATAAAGGAGAGCTGGAGCAACCCAAATACTGGAAACACTCACCAATGGGAGAAGAGATCTGCCTCTTGTCTTAGGAAGCTTCGTGAGTGGAACAAAAACCGCCTTGGAGGATCTATCCAAAGAGCGATTGACAGAAAAGAGAAAGAGATCATGGAGCTTTAG

mRNA sequence

ATGCCAGCCCCGCCGGACGCCATGAAAATATTAAGCTGGAACATTCGGGGATTGGGGAATCCCCAAACGCTCCGAGCACTTCGACATGTGATCAGAAGTGAAAATCCCCAAATTGTGTTTTTGCTTGAATCAAAGAGTGATACCAGAATTGAGACAAAATTGAAGAGAGTCCTGGAGTTCGAAAATTGTTTCAGTGTCCCGAGCAAAGGGAACAGTGGCGGGCTAGTGCTTTTATGGAAAAAGGAGGTTAATATCAATATTAACTCCTTTTCTATGGGGCACATTGACAGTACGGTTCTGGAAGACTTTATGAGTTGGAGGTTCACAGGTTTTTACGGAAATCATAATCCAGCTAAGAGAGAGGAGTCATGGACCTTACTGAGAAGGATCTATGACAATATGAGCGCGGATTCCCCTTGGATAGTTGGAGGGGACCTTAATGAGATTATGTTTAATCACGAAAAGAGTGGAGGTGCCGAGAGGAGTGTGGGCGCCATGGTAAGATTCCGGGACACTATTAATCACTGCAACCTGTTGGATCAAGGTTTCAGTGGCAACAAATTTACTTGGTTCAGAGGGAAATCCAAGAAGAACCGAATCCTTGAGAGGCTGGACCGATTTTTAATAAACTTCCCTATGCAGTCCAAGACTAATAACATCAAGATTAAGCATCTTAGATACCACAACTCAGACCACAAACCAATCCTGGCTGAGCTGACTTTCGGGGTCCTAAGGCAAAATAAGGGTAGCAGGAGCAAGCTTTTGAAATTCGAAGAAGGTTGGGTTAAGCACGAGGAAACGAAGACTATCATAAAGGAGAGCTGGAGCAACCCAAATACTGGAAACACTCACCAATGGGAGAAGAGATCTGCCTCTTGTCTTAGGAAGCTTCGTGAGTGGAACAAAAACCGCCTTGGAGGATCTATCCAAAGAGCGATTGACAGAAAAGAGAAAGAGATCATGGAGCTTTAG

Coding sequence (CDS)

ATGCCAGCCCCGCCGGACGCCATGAAAATATTAAGCTGGAACATTCGGGGATTGGGGAATCCCCAAACGCTCCGAGCACTTCGACATGTGATCAGAAGTGAAAATCCCCAAATTGTGTTTTTGCTTGAATCAAAGAGTGATACCAGAATTGAGACAAAATTGAAGAGAGTCCTGGAGTTCGAAAATTGTTTCAGTGTCCCGAGCAAAGGGAACAGTGGCGGGCTAGTGCTTTTATGGAAAAAGGAGGTTAATATCAATATTAACTCCTTTTCTATGGGGCACATTGACAGTACGGTTCTGGAAGACTTTATGAGTTGGAGGTTCACAGGTTTTTACGGAAATCATAATCCAGCTAAGAGAGAGGAGTCATGGACCTTACTGAGAAGGATCTATGACAATATGAGCGCGGATTCCCCTTGGATAGTTGGAGGGGACCTTAATGAGATTATGTTTAATCACGAAAAGAGTGGAGGTGCCGAGAGGAGTGTGGGCGCCATGGTAAGATTCCGGGACACTATTAATCACTGCAACCTGTTGGATCAAGGTTTCAGTGGCAACAAATTTACTTGGTTCAGAGGGAAATCCAAGAAGAACCGAATCCTTGAGAGGCTGGACCGATTTTTAATAAACTTCCCTATGCAGTCCAAGACTAATAACATCAAGATTAAGCATCTTAGATACCACAACTCAGACCACAAACCAATCCTGGCTGAGCTGACTTTCGGGGTCCTAAGGCAAAATAAGGGTAGCAGGAGCAAGCTTTTGAAATTCGAAGAAGGTTGGGTTAAGCACGAGGAAACGAAGACTATCATAAAGGAGAGCTGGAGCAACCCAAATACTGGAAACACTCACCAATGGGAGAAGAGATCTGCCTCTTGTCTTAGGAAGCTTCGTGAGTGGAACAAAAACCGCCTTGGAGGATCTATCCAAAGAGCGATTGACAGAAAAGAGAAAGAGATCATGGAGCTTTAG

Protein sequence

MPAPPDAMKILSWNIRGLGNPQTLRALRHVIRSENPQIVFLLESKSDTRIETKLKRVLEFENCFSVPSKGNSGGLVLLWKKEVNININSFSMGHIDSTVLEDFMSWRFTGFYGNHNPAKREESWTLLRRIYDNMSADSPWIVGGDLNEIMFNHEKSGGAERSVGAMVRFRDTINHCNLLDQGFSGNKFTWFRGKSKKNRILERLDRFLINFPMQSKTNNIKIKHLRYHNSDHKPILAELTFGVLRQNKGSRSKLLKFEEGWVKHEETKTIIKESWSNPNTGNTHQWEKRSASCLRKLREWNKNRLGGSIQRAIDRKEKEIMEL
Homology
BLAST of Lag0021734 vs. NCBI nr
Match: XP_022157437.1 (uncharacterized protein LOC111024135 [Momordica charantia])

HSP 1 Score: 237.3 bits (604), Expect = 1.9e-58
Identity = 134/316 (42.41%), Postives = 177/316 (56.01%), Query Frame = 0

Query: 8   MKILSWNIRGLGNPQTLRALRHVIRSENPQIVFLLESKSDTRIETKLKRVLEFENCFSVP 67
           MK L WN+ GLGNP T R LR+++R   PQ+VFL E+K +  +E + KR L F+ C SV 
Sbjct: 1   MKSLCWNVPGLGNPDTFRTLRNLVRRSQPQLVFLSETKGNPTLEGRAKRELSFDCCVSVA 60

Query: 68  SKGNSGGLVLLWKKEVNININSFSMGHIDSTVLEDFMSWRFTGFYGNHNPAKREESWTLL 127
           S G SGGL+LLW  + N+ I S S GHIDS + + + SWRFTGFYGN    KR  SW LL
Sbjct: 61  STGKSGGLMLLWNSDSNVRIQSMSPGHIDSIITDKYGSWRFTGFYGNPCTYKRSASWKLL 120

Query: 128 RRIYDNMSADSPWIVGGDLNEIMFNHEKSGGAERSVGAMVRFRDTINHCNLLDQGFSGNK 187
            R+   M  D PWI+GGD NEI+   EK GG  R+   M                     
Sbjct: 121 ERLARMM--DLPWIIGGDFNEIVSMTEKMGGVCRNESQM--------------------- 180

Query: 188 FTWFRGKSKKNRILERLDRFLINFPMQSKTNNIKIKHLRYHNSDHKPILAELTFGVLRQN 247
               RG      I ERLDRFLIN  M +K  N+K+ HL   +SDH+PILA   F + R  
Sbjct: 181 ----RGCP----IWERLDRFLINESMLNKCLNLKVTHLELLSSDHRPILASWDFELPRAW 240

Query: 248 KGSRSKLLKFEEGWVKHEETKTIIKESWSNPNTGNTHQWEKRSASCLRKLREWNKNRLGG 307
              + + ++FEE W++ +  + II  +W +        ++ +  SCL +L EWNK RL  
Sbjct: 241 TCHKQRKIRFEESWLQIDGCRDIITGTWGSLPGIGIEAFQAKICSCLSRLNEWNKIRLNR 285

Query: 308 SIQRAIDRKEKEIMEL 324
           S++ AI  KEKE+  L
Sbjct: 301 SLKGAIAYKEKELERL 285

BLAST of Lag0021734 vs. NCBI nr
Match: KAF5449841.1 (hypothetical protein F2P56_030246 [Juglans regia])

HSP 1 Score: 229.6 bits (584), Expect = 3.9e-56
Identity = 126/301 (41.86%), Postives = 167/301 (55.48%), Query Frame = 0

Query: 8   MKILSWNIRGLGNPQTLRALRHVIRSENPQIVFLLESKSDTRIETKLKRVLEFENCFSVP 67
           MKIL WN  GLGNPQ +RALR +I  E+P +VFL E+K   +  T  K    F NCF V 
Sbjct: 1   MKILCWNSSGLGNPQGIRALRDLITREDPDLVFLQETKMRAQAMTTCKYKFGFVNCFFVD 60

Query: 68  SKGNSGGLVLLWKKEVNININSFSMGHIDSTVLE-DFMSWRFTGFYGNHNPAKREESWTL 127
             G SGGL LLWK+E++++I+SFS  HID+ + E D   WRFTG YG+ + + R  +W L
Sbjct: 61  CVGRSGGLSLLWKREISVSISSFSRYHIDACIQESDLAEWRFTGVYGHPDASNRYLTWNL 120

Query: 128 LRRIYDNMSADSPWIVGGDLNEIMFNHEKSGGAERSVGAMVRFRDTINHCNLLDQGFSGN 187
           +R +    S   PW+VGGD NE+++ HEK GG       +  FR  +  C L D GF G 
Sbjct: 121 MRTLCP--STSGPWLVGGDFNEVLYLHEKRGGRPWPYAQLENFRAVMEDCALQDLGFQGP 180

Query: 188 KFTWFRGKSKKNRILERLDRFLINFPMQSKTNNIKIKHLRYHNSDHKPILAELTFGVLRQ 247
           +FTW  G++   RI ERLDRF  N  +       +++H     SDH PIL E    ++R 
Sbjct: 181 RFTWCNGRTGIQRISERLDRFFGNQQLWEVFPKERVRHGVITYSDHLPILFETGLPLIR- 240

Query: 248 NKGSRSKLLKFEEGWVKHEETKTIIKESW-SNPNTGNTHQWEKRSASCLRKLREWNKNRL 307
             G   K  +FE  WV  E+   II+  W S  N+ N     K    C +KL  WNK+  
Sbjct: 241 --GKHPKKFRFEVMWVGEEKCAQIIEREWGSARNSNNMEVVSKLIKGCGKKLAVWNKSSF 296

BLAST of Lag0021734 vs. NCBI nr
Match: KAG2663507.1 (hypothetical protein I3760_16G033000 [Carya illinoinensis])

HSP 1 Score: 229.6 bits (584), Expect = 3.9e-56
Identity = 127/320 (39.69%), Postives = 179/320 (55.94%), Query Frame = 0

Query: 3   APPDAMKILSWNIRGLGNPQTLRALRHVIRSENPQIVFLLESKSDTRIETKLKRVLEFEN 62
           A P  M ++SWN RGLGNP  ++AL  ++RS+ P I+FL E+K + R+  ++K  L F+N
Sbjct: 440 ALPGTMSLISWNSRGLGNPVGVQALSDLVRSKAPDILFLQETKLNARVMERMKYQLGFKN 499

Query: 63  CFSVPSKGNSGGLVLLWKKEVNININSFSMGHIDSTVLED---FMSWRFTGFYGNHNPAK 122
           C +V  +G SGG+ L W     + I +FS  HI + V E+      W  TGFYGN + +K
Sbjct: 500 CLAVSCEGKSGGIALFWNNRFKVEIQTFSKFHIHAKVTEEEENVEPWWLTGFYGNSDVSK 559

Query: 123 REESWTLLRRIYDNMSADSPWIVGGDLNEIMFNHEKSGGAERSVGAMVRFRDTINHCNLL 182
           R ESW LLR +   + +D  W++ GD NEI+ N EKSGG ++S   M  FRD I+ C+L 
Sbjct: 560 RHESWNLLRTLL--VPSDKGWLILGDFNEILSNAEKSGGRDKSERQMKAFRDVIDECHLH 619

Query: 183 DQGFSGNKFTWFRGKSKKNRILERLDRFLINFPMQSKTNNIKIKHLRYHNSDHKPILAEL 242
           D GF+GN FTW   + + + I ERLDRFL N    S      + H     SDH PI+ +L
Sbjct: 620 DLGFNGNPFTWCNRRERAHCISERLDRFLSNLKWHSFYPMASVIHGVIAYSDHVPIMLKL 679

Query: 243 TFGVLRQNKGSRSKLLKFEEGWVKHEETKTIIKESWSNPNTGNTHQWEKRSAS-CLRKLR 302
           T G +   +G R KL +FE  WV   + K +I+++W             R    C  KL 
Sbjct: 680 TAGSV---QGPRKKLFRFEAMWVDATDCKQVIQDAWRGVEGRKDLSIVMRKIQHCGEKLT 739

Query: 303 EWNKNRLG---GSIQRAIDR 316
            WNK   G    ++++A DR
Sbjct: 740 VWNKTNFGHVQRNLKKAKDR 754

BLAST of Lag0021734 vs. NCBI nr
Match: XP_028075737.1 (uncharacterized protein LOC114277953 [Camellia sinensis])

HSP 1 Score: 227.6 bits (579), Expect = 1.5e-55
Identity = 124/299 (41.47%), Postives = 173/299 (57.86%), Query Frame = 0

Query: 8   MKILSWNIRGLGNPQTLRALRHVIRSENPQIVFLLESKSDTRIETKLKRVLEFENCFSVP 67
           MKIL WN RGLGNP+T+R L+ +++ E P +VFL+E+K D R   +++  L  + CF+V 
Sbjct: 1   MKILCWNCRGLGNPRTVRFLQLLLKKEVPTMVFLVETKLDARAMERIRCKLGLQRCFTVD 60

Query: 68  SKGNSGGLVLLWKKEVNININSFSMGHIDSTVLED--FMSWRFTGFYGNHNPAKREESWT 127
             G SGGL LLW  E+ + I SFS GH+DS +L +    SW FTGFYGN   + R +SW 
Sbjct: 61  RVGLSGGLALLWVGEIQLQIKSFSRGHVDSIILSESGVASWCFTGFYGNPIASLRSDSWE 120

Query: 128 LLRRIYDNMSADSPWIVGGDLNEIMFNHEKSGGAERSVGAMVRFRDTINHCNLLDQGFSG 187
           LLRR+ D M    PW+  GD NEI++ HEKSG A RS   M  FR  ++ C+L D GF G
Sbjct: 121 LLRRLQDQMHL--PWLCAGDFNEILYAHEKSGMAARSQRQMDGFRQVLSDCDLADLGFEG 180

Query: 188 NKFTWFRGKSKKNRILERLDRFLINFPMQSKTNNIKIKHLRYHNSDHKPILAELTFGVLR 247
             FTW  G++    I ERLDR ++N    +     ++ HL   +SDH PIL +L  GV  
Sbjct: 181 AAFTWCNGRAGDGMIRERLDRCVVNERWLNSFPMARVYHLGGTSSDHLPILLDLE-GVKA 240

Query: 248 Q--NKGSRSKLLKFEEGWVKHEETKTIIKESW-SNPNTGNTHQWEKRSASCLRKLREWN 302
           Q  ++    KL +FE  W++ E+ + II   W  + N         +  +   +L+ WN
Sbjct: 241 QMAHRPKYRKLYRFEAMWLREEDCEGIITREWHQDSNLSGVELVSGKLRAVASQLQAWN 296

BLAST of Lag0021734 vs. NCBI nr
Match: XP_042951290.1 (uncharacterized protein LOC122285342 [Carya illinoinensis])

HSP 1 Score: 224.9 bits (572), Expect = 9.7e-55
Identity = 124/317 (39.12%), Postives = 178/317 (56.15%), Query Frame = 0

Query: 8   MKILSWNIRGLGNPQTLRALRHVIRSENPQIVFLLESKSDTRIETKLKRVLEFENCFSVP 67
           M ++SWN RGLGNP  ++AL  ++RS+ P I+FL E+K + R+  ++K  L F+NC +V 
Sbjct: 1   MSLISWNSRGLGNPVGVQALSDLVRSKVPDILFLQETKLNARVMERMKYKLGFQNCLAVS 60

Query: 68  SKGNSGGLVLLWKKEVNININSFSMGHIDSTVLED---FMSWRFTGFYGNHNPAKREESW 127
            +G SGG+ L W     + I +FS  HI + V E+     SW  TGFYGN + +KR ESW
Sbjct: 61  CEGRSGGIALFWNNRFKVEIQTFSKFHIHAKVTEEEENVESWCLTGFYGNPDVSKRHESW 120

Query: 128 TLLRRIYDNMSADSPWIVGGDLNEIMFNHEKSGGAERSVGAMVRFRDTINHCNLLDQGFS 187
            LL  +   + +D  W+V GD NEI+ N EKSGG ++    M  FRD I+ C+L D GF+
Sbjct: 121 NLLTTLL--VPSDKGWLVLGDFNEILSNAEKSGGRDKPERQMKAFRDVIDECHLQDLGFN 180

Query: 188 GNKFTWFRGKSKKNRILERLDRFLINFPMQSKTNNIKIKHLRYHNSDHKPILAELTFGVL 247
           GN FTW   + + + I ERLDRFL N    S      + H     SDH PI+ +LT G +
Sbjct: 181 GNPFTWCNRRERAHCISERLDRFLSNLKWHSFYPMASVIHGVIAYSDHVPIMLKLTAGSV 240

Query: 248 RQNKGSRSKLLKFEEGWVKHEETKTIIKESWSNPNTGNTHQWEKRSAS-CLRKLREWNKN 307
              +G R KL +FE  WV   + K +I+++W             R    C  KL  WNK 
Sbjct: 241 ---QGPRKKLFRFEAMWVDATDCKQVIQDAWRGVEGRKDLSIVMRKIQHCGEKLTVWNKT 300

Query: 308 RLGGSIQRAIDRKEKEI 321
            + G +QR + + + ++
Sbjct: 301 -IFGHVQRNLKKAKDQL 311

BLAST of Lag0021734 vs. ExPASy TrEMBL
Match: A0A6J1DUG8 (uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024135 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 9.1e-59
Identity = 134/316 (42.41%), Postives = 177/316 (56.01%), Query Frame = 0

Query: 8   MKILSWNIRGLGNPQTLRALRHVIRSENPQIVFLLESKSDTRIETKLKRVLEFENCFSVP 67
           MK L WN+ GLGNP T R LR+++R   PQ+VFL E+K +  +E + KR L F+ C SV 
Sbjct: 1   MKSLCWNVPGLGNPDTFRTLRNLVRRSQPQLVFLSETKGNPTLEGRAKRELSFDCCVSVA 60

Query: 68  SKGNSGGLVLLWKKEVNININSFSMGHIDSTVLEDFMSWRFTGFYGNHNPAKREESWTLL 127
           S G SGGL+LLW  + N+ I S S GHIDS + + + SWRFTGFYGN    KR  SW LL
Sbjct: 61  STGKSGGLMLLWNSDSNVRIQSMSPGHIDSIITDKYGSWRFTGFYGNPCTYKRSASWKLL 120

Query: 128 RRIYDNMSADSPWIVGGDLNEIMFNHEKSGGAERSVGAMVRFRDTINHCNLLDQGFSGNK 187
            R+   M  D PWI+GGD NEI+   EK GG  R+   M                     
Sbjct: 121 ERLARMM--DLPWIIGGDFNEIVSMTEKMGGVCRNESQM--------------------- 180

Query: 188 FTWFRGKSKKNRILERLDRFLINFPMQSKTNNIKIKHLRYHNSDHKPILAELTFGVLRQN 247
               RG      I ERLDRFLIN  M +K  N+K+ HL   +SDH+PILA   F + R  
Sbjct: 181 ----RGCP----IWERLDRFLINESMLNKCLNLKVTHLELLSSDHRPILASWDFELPRAW 240

Query: 248 KGSRSKLLKFEEGWVKHEETKTIIKESWSNPNTGNTHQWEKRSASCLRKLREWNKNRLGG 307
              + + ++FEE W++ +  + II  +W +        ++ +  SCL +L EWNK RL  
Sbjct: 241 TCHKQRKIRFEESWLQIDGCRDIITGTWGSLPGIGIEAFQAKICSCLSRLNEWNKIRLNR 285

Query: 308 SIQRAIDRKEKEIMEL 324
           S++ AI  KEKE+  L
Sbjct: 301 SLKGAIAYKEKELERL 285

BLAST of Lag0021734 vs. ExPASy TrEMBL
Match: A0A803NFM8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.4e-54
Identity = 117/321 (36.45%), Postives = 182/321 (56.70%), Query Frame = 0

Query: 4   PPDAMKILSWNIRGLGNPQTLRALRHVIRSENPQIVFLLESKSDTRIETKLKRVLEFENC 63
           P  AMKI+SWN RGLGN + +R LR +++ ++P ++F++E+K      +  + +L F N 
Sbjct: 385 PRAAMKIVSWNARGLGNQRAIRKLRLLVKEQSPTVLFIMETKLACNSISHFRSILNFNNG 444

Query: 64  FSVPSKGNSGGLVLLWKKEVNININSFSMGHIDSTV-LEDFMSWRFTGFYGNHNPAKREE 123
             VP  G SGGL+LLWK +V++++N+F++   D  +   +  SW FT FYG  + + R  
Sbjct: 445 LEVPRVGLSGGLMLLWKDDVDVSLNNFNVNVFDCYMSCNNGPSWHFTAFYGAPSLSNRGV 504

Query: 124 SWTLLRRIYDNMSADSPWIVGGDLNEIMFNHEKSGGAERSVGAMVRFRDTINHCNLLDQG 183
           +WTLL+R+ D ++   PW+V GD NEI+++H K GG  RS   M  FR  ++ C L +  
Sbjct: 505 TWTLLKRLKD-IAPLLPWMVIGDFNEILYSHNKQGGNLRSANQMDEFRSVLDSCQLNELP 564

Query: 184 FSGNKFTWFRGKSKKNRILERLDRFLINFPMQSKTNNIKIKHLRYHNSDHKPILAELTFG 243
           F+G+ FTW +G+   + I ERLD    N    S    +   HL Y +SDH+ I   +   
Sbjct: 565 FNGDPFTWIKGRHNVDTIKERLDWCFTNNSWTSHFQPLVTSHLDYFSSDHRAIAVNIIEH 624

Query: 244 VLRQNKGSRSKLLKFEEGWVKHEETKTIIKESWSNPNTGNTHQWEKRSASCLRKLREWNK 303
              Q    R    +FE+ W+K  E  TII+ESWS  N GN   +     SC   L++W+ 
Sbjct: 625 GSNQTSPHRITRFRFEKMWLKDAEAATIIRESWSEDNAGNISGFLNNLTSCTDALQQWHF 684

Query: 304 NRLGGSIQRAIDRKEKEIMEL 324
           ++  G ++R I + +K +  L
Sbjct: 685 HKF-GRMKRDITQLQKSVAAL 703

BLAST of Lag0021734 vs. ExPASy TrEMBL
Match: A0A2N9HDH5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37541 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.3e-54
Identity = 122/303 (40.26%), Postives = 173/303 (57.10%), Query Frame = 0

Query: 3   APPDAMKILSWNIRGLGNPQTLRALRHVIRSENPQIVFLLESKSDTRIETKLKRVLEFEN 62
           APP  M I+SWN RGLGN + + AL ++++S+ P+I+FL+E+K D R    ++  L F+ 
Sbjct: 458 APPHPMNIISWNCRGLGNHRAVLALHNLVKSQGPKILFLMETKLDVRKMEFIRVKLRFKF 517

Query: 63  CFSVPSKGNSGGLVLLWKKEVNININSFSMGHIDSTV-LEDFMSWRFTGFYGNHNPAKRE 122
           CF+VPS G SGGL LLW  +V + I +FS+ HID+ V L+  + WRFTGFYGN    +R 
Sbjct: 518 CFTVPSLGRSGGLALLWNDDVQLTIQNFSINHIDAQVCLQGALLWRFTGFYGNPIAHRRR 577

Query: 123 ESWTLLRRIYDNMSADSPWIVGGDLNEIMFNHEKSGGAERSVGAMVRFRDTINHCNLLDQ 182
            SW LL ++   MS   PW++ GD NEI+ + E+SG A  S  +M  F + INHC L+D 
Sbjct: 578 GSWALLDKLDSMMSL--PWLLMGDFNEILSSDERSGEAAGSQRSMFEFGEVINHCGLVDL 637

Query: 183 GFSGNKFTWFRGKSKKNRILERLDRFLINFPMQSKTNNIKIKHLRYHNSDHKPILAELTF 242
           G+ G  FTW  G+  +  + +RLDR L +    S      I HL+   SDH PIL     
Sbjct: 638 GYRGFPFTWENGREAEAFVQKRLDRALASNSWMSLFPLCTIFHLQSSYSDHVPILLHTDL 697

Query: 243 GVLRQNKGSRSKLLKFEEGWVKHEETKTIIKESWSNPNTGNTHQWE--KRSASCLRKLRE 302
           G  R     + +  KFEE W  H E + II++ W   N   +  +   ++   C  +L  
Sbjct: 698 G--RDQACRKRRPRKFEEKWSLHPECEKIIQKVWDQVNVEGSPMFVVCEKIKQCREELFR 756

BLAST of Lag0021734 vs. ExPASy TrEMBL
Match: A0A2N9GLL3 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31219 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.3e-54
Identity = 118/306 (38.56%), Postives = 173/306 (56.54%), Query Frame = 0

Query: 3   APPDAMKILSWNIRGLGNPQTLRALRHVIRSENPQIVFLLESKSDTRIETKLKRVLEFEN 62
           APP  M+++SWN RGLGN +T+R L H++RS+ P ++FL+E+KSD    T +K  L F N
Sbjct: 398 APPVPMRLISWNCRGLGNHRTIRTLHHLVRSKAPSVLFLMETKSDVTRMTTIKINLGFHN 457

Query: 63  CFSVPSKGNSGGLVLLWKKEVNININSFSMGHIDSTVLED-FMSWRFTGFYGNHNPAKRE 122
              VPS G SGG+ L+WK+EV++ I ++S+ HID+ + ++  +SWR TGFYG    + + 
Sbjct: 458 ALIVPSLGRSGGVALMWKEEVDLVIQNYSLFHIDAYIQQNGSLSWRVTGFYGRPEASMKP 517

Query: 123 ESWTLLRRIYDNMSADSPWIVGGDLNEIMFNHEKSGGAERSVGAMVRFRDTINHCNLLDQ 182
           ESW LLR  Y     + PW+  GD NEI+   EK G   R +  M+ FR+ +N C L+D 
Sbjct: 518 ESWRLLR--YLGSLGNLPWLCLGDFNEILTQSEKRGRHMRPLQRMMDFREALNDCLLIDM 577

Query: 183 GFSGNKFTWFRGKSKKNRILERLDRFLINFPMQSKTNNIKIKHLRYHNSDHKPILAELTF 242
           G+ G  FTW   +     + E LDR + +    S  N   + H+    SDH  +L E+  
Sbjct: 578 GYRGVPFTWDNNRDADENVQEHLDRAVASLSWLSHFNGSLVHHVPTSRSDHVALLVEI-- 637

Query: 243 GVLRQNKGSRSKLLKFEEGWVKHEETKTIIKESW----SNPNTGN-THQWEKRSASCLRK 302
           G L      R +L KFEE W   EE + +I+ +W     +P  G+  +   ++   C  K
Sbjct: 638 GTLSSQNPRRKRLQKFEEKWATSEECEEVIRSAWDSSIQDPLQGSPMYCLVEKIKLCRSK 697

BLAST of Lag0021734 vs. ExPASy TrEMBL
Match: A0A2N9EEH0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1027 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.0e-54
Identity = 117/316 (37.03%), Postives = 181/316 (57.28%), Query Frame = 0

Query: 2   PAPPDAMKILSWNIRGLGNPQTLRALRHVIRSENPQIVFLLESKSDTRIETKLKRVLEFE 61
           P PP +M +LS N RGLGNPQT+R L  +++ + P +VFL+E++ + +    L+  L   
Sbjct: 467 PTPPGSMSLLSVNCRGLGNPQTVRELHDLVKHKAPGVVFLIETRLELKNLEVLRIKLGMH 526

Query: 62  NCFSVPSKGNSGGLVLLWKKEVNININSFSMGHIDSTVLE-DFMSWRFTGFYGNHNPAKR 121
               V   G  GGL LLWKKEV   I+S S+GHID+T++      W FTGFYGN   +KR
Sbjct: 527 GAVGVERTGTGGGLALLWKKEVQTTIHSHSVGHIDATLVTWGSQEWHFTGFYGNPETSKR 586

Query: 122 EESWTLLRRIYDNMSADSPWIVGGDLNEIMFNHEKSGGAERSVGAMVRFRDTINHCNLLD 181
            +SWTLLRR+    + D PW+V GD NEI+   EK+G  ER+   M  FR  ++ C L D
Sbjct: 587 RDSWTLLRRL--QRTDDMPWMVIGDFNEILERDEKTGKIERNWQQMEDFRQVLSDCVLRD 646

Query: 182 QGFSGNKFTWFRGKSKKNRILERLDRFLINFPMQSKTNNIKIKHLRYHNSDHKPILAELT 241
            GF GN++TW+ G+   + + ERLDR + +        N K+K++ + NSDH+ ++ EL 
Sbjct: 647 MGFQGNRYTWWNGRYAADCVYERLDRGVCSAEWNILFPNAKLKYIPFSNSDHEAVMVEL- 706

Query: 242 FGVLRQNKGSRSKLLKFEEGWVKHEETKTIIKESWSNPNTGN-THQWEKRSASCLRKLRE 301
              +      + K  +FE  W++ E  + +I  +W    +G+  +Q  ++  +C   L +
Sbjct: 707 -NPIGDKNKLKPKRFQFEAAWLQIEGCEDVIATAWKTSYSGHLMYQVSQKIKACRLALLK 766

Query: 302 WNKNRLGGSIQRAIDR 316
           W+ N  G S +  +++
Sbjct: 767 WS-NHCGRSTKHKVEK 777

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022157437.11.9e-5842.41uncharacterized protein LOC111024135 [Momordica charantia][more]
KAF5449841.13.9e-5641.86hypothetical protein F2P56_030246 [Juglans regia][more]
KAG2663507.13.9e-5639.69hypothetical protein I3760_16G033000 [Carya illinoinensis][more]
XP_028075737.11.5e-5541.47uncharacterized protein LOC114277953 [Camellia sinensis][more]
XP_042951290.19.7e-5539.12uncharacterized protein LOC122285342 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DUG89.1e-5942.41uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A803NFM81.4e-5436.45Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2N9HDH52.3e-5440.26Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37541 PE=3 SV=1[more]
A0A2N9GLL32.3e-5438.56Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9EEH03.0e-5437.03Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1027 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 309..323
NoneNo IPR availablePANTHERPTHR33116:SF39RETROTRANSPOSON, UNCLASSIFIED-LIKE PROTEINcoord: 112..320
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 112..320
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 11..148
e-value: 2.3E-6
score: 27.4
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 5..239
e-value: 2.3E-38
score: 134.3
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 4..240

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0021734.1Lag0021734.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity